Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P498T23 Lonicera japonica HOM05D017543 ORTHO05D016894 2.3e-61 238.8 127 100.0
Lj4C507G7 Lonicera japonica HOM05D017543 ORTHO05D016894 4.3e-28 128.3 118 62.7
Lj4P515T11 Lonicera japonica HOM05D017543 ORTHO05D016894 5.3e-26 121.3 108 68.5
Lj4A507T40 Lonicera japonica HOM05D000029 ORTHO05D003879 9.0e-26 120.6 102 63.7
Lj4P499T18 Lonicera japonica HOM05D017543 ORTHO05D235108 1.5e-25 119.8 168 50.0
Lj4A516T35 Lonicera japonica HOM05D000029 ORTHO05D003879 1.3e-21 106.7 95 62.1
CSS0013809 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 1.5e-17 93.2 118 49.2
Oeu030008.1 Olea europaea HOM05D000029 ORTHO05D003879 3.8e-16 88.6 118 41.5
Lj4A509T42 Lonicera japonica HOM05D000029 ORTHO05D003879 7.2e-15 84.3 101 49.5
SGA_v2.0_scaffold149G36603 Striga asiatica HOM05D000029 ORTHO05D003879 1.1e-10 70.5 120 35.0
Dinv08018 Davidia involucrata HOM05D000029 ORTHO05D003879 2.4e-10 69.3 100 45.0
CSS0010817 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 6.9e-10 67.8 99 44.4
CSS0044598 Camellia sinensis var. sinensis HOM05D000029 ORTHO05D003879 6.9e-10 67.8 99 44.4
arahy.Tifrunner.gnm1.ann1.BISG48 Arachis hypogaea HOM05D000029 ORTHO05D003879 9.1e-10 67.4 124 35.5
arahy.Tifrunner.gnm1.ann1.TX2FLU Arachis hypogaea HOM05D000029 ORTHO05D003879 1.5e-09 66.6 120 35.8
Atru.chr13.1802 Acer truncatum HOM05D000029 ORTHO05D003879 5.9e-09 64.7 118 39.0
Ciclev10000182m.g Citrus clementina HOM05D000029 ORTHO05D003879 7.7e-09 64.3 98 42.9
MSTRG.22443 Avicennia marina HOM05D000029 ORTHO05D003879 3.8e-08 62.0 98 37.8
Cfa018196 Carpinus fangiana HOM05D000029 ORTHO05D003879 5.0e-08 61.6 101 35.6
MD10G1047000 Malus domestica HOM05D000029 ORTHO05D003879 5.0e-08 61.6 97 43.3
CiPaw.15G082400 Carya illinoinensis HOM05D000029 ORTHO05D003879 1.4e-07 60.1 118 34.7
Lj4P513T6 Lonicera japonica HOM05D017543 ORTHO05D234480 1.4e-07 60.1 63 57.1
RcHm_v2.0_Chr6g0272091 Rosa chinensis HOM05D000029 ORTHO05D003879 1.4e-07 60.1 118 37.3
FvH4_2g12120 Fragaria vesca HOM05D000029 ORTHO05D003879 1.9e-07 59.7 119 38.7
FAN24G0359 Fragaria x ananassa HOM05D000029 ORTHO05D003879 1.9e-07 59.7 119 38.7
FAN27G1538 Fragaria x ananassa HOM05D000029 ORTHO05D003879 1.9e-07 59.7 119 38.7
Actinidia23329 Actinidia chinensis HOM05D000029 ORTHO05D003879 2.5e-07 59.3 99 39.4
Atru.chr13.1823 Acer truncatum HOM05D000029 ORTHO05D003879 3.2e-07 58.9 99 42.4
QL02p034028 Quercus lobata HOM05D000029 ORTHO05D003879 4.2e-07 58.5 101 35.6
MD05G1041000 Malus domestica HOM05D000029 ORTHO05D003879 7.2e-07 57.8 96 40.6
Carub.0001s3255 Capsella rubella HOM05D000029 ORTHO05D003879 9.4e-07 57.4 119 34.5
Eucgr.F04133 Eucalyptus grandis HOM05D000029 ORTHO05D003879 1.2e-06 57.0 102 39.2
Nitab4.5_0010911g0020 Nicotiana tabacum HOM05D000029 ORTHO05D003879 1.2e-06 57.0 98 39.8
Sopen11g009160 Solanum pennellii HOM05D000029 ORTHO05D003879 2.1e-06 56.2 99 38.4
MD10G1047300 Malus domestica HOM05D000029 ORTHO05D003879 2.7e-06 55.8 98 39.8
PSO170G5730 Papaver somniferum HOM05D000029 ORTHO05D003879 2.7e-06 55.8 101 39.6
Peaxi162Scf00310g00823 Petunia axillaris HOM05D000029 ORTHO05D003879 3.6e-06 55.5 98 40.8
Lalb_Chr19g0129791 Lupinus albus HOM05D000029 ORTHO05D003879 4.7e-06 55.1 102 38.2


User provided reference genes

Program Settings