Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P485T6 Lonicera japonica HOM05D012321 ORTHO05D012493 6.1e-36 153.7 81 100.0
Lj4P488T6 Lonicera japonica HOM05D012321 ORTHO05D012493 1.8e-27 125.6 82 84.1
Lj1P486T7 Lonicera japonica HOM05D012321 ORTHO05D012493 1.5e-18 95.9 82 67.1
Lj1P491T19 Lonicera japonica HOM05D012321 ORTHO05D012493 1.5e-18 95.9 78 69.2
Lj1P488T10 Lonicera japonica HOM05D012321 ORTHO05D012493 2.6e-18 95.1 78 69.2
Lj1P505T14 Lonicera japonica HOM05D012321 ORTHO05D012493 2.9e-17 91.7 60 78.3
Lj4A488T7 Lonicera japonica HOM05D012321 ORTHO05D012493 2.9e-17 91.7 57 87.7
Lju3616P0T7 Lonicera japonica HOM05D012321 ORTHO05D012493 4.9e-17 90.9 60 76.7
Dinv15562 Davidia involucrata HOM05D000312 ORTHO05D000221 7.8e-15 83.6 74 55.4
Lj3A423G37 Lonicera japonica HOM05D012321 ORTHO05D012493 3.0e-14 81.6 82 61.0
Lj3A423G38 Lonicera japonica HOM05D012321 ORTHO05D012493 3.3e-13 78.2 82 61.0
Lj4A129T110 Lonicera japonica HOM05D012321 ORTHO05D012493 4.3e-13 77.8 80 55.0
Lj3A423G34 Lonicera japonica HOM05D012321 ORTHO05D012493 2.8e-12 75.1 82 58.5
CSS0007927 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 8.1e-12 73.6 80 48.8
Lj3A423G35 Lonicera japonica HOM05D012321 ORTHO05D012493 1.1e-11 73.2 82 57.3
CSS0046143 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.8e-11 72.4 80 47.5
Peaxi162Scf00015g00635 Petunia axillaris HOM05D000312 ORTHO05D000221 5.2e-11 70.9 77 50.6
Lsat_1_v5_gn_1_81120 Lactuca sativa HOM05D000312 ORTHO05D000221 1.2e-10 69.7 74 50.0
Nitab4.5_0006592g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 4.4e-10 67.8 74 51.4
HanXRQChr01g0018881 Helianthus annuus HOM05D000312 ORTHO05D000221 7.5e-10 67.0 74 44.6
Lsat_1_v5_gn_1_80360 Lactuca sativa HOM05D000312 ORTHO05D000221 7.5e-10 67.0 77 48.1
Nitab4.5_0012426g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 7.5e-10 67.0 75 44.0
Nitab4.5_0000149g0030 Nicotiana tabacum HOM05D000312 ORTHO05D000221 9.9e-10 66.6 75 46.7
Sopen04g013320 Solanum pennellii HOM05D000004 ORTHO05D000002 6.4e-09 63.9 73 47.9
Peaxi162Scf00003g00089 Petunia axillaris HOM05D000312 ORTHO05D000221 8.3e-09 63.5 79 44.3
Lsat_1_v5_gn_1_81001 Lactuca sativa HOM05D000312 ORTHO05D000221 1.1e-08 63.2 74 41.9
Lsat_1_v5_gn_1_81061 Lactuca sativa HOM05D000312 ORTHO05D012493 1.1e-08 63.2 74 44.6
HanXRQChr01g0019091 Helianthus annuus HOM05D000312 ORTHO05D000221 1.4e-08 62.8 80 40.0
Peaxi162Scf00026g01914 Petunia axillaris HOM05D000312 ORTHO05D000221 1.4e-08 62.8 73 43.8
Rhsim12G0069200 Rhododendron simsii HOM05D000312 ORTHO05D012493 1.4e-08 62.8 71 43.7
PGSC0003DMG400002954 Solanum tuberosum HOM05D000312 ORTHO05D012493 1.4e-08 62.8 75 42.7
Cc11_g11160 Coffea canephora HOM05D000312 ORTHO05D000221 1.9e-08 62.4 71 47.9
HanXRQChr12g0373691 Helianthus annuus HOM05D000312 ORTHO05D000221 1.9e-08 62.4 74 39.2
Nitab4.5_0004688g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.9e-08 62.4 77 44.2
Dinv16565 Davidia involucrata HOM05D000312 ORTHO05D000221 3.2e-08 61.6 78 42.3
Nitab4.5_0004055g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.2e-08 61.6 74 43.2
Nitab4.5_0004294g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.2e-08 61.6 75 45.3
Peaxi162Scf00015g02411 Petunia axillaris HOM05D000312 ORTHO05D000221 3.2e-08 61.6 71 42.3
PGSC0003DMG400047124 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.2e-08 61.6 75 41.3
CSS0048385 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 4.1e-08 61.2 72 48.6
Cc05_g01220 Coffea canephora HOM05D000312 ORTHO05D000221 4.1e-08 61.2 75 45.3
Cc11_g11170 Coffea canephora HOM05D000312 ORTHO05D000221 4.1e-08 61.2 81 44.4
Rhsim12G0069300 Rhododendron simsii HOM05D000312 ORTHO05D000221 4.1e-08 61.2 71 42.3
Nitab4.5_0000914g0270 Nicotiana tabacum HOM05D000312 ORTHO05D000221 5.4e-08 60.8 70 42.9
Solyc11g011230.3 Solanum lycopersicum HOM05D000312 ORTHO05D000221 5.4e-08 60.8 73 47.9
Dinv27407 Davidia involucrata HOM05D000312 ORTHO05D000221 7.1e-08 60.5 72 45.8
Rhsim12G0069100 Rhododendron simsii HOM05D000312 ORTHO05D000221 7.1e-08 60.5 72 41.7
CAN.G1163.6 Capsicum annuum HOM05D000312 ORTHO05D000221 9.2e-08 60.1 74 45.9
HanXRQChr01g0017811 Helianthus annuus HOM05D000312 ORTHO05D000221 9.2e-08 60.1 72 44.4
Nitab4.5_0000149g0040 Nicotiana tabacum HOM05D000312 ORTHO05D000221 9.2e-08 60.1 78 42.3
Nitab4.5_0004294g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.2e-07 59.7 73 46.6
Peaxi162Scf00003g00813 Petunia axillaris HOM05D000312 ORTHO05D000221 1.2e-07 59.7 77 44.2
Dinv16568 Davidia involucrata HOM05D001046 ORTHO05D000221 1.6e-07 59.3 72 45.8
Hma1.2p1_0148F.1_g066000 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.6e-07 59.3 72 44.4
Hma1.2p1_0189F.1_g082900 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 1.6e-07 59.3 72 44.4
Lsat_1_v5_gn_1_81541 Lactuca sativa HOM05D000312 ORTHO05D000221 1.6e-07 59.3 69 44.9
Dinv27405 Davidia involucrata HOM05D000312 ORTHO05D000221 2.1e-07 58.9 72 44.4
CAN.G1217.12 Capsicum annuum HOM05D000312 ORTHO05D000221 2.7e-07 58.5 75 42.7
Nitab4.5_0009122g0020 Nicotiana tabacum HOM05D000312 ORTHO05D020289 2.7e-07 58.5 77 35.1
Dinv34662 Davidia involucrata HOM05D000312 ORTHO05D000221 3.5e-07 58.2 69 46.4
HanXRQChr01g0019081 Helianthus annuus HOM05D000312 ORTHO05D000221 3.5e-07 58.2 74 41.9
Lsat_1_v5_gn_1_81361 Lactuca sativa HOM05D000312 ORTHO05D000221 3.5e-07 58.2 74 41.9
Lsat_1_v5_gn_1_81421 Lactuca sativa HOM05D000312 ORTHO05D012493 3.5e-07 58.2 74 43.2
Dinv15563 Davidia involucrata HOM05D000312 ORTHO05D000221 4.6e-07 57.8 70 47.1
Hma1.2p1_0189F.1_g082810 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 4.6e-07 57.8 72 48.6
Lsat_1_v5_gn_1_75200 Lactuca sativa HOM05D000312 ORTHO05D000221 4.6e-07 57.8 73 43.8
CAN.G184.21 Capsicum annuum HOM05D000312 ORTHO05D011153 6.0e-07 57.4 73 41.1
Nitab4.5_0000259g0210 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.0e-06 56.6 72 36.1
CSS0035521 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 1.3e-06 56.2 74 41.9
CAN.G1602.1 Capsicum annuum HOM05D000312 ORTHO05D000221 1.3e-06 56.2 72 37.5
Sopen04g013290 Solanum pennellii HOM05D000312 ORTHO05D000221 1.3e-06 56.2 73 41.1
CAN.G1339.1 Capsicum annuum HOM05D000312 ORTHO05D000221 1.7e-06 55.8 76 36.8
Dinv16567 Davidia involucrata HOM05D000312 ORTHO05D000221 1.7e-06 55.8 72 41.7
Nitab4.5_0013991g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-06 55.8 72 40.3
Nitab4.5_0015989g0010 Nicotiana tabacum HOM05D000312 ORTHO05D000221 1.7e-06 55.8 72 36.1
Oeu035182.1 Olea europaea HOM05D000312 ORTHO05D000221 1.7e-06 55.8 72 40.3
Thecc.02G317400 Theobroma cacao HOM05D000312 ORTHO05D000221 1.7e-06 55.8 69 43.5
HanXRQChr17g0568471 Helianthus annuus HOM05D000312 ORTHO05D000221 2.3e-06 55.5 68 38.2
Peaxi162Scf00635g00718 Petunia axillaris HOM05D000312 ORTHO05D000221 2.3e-06 55.5 73 43.8
CSS0021406 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.0e-06 55.1 72 44.4
CSS0033318 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.0e-06 55.1 72 44.4
CSS0044173 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 3.0e-06 55.1 72 44.4
Nitab4.5_0000027g0320 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.9e-06 54.7 73 38.4
Nitab4.5_0000913g0170 Nicotiana tabacum HOM05D000312 ORTHO05D000221 3.9e-06 54.7 75 41.3
Peaxi162Scf00179g00627 Petunia axillaris HOM05D000312 ORTHO05D000221 3.9e-06 54.7 72 40.3
PGSC0003DMG400016882 Solanum tuberosum HOM05D000312 ORTHO05D000221 3.9e-06 54.7 79 43.0
PGSC0003DMG400025113 Solanum tuberosum HOM05D000312 ORTHO05D011153 3.9e-06 54.7 72 38.9
CSS0004612 Camellia sinensis var. sinensis HOM05D000312 ORTHO05D000221 5.1e-06 54.3 72 41.7
HanXRQChr01g0019051 Helianthus annuus HOM05D000312 ORTHO05D000221 5.1e-06 54.3 79 38.0
Peaxi162Scf00179g00710 Petunia axillaris HOM05D000312 ORTHO05D000221 5.1e-06 54.3 79 39.2
DCAR_024360 Daucus carota HOM05D000312 ORTHO05D000221 6.6e-06 53.9 70 41.4
Hma1.2p1_0189F.1_g082890 Hydrangea macrophylla HOM05D000312 ORTHO05D000221 6.6e-06 53.9 72 41.7
Nitab4.5_0008981g0020 Nicotiana tabacum HOM05D000312 ORTHO05D000221 6.6e-06 53.9 73 38.4
Rhsim12G0067900 Rhododendron simsii HOM05D000312 ORTHO05D000221 6.6e-06 53.9 72 47.2
Solyc04g079800.4 Solanum lycopersicum HOM05D000312 ORTHO05D000221 6.6e-06 53.9 69 46.4
Sopen04g033380 Solanum pennellii HOM05D000312 ORTHO05D000221 6.6e-06 53.9 69 46.4
PGSC0003DMG400025115 Solanum tuberosum HOM05D000312 ORTHO05D011153 6.6e-06 53.9 73 38.4
TWI31G0361 Tripterygium wilfordii HOM05D000312 ORTHO05D000221 6.6e-06 53.9 73 41.1
CAN.G184.26 Capsicum annuum HOM05D000312 ORTHO05D000221 8.6e-06 53.5 70 41.4
HanXRQChr01g0017111 Helianthus annuus HOM05D000312 ORTHO05D000221 8.6e-06 53.5 79 38.0
Rhsim12G0067700 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.6e-06 53.5 71 45.1
Rhsim12G0069400 Rhododendron simsii HOM05D000312 ORTHO05D000221 8.6e-06 53.5 71 40.8


User provided reference genes

Program Settings