Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P413T11 Lonicera japonica HOM05D000176 ORTHO05D000106 2.6e-71 271.9 135 100.0
Lju1668C0T1 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-33 144.4 124 56.5
Lj1C600T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-32 142.5 112 58.9
Lju470C8G1 Lonicera japonica HOM05D000176 ORTHO05D000106 3.4e-31 138.7 111 57.7
Lj5C240T12 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-31 137.5 112 58.0
Lj5A683T12 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-31 137.1 107 59.8
Lj2C799T2 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-30 136.0 112 57.1
Lj1P1231T36 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-30 135.2 124 53.2
Lju41C56T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-30 135.2 108 58.3
Lj1C9G10 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-30 134.4 103 60.2
Lj9A506T41 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-30 134.0 108 57.4
Lj9C281T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-29 133.7 108 57.4
Lju279A7T18 Lonicera japonica HOM05D000176 ORTHO05D000106 3.2e-29 132.1 108 58.3
Lj7A349G73 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-28 129.0 107 57.9
Lj5A265T32 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-28 128.6 111 49.5
Lj4P278T38 Lonicera japonica HOM05D000176 ORTHO05D000106 6.0e-28 127.9 111 50.5
Lj7C245G13 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-27 127.1 111 51.4
Lj9A412T42 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-27 127.1 111 51.4
Lj4C678T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-27 126.7 122 48.4
Lj7C742T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-27 126.7 111 55.0
Lj1C595G6 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-27 126.3 111 55.0
Lj2C1012T4 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-27 125.9 111 50.5
Lj3A160G33 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-27 125.9 104 58.7
Lju124C17G5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.3e-27 125.9 115 53.0
Lj1A1194T87 Lonicera japonica HOM05D000176 ORTHO05D000106 3.0e-27 125.6 124 46.8
Lj1P174T10 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-27 125.2 125 46.4
Lj3A75T5 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-27 125.2 124 47.6
Lj7C702T2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.9e-26 122.9 124 46.0
Lj8C128T7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-26 122.5 111 48.6
Lj4A278T50 Lonicera japonica HOM05D000176 ORTHO05D000106 3.3e-26 122.1 111 47.7
Lj5C312G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-26 121.7 124 45.2
Lj5C702T0 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-26 121.7 124 45.2
Lju1295A4T34 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-26 121.7 124 45.2
Lj2A512T36 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-26 121.3 124 46.0
Lj5A149T46 Lonicera japonica HOM05D000176 ORTHO05D000106 5.6e-26 121.3 124 44.4
Lj2C1107G22 Lonicera japonica HOM05D000176 ORTHO05D000106 9.6e-26 120.6 124 45.2
Lj6C734T17 Lonicera japonica HOM05D000176 ORTHO05D000106 2.1e-25 119.4 111 52.3
Lj4C456T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-25 119.0 111 47.7
Lj7C461T7 Lonicera japonica HOM05D000176 ORTHO05D000106 3.6e-25 118.6 124 44.4
Lj7C277T0 Lonicera japonica HOM05D000176 ORTHO05D000106 4.8e-25 118.2 115 46.1
Lj1A54G39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-24 116.7 103 53.4
Lju1163C0T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-24 115.9 111 45.9
Lj8C214G5 Lonicera japonica HOM05D001508 ORTHO05D001381 9.0e-24 114.0 98 57.1
Lj7C228G3 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-23 110.9 111 45.9
Lj6A472T10 Lonicera japonica HOM05D000176 ORTHO05D000106 9.9e-23 110.5 111 45.9
Lj7A410T9 Lonicera japonica HOM05D000176 ORTHO05D000106 6.4e-22 107.8 111 45.9
Lj4P388T15 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-21 105.9 99 47.5
Lj9C449G12 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-20 102.4 111 40.5
Lj2A845T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.0e-19 100.5 106 44.3
Lj1A171T30 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-18 95.9 98 46.9
Lju1034C2T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.5e-18 95.9 104 44.2
Lj1A172T27 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-17 92.4 98 44.9
Lj2C708T1 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-17 92.4 88 47.7
Lj8C418G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-16 88.6 91 41.8
Lj2C20T16 Lonicera japonica HOM05D000176 ORTHO05D000106 2.0e-15 86.3 97 48.5
Lj1C479G4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.5e-15 85.1 131 38.9
Lj8C619G11 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-15 84.3 128 39.1
Lj3C54G11 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-14 83.6 81 44.4
Lj8C419G2 Lonicera japonica HOM05D004041 ORTHO05D004564 1.3e-14 83.6 128 38.3
Lj5C479G2 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-14 83.2 128 39.1
Lj2C1004G7 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-14 82.4 128 39.1
Lj1C99T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.8e-14 82.0 128 38.3
Lj2C486T4 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-14 81.6 90 38.9
Lj2C590G2 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-14 80.9 127 38.6
Lj4A157T27 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-14 80.9 73 50.7
Lju158C6T6 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-14 80.9 111 40.5
Lj9C207T4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-13 80.5 128 35.2
Lj1C592T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-13 79.3 99 37.4
Lj9C3T3 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-13 78.6 128 38.3
Lju170C10G7 Lonicera japonica HOM05D000176 ORTHO05D000106 4.2e-13 78.6 109 40.4
Lj7A594T54 Lonicera japonica HOM05D000176 ORTHO05D000106 2.7e-12 75.9 81 43.2
Lj2A942G28 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-12 75.5 78 39.7
Lj4P909T53 Lonicera japonica HOM05D000176 ORTHO05D000106 3.5e-12 75.5 108 32.4
Lj6A519G4 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-11 73.6 74 41.9
Lj5A195T79 Lonicera japonica HOM05D000176 ORTHO05D000106 1.8e-11 73.2 96 40.6
Lj4C692T4 Lonicera japonica HOM05D000176 ORTHO05D000106 3.9e-11 72.0 112 37.5
Lj8C735T3 Lonicera japonica HOM05D000176 ORTHO05D000106 6.7e-11 71.2 127 34.6
Lj6C556T1 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-10 70.1 113 34.5
Lj4C435T5 Lonicera japonica HOM05D000176 ORTHO05D000106 4.3e-10 68.6 66 40.9
Lj1C8G11 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-10 67.8 63 47.6
Lj4C246G13 Lonicera japonica HOM05D000176 ORTHO05D000106 7.4e-10 67.8 62 43.5
Lj4C121T9 Lonicera japonica HOM05D000176 ORTHO05D000106 1.6e-09 66.6 66 43.9
Lj1A491T22 Lonicera japonica HOM05D000176 ORTHO05D000106 6.2e-09 64.7 60 48.3
Lj6C562T7 Lonicera japonica HOM05D000176 ORTHO05D000106 8.2e-09 64.3 86 36.0
Lj2P1002T15 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 63.9 70 40.0
Lj7A368T39 Lonicera japonica HOM05D000176 ORTHO05D000106 1.1e-08 63.9 86 43.0
Lj9P676T51 Lonicera japonica HOM05D000176 ORTHO05D000106 1.4e-08 63.5 51 54.9
Lj2A197T66 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 62.8 60 46.7
Lj2P387T42 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 62.8 60 50.0
Lj9A187T10 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 62.8 60 46.7
Lj9P643T18 Lonicera japonica HOM05D000176 ORTHO05D000106 2.4e-08 62.8 60 46.7
Lj2P503T10 Lonicera japonica HOM05D000176 ORTHO05D000106 4.0e-08 62.0 51 54.9
Lj9P614T42 Lonicera japonica HOM05D000176 ORTHO05D000106 5.3e-08 61.6 60 45.0
Lj2C845T4 Lonicera japonica HOM05D000176 ORTHO05D000106 6.9e-08 61.2 60 48.3
Lj8C33G11 Lonicera japonica HOM05D000176 ORTHO05D000106 9.0e-08 60.8 47 53.2
Lj6P257T7 Lonicera japonica HOM05D000176 ORTHO05D000106 1.5e-07 60.1 46 52.2
RcHm_v2.0_Chr5g0043391 Rosa chinensis HOM05D000176 ORTHO05D000106 2.6e-07 59.3 111 32.4
FvH4_6g36961 Fragaria vesca HOM05D000176 ORTHO05D000106 3.4e-07 58.9 111 35.1
PSO675G7692 Papaver somniferum HOM05D000176 ORTHO05D000106 3.4e-07 58.9 111 31.5
Lj8C518G1 Lonicera japonica HOM05D000176 ORTHO05D000106 7.6e-07 57.8 55 47.3
vmacro16050 Vaccinium macrocarpon HOM05D000176 ORTHO05D000106 1.0e-06 57.4 113 31.9
Lj4A312T8 Lonicera japonica HOM05D000176 ORTHO05D000106 1.3e-06 57.0 52 48.1
Lj6C620T3 Lonicera japonica HOM05D000176 ORTHO05D000106 1.7e-06 56.6 60 43.3
Lj2A419T34 Lonicera japonica HOM05D000176 ORTHO05D000106 2.2e-06 56.2 47 51.1
Lju2000C0T5 Lonicera japonica HOM05D000176 ORTHO05D000106 2.9e-06 55.8 124 29.8
Lj3A82T21 Lonicera japonica HOM05D000176 ORTHO05D234538 4.9e-06 55.1 51 51.0
Lj4C241T6 Lonicera japonica HOM05D000176 ORTHO05D000106 4.9e-06 55.1 58 46.6
PSO017G5879 Papaver somniferum HOM05D000176 ORTHO05D000106 4.9e-06 55.1 111 29.7
CSS0039650 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 6.5e-06 54.7 112 30.4
MD17G1028300 Malus domestica HOM05D000176 ORTHO05D000106 6.5e-06 54.7 114 29.8
Aqoxy2G02523 Aquilegia oxysepala HOM05D000176 ORTHO05D000106 8.4e-06 54.3 107 26.2
Lj1C694T2 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-06 54.3 46 56.5
Lj7A25T29 Lonicera japonica HOM05D000176 ORTHO05D000106 8.4e-06 54.3 61 42.6
RcHm_v2.0_Chr1g0332031 Rosa chinensis HOM05D000176 ORTHO05D000106 8.4e-06 54.3 114 32.5


User provided reference genes

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