Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P362T0 Lonicera japonica HOM05D001497 ORTHO05D234327 2.1e-54 215.3 101 100.0
Lj1A129T63 Lonicera japonica HOM05D001497 ORTHO05D001707 2.7e-41 171.8 101 82.2
Atru.chr3.4146 Acer truncatum HOM05D001497 ORTHO05D001707 7.4e-15 84.0 101 47.5
TAR369G0346 Trochodendron aralioides HOM05D001497 ORTHO05D001707 2.2e-14 82.4 103 49.5
Actinidia29084 Actinidia chinensis HOM05D001497 ORTHO05D001707 6.3e-14 80.9 102 48.0
Cc01_g14610 Coffea canephora HOM05D001497 ORTHO05D001707 1.8e-13 79.3 101 45.5
Atru.chr8.2297 Acer truncatum HOM05D001497 ORTHO05D001707 2.4e-13 79.0 102 51.0
COL.COLO4_14487 Corchorus olitorius HOM05D001497 ORTHO05D001707 4.1e-13 78.2 102 47.1
Duzib168G0845 Durio zibethinus HOM05D001497 ORTHO05D001707 5.3e-13 77.8 101 47.5
Cpa.g.sc120.34 Carica papaya HOM05D001497 ORTHO05D001707 7.0e-13 77.4 102 48.0
COL.COLO4_11070 Corchorus olitorius HOM05D001497 ORTHO05D001707 1.2e-12 76.6 101 45.5
TAR623G1492 Trochodendron aralioides HOM05D001497 ORTHO05D001707 1.2e-12 76.6 102 49.0
Ciclev10010996m.g Citrus clementina HOM05D001497 ORTHO05D001707 2.0e-12 75.9 102 46.1
Duzib128G1352 Durio zibethinus HOM05D001497 ORTHO05D001707 2.0e-12 75.9 102 45.1
Duzib150G1546 Durio zibethinus HOM05D001497 ORTHO05D001707 2.0e-12 75.9 101 43.6
CiPaw.10G159400 Carya illinoinensis HOM05D001497 ORTHO05D001707 2.6e-12 75.5 104 46.2
Ciclev10030370m.g Citrus clementina HOM05D001497 ORTHO05D001707 3.5e-12 75.1 101 46.5
Duzib106G0077 Durio zibethinus HOM05D001497 ORTHO05D001707 3.5e-12 75.1 101 44.6
Haze_21050 Corylus avellana HOM05D001497 ORTHO05D001707 4.5e-12 74.7 102 47.1
Dinv08444 Davidia involucrata HOM05D001497 ORTHO05D001707 4.5e-12 74.7 102 44.1
Gohir.D08G219300 Gossypium hirsutum HOM05D001497 ORTHO05D001707 4.5e-12 74.7 101 45.5
Nitab4.5_0000719g0080 Nicotiana tabacum HOM05D001497 ORTHO05D001707 4.5e-12 74.7 101 40.6
Sabra09G0057200 Salix brachista HOM05D001497 ORTHO05D001707 4.5e-12 74.7 102 45.1
Cfa017150 Carpinus fangiana HOM05D001497 ORTHO05D001707 5.9e-12 74.3 102 47.1
Nitab4.5_0009960g0010 Nicotiana tabacum HOM05D001497 ORTHO05D001707 5.9e-12 74.3 101 40.6
Manes.09G109400 Manihot esculenta HOM05D001497 ORTHO05D001707 7.7e-12 73.9 102 49.0
Gorai.004G233400 Gossypium raimondii HOM05D001497 ORTHO05D001707 1.0e-11 73.6 101 44.6
Lalb_Chr13g0291411 Lupinus albus HOM05D001497 ORTHO05D001707 1.0e-11 73.6 101 44.6
Cpa.g.sc2.393 Carica papaya HOM05D001497 ORTHO05D001707 1.3e-11 73.2 101 43.6
Eucgr.A00599 Eucalyptus grandis HOM05D001497 ORTHO05D001707 1.3e-11 73.2 104 44.2
FvH4_3g39300 Fragaria vesca HOM05D001497 ORTHO05D001707 1.7e-11 72.8 101 42.6
FAN11G2952 Fragaria x ananassa HOM05D001497 ORTHO05D001707 1.7e-11 72.8 101 42.6
THA.LOC104806614 Tarenaya hassleriana HOM05D001497 ORTHO05D001707 2.2e-11 72.4 101 47.5
CiPaw.13G073100 Carya illinoinensis HOM05D001497 ORTHO05D001707 2.9e-11 72.0 101 42.6
Potri.001G280100 Populus trichocarpa HOM05D001497 ORTHO05D001707 2.9e-11 72.0 100 44.0
PSO017G6358 Papaver somniferum HOM05D001497 ORTHO05D001707 3.8e-11 71.6 101 45.5
PSO349G0286 Papaver somniferum HOM05D001497 ORTHO05D001707 3.8e-11 71.6 101 45.5
Potri.009G075300 Populus trichocarpa HOM05D001497 ORTHO05D001707 3.8e-11 71.6 102 46.1
Rhsim05G0222200 Rhododendron simsii HOM05D001497 ORTHO05D001707 3.8e-11 71.6 102 44.1
THA.LOC104823373 Tarenaya hassleriana HOM05D001497 ORTHO05D001707 3.8e-11 71.6 101 46.5
BolC8t50317H Brassica oleracea HOM05D001497 ORTHO05D001707 5.0e-11 71.2 101 46.5
Hma1.2p1_0501F.1_g167610 Hydrangea macrophylla HOM05D001497 ORTHO05D001707 5.0e-11 71.2 104 44.2
CAN.G99.13 Capsicum annuum HOM05D001497 ORTHO05D001707 6.5e-11 70.9 101 41.6
QL07p034265 Quercus lobata HOM05D001497 ORTHO05D001707 6.5e-11 70.9 104 42.3
ATR0565G002 Amborella trichopoda HOM05D001497 ORTHO05D001707 8.5e-11 70.5 101 39.6
BraA03t11353Z Brassica rapa HOM05D001497 ORTHO05D001707 8.5e-11 70.5 101 45.5
Lalb_Chr07g0191221 Lupinus albus HOM05D001497 ORTHO05D001707 8.5e-11 70.5 111 41.4
RcHm_v2.0_Chr5g0070731 Rosa chinensis HOM05D001497 ORTHO05D001707 8.5e-11 70.5 101 39.6
A03p21120 Brassica napus HOM05D001497 ORTHO05D001707 1.1e-10 70.1 101 45.5
C07p46590 Brassica napus HOM05D001497 ORTHO05D001707 1.1e-10 70.1 100 46.0
MD04G1162900 Malus domestica HOM05D001497 ORTHO05D001707 1.1e-10 70.1 103 44.7
PSO339G3385 Papaver somniferum HOM05D001497 ORTHO05D001707 1.1e-10 70.1 103 42.7
Thecc.09G353900 Theobroma cacao HOM05D001497 ORTHO05D001707 1.1e-10 70.1 101 41.6
BcaB01g00480 Brassica carinata HOM05D001497 ORTHO05D001707 1.5e-10 69.7 101 45.5
C08p27000 Brassica napus HOM05D001497 ORTHO05D001707 1.5e-10 69.7 101 45.5
CARHR161400 Cardamine hirsuta HOM05D001497 ORTHO05D001707 1.5e-10 69.7 101 44.6
PGR031G0909 Punica granatum HOM05D001497 ORTHO05D001707 1.5e-10 69.7 102 43.1
DCAR_018214 Daucus carota HOM05D001497 ORTHO05D001707 1.9e-10 69.3 101 42.6
Sabra16G0173800 Salix brachista HOM05D001497 ORTHO05D001707 1.9e-10 69.3 100 42.0
vmacro20310 Vaccinium macrocarpon HOM05D001497 ORTHO05D001707 1.9e-10 69.3 102 42.2
BcaC06g33349 Brassica carinata HOM05D001497 ORTHO05D001707 2.5e-10 68.9 100 46.0
BolC7t45174H Brassica oleracea HOM05D001497 ORTHO05D001707 2.5e-10 68.9 100 45.0
Carub.0005s1812 Capsella rubella HOM05D001497 ORTHO05D001707 2.5e-10 68.9 101 45.5
Migut.L02037 Erythranthe guttata HOM05D001497 ORTHO05D001707 2.5e-10 68.9 107 42.1
Thhalv10016193m.g Eutrema salsugineum HOM05D001497 ORTHO05D001707 2.5e-10 68.9 103 46.6
Sp4g20600 Schrenkiella parvula HOM05D001497 ORTHO05D001707 2.5e-10 68.9 101 44.6
TWI74G1179 Tripterygium wilfordii HOM05D001497 ORTHO05D001707 2.5e-10 68.9 103 44.7
Thecc.05G009800 Theobroma cacao HOM05D001497 ORTHO05D001707 3.2e-10 68.6 102 42.2
Gohir.D01G218800 Gossypium hirsutum HOM05D001497 ORTHO05D001707 4.2e-10 68.2 102 42.2
Gorai.002G265500 Gossypium raimondii HOM05D001497 ORTHO05D001707 4.2e-10 68.2 102 42.2
Lj3g0005354 Lotus japonicus HOM05D001497 ORTHO05D001707 4.2e-10 68.2 107 42.1
QL01p039612 Quercus lobata HOM05D001497 ORTHO05D001707 4.2e-10 68.2 103 39.8
FAN21G1307 Fragaria x ananassa HOM05D001497 ORTHO05D001707 7.2e-10 67.4 101 42.6
Gohir.A01G228900 Gossypium hirsutum HOM05D001497 ORTHO05D001707 7.2e-10 67.4 102 42.2
Solyc09g055310.3 Solanum lycopersicum HOM05D001497 ORTHO05D001707 7.2e-10 67.4 101 40.6
Sopen09g017520 Solanum pennellii HOM05D001497 ORTHO05D001707 7.2e-10 67.4 101 40.6
AL5G32230 Arabidopsis lyrata HOM05D001497 ORTHO05D001707 9.4e-10 67.0 101 45.5
BolC3t14892H Brassica oleracea HOM05D001497 ORTHO05D001707 9.4e-10 67.0 101 44.6
CANSAT35G1585 Cannabis sativa HOM05D001497 ORTHO05D001707 9.4e-10 67.0 104 41.3
AT3G51770 Arabidopsis thaliana HOM05D001497 ORTHO05D001707 1.2e-09 66.6 101 45.5
BcaC01g05552 Brassica carinata HOM05D001497 ORTHO05D001707 1.2e-09 66.6 101 44.6
C03p25010 Brassica napus HOM05D001497 ORTHO05D001707 1.2e-09 66.6 101 44.6
FAN16G2110 Fragaria x ananassa HOM05D001497 ORTHO05D001707 1.2e-09 66.6 101 40.6
FAN25G2571 Fragaria x ananassa HOM05D001497 ORTHO05D001707 1.2e-09 66.6 101 40.6
MBI15_g21766_MAGBIO Magnolia biondii HOM05D001497 ORTHO05D001707 1.2e-09 66.6 102 41.2
Aa31LG5G23230 Aethionema arabicum HOM05D001497 ORTHO05D001707 1.6e-09 66.2 101 46.5
A09p44940 Brassica napus HOM05D001497 ORTHO05D001707 1.6e-09 66.2 101 43.6
BraA09t39953Z Brassica rapa HOM05D001497 ORTHO05D001707 1.6e-09 66.2 101 43.6
MD03G1062500 Malus domestica HOM05D001497 ORTHO05D001707 1.6e-09 66.2 101 40.6
Potri.006G103400 Populus trichocarpa HOM05D001497 ORTHO05D001707 2.1e-09 65.9 108 40.7
Aa31LG5G23260 Aethionema arabicum HOM05D001497 ORTHO05D001707 2.7e-09 65.5 101 46.5
Ah.12g058920 Amaranthus hybridus HOM05D001497 ORTHO05D001707 2.7e-09 65.5 112 39.3
MD12G1176500 Malus domestica HOM05D001497 ORTHO05D001707 2.7e-09 65.5 103 40.8
TWI31G1465 Tripterygium wilfordii HOM05D001497 ORTHO05D001707 2.7e-09 65.5 102 42.2
Dinv12137 Davidia involucrata HOM05D001497 ORTHO05D001707 3.6e-09 65.1 102 40.2
MSTRG.10203 Avicennia marina HOM05D001497 ORTHO05D001707 4.7e-09 64.7 108 38.9
Thhalv10010100m.g Eutrema salsugineum HOM05D001497 ORTHO05D001707 4.7e-09 64.7 101 42.6
Aa31sc772G10 Aethionema arabicum HOM05D001497 ORTHO05D001707 6.1e-09 64.3 101 44.6
Thhalv10012604m.g Eutrema salsugineum HOM05D001497 ORTHO05D001707 6.1e-09 64.3 104 40.4
Gohir.D13G239300 Gossypium hirsutum HOM05D001497 ORTHO05D001707 6.1e-09 64.3 102 42.2
Sp5g10500 Schrenkiella parvula HOM05D001497 ORTHO05D001707 6.1e-09 64.3 101 42.6
BcaC06g33006 Brassica carinata HOM05D001497 ORTHO05D001707 8.0e-09 63.9 101 43.6
MD11G1066100 Malus domestica HOM05D001497 ORTHO05D001707 8.0e-09 63.9 101 40.6
Medtr7g069700 Medicago truncatula HOM05D001497 ORTHO05D001707 8.0e-09 63.9 103 36.9
Aqoxy1G01267 Aquilegia oxysepala HOM05D001497 ORTHO05D001707 1.4e-08 63.2 102 41.2
Ca_07675_v3 Cicer arietinum L. HOM05D001497 ORTHO05D001707 1.4e-08 63.2 109 40.4
C09p50530 Brassica napus HOM05D001497 ORTHO05D001707 1.8e-08 62.8 101 39.6
BolC9t57910H Brassica oleracea HOM05D001497 ORTHO05D001707 1.8e-08 62.8 101 39.6
Actinidia23874 Actinidia chinensis HOM05D001497 ORTHO05D001707 3.0e-08 62.0 99 39.4
BcaB01g00420 Brassica carinata HOM05D001497 ORTHO05D001707 3.0e-08 62.0 103 42.7
CAN.G385.12 Capsicum annuum HOM05D001497 ORTHO05D001707 3.0e-08 62.0 105 39.0
Haze_24382 Corylus avellana HOM05D001497 ORTHO05D001707 3.0e-08 62.0 103 39.8
Lj1g0007398 Lotus japonicus HOM05D001497 ORTHO05D001707 3.0e-08 62.0 109 41.3
Potri.016G123800 Populus trichocarpa HOM05D001497 ORTHO05D001707 3.0e-08 62.0 111 39.6
Actinidia34468 Actinidia chinensis HOM05D001497 ORTHO05D001707 4.0e-08 61.6 99 40.4
Carub.0008s1915 Capsella rubella HOM05D001497 ORTHO05D001707 4.0e-08 61.6 103 35.9
Ca_20331_v3 Cicer arietinum L. HOM05D001497 ORTHO05D001707 4.0e-08 61.6 112 40.2
SEGI_20699 Sequoiadendron giganteum HOM05D001497 ORTHO05D001707 4.0e-08 61.6 101 38.6
SEGI_30141 Sequoiadendron giganteum HOM05D001497 ORTHO05D001707 4.0e-08 61.6 101 38.6
arahy.Tifrunner.gnm1.ann1.LYC348 Arachis hypogaea HOM05D001497 ORTHO05D001707 5.2e-08 61.2 111 41.4
arahy.Tifrunner.gnm1.ann1.QRLI3G Arachis hypogaea HOM05D001497 ORTHO05D001707 5.2e-08 61.2 111 41.4
Glyma.18G059700 Glycine max HOM05D001497 ORTHO05D001707 5.2e-08 61.2 101 36.6
Peaxi162Scf01625g00006 Petunia axillaris HOM05D001497 ORTHO05D001707 5.2e-08 61.2 101 36.6
VMungo1383G1899 Vigna mungo HOM05D001497 ORTHO05D001707 5.2e-08 61.2 112 38.4
A03p48500 Brassica napus HOM05D001497 ORTHO05D001707 6.7e-08 60.8 101 41.6
BraA03t13955Z Brassica rapa HOM05D001497 ORTHO05D001707 6.7e-08 60.8 101 41.6
Phvul.008G094700 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 6.7e-08 60.8 112 37.5
RcHm_v2.0_Chr3g0462291 Rosa chinensis HOM05D001497 ORTHO05D001707 6.7e-08 60.8 101 37.6
EL10Ac5g12517 Beta vulgaris HOM05D001497 ORTHO05D001707 8.8e-08 60.5 115 36.5
Lalb_Chr01g0023251 Lupinus albus HOM05D001497 ORTHO05D001707 8.8e-08 60.5 122 36.1
Peaxi162Scf01132g00334 Petunia axillaris HOM05D001497 ORTHO05D001707 8.8e-08 60.5 105 37.1
Aa31LG11G310 Aethionema arabicum HOM05D001497 ORTHO05D001707 1.1e-07 60.1 101 36.6
Lalb_Chr10g0103511 Lupinus albus HOM05D001497 ORTHO05D001707 1.1e-07 60.1 103 39.8
Medtr4g014680 Medicago truncatula HOM05D001497 ORTHO05D001707 1.1e-07 60.1 104 40.4
Nn2g10950 Nelumbo nucifera HOM05D001497 ORTHO05D001707 1.1e-07 60.1 102 41.2
Prupe.6G052500 Prunus persica HOM05D001497 ORTHO05D001707 1.1e-07 60.1 104 38.5
BcaC02g11971 Brassica carinata HOM05D001497 ORTHO05D001707 1.5e-07 59.7 101 41.6
Glyma.11G167200 Glycine max HOM05D001497 ORTHO05D001707 1.5e-07 59.7 101 38.6
Sabra16G0118600 Salix brachista HOM05D001497 ORTHO05D001707 1.5e-07 59.7 115 38.3
A10p15720 Brassica napus HOM05D001497 ORTHO05D001707 2.0e-07 59.3 101 38.6
BraA10t43659Z Brassica rapa HOM05D001497 ORTHO05D001707 2.0e-07 59.3 101 38.6
FvH4_6g10980 Fragaria vesca HOM05D001497 ORTHO05D001707 2.0e-07 59.3 105 38.1
Psat3g124200 Pisum sativum HOM05D001497 ORTHO05D001707 2.0e-07 59.3 108 38.0
SalBow4G0616 Salvia bowleyana HOM05D001497 ORTHO05D001707 2.6e-07 58.9 109 38.5
C04p09420 Brassica napus HOM05D001497 ORTHO05D001707 3.3e-07 58.5 101 42.6
Sc22g0002610 Simmondsia chinensis HOM05D001497 ORTHO05D001707 3.3e-07 58.5 123 34.1
VMungo0540G1398 Vigna mungo HOM05D001497 ORTHO05D001707 4.4e-07 58.2 101 36.6
Hund10950 Selenicereus undatus HOM05D001497 ORTHO05D001707 5.7e-07 57.8 112 36.6
arahy.Tifrunner.gnm1.ann1.EMJH24 Arachis hypogaea HOM05D001497 ORTHO05D001707 7.5e-07 57.4 101 34.7
arahy.Tifrunner.gnm1.ann1.PP8NAY Arachis hypogaea HOM05D001497 ORTHO05D001707 7.5e-07 57.4 101 34.7
BcaB01g03711 Brassica carinata HOM05D001497 ORTHO05D001707 7.5e-07 57.4 95 43.2
BolC4t22546H Brassica oleracea HOM05D001497 ORTHO05D001707 7.5e-07 57.4 101 42.6
Cc06_g00980 Coffea canephora HOM05D001497 ORTHO05D001707 7.5e-07 57.4 108 38.9
Cfa011742 Carpinus fangiana HOM05D001497 ORTHO05D001707 9.7e-07 57.0 103 37.9
CDE06G0587 Ceratophyllum demersum HOM05D001497 ORTHO05D001707 9.7e-07 57.0 101 35.6
Ca_14983_v3 Cicer arietinum L. HOM05D001497 ORTHO05D001707 9.7e-07 57.0 102 36.3
Lj3A948T60 Lonicera japonica HOM05D001497 ORTHO05D001707 9.7e-07 57.0 102 39.2
Phvul.010G078500 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 9.7e-07 57.0 108 35.2
Lsat_1_v5_gn_5_173280 Lactuca sativa HOM05D001497 ORTHO05D001707 1.3e-06 56.6 107 37.4
Psat7g247400 Pisum sativum HOM05D001497 ORTHO05D001707 1.3e-06 56.6 113 37.2
Prupe.6G282400 Prunus persica HOM05D001497 ORTHO05D001707 1.3e-06 56.6 120 36.7
Hund14913 Selenicereus undatus HOM05D001497 ORTHO05D001707 1.7e-06 56.2 109 36.7
Solyc10g076450.2 Solanum lycopersicum HOM05D001497 ORTHO05D001707 1.7e-06 56.2 106 34.9
Sopen10g028110 Solanum pennellii HOM05D001497 ORTHO05D001707 1.7e-06 56.2 106 34.9
AUR62030506 Chenopodium quinoa HOM05D001497 ORTHO05D001707 2.2e-06 55.8 121 34.7
AUR62030787 Chenopodium quinoa HOM05D001497 ORTHO05D001707 2.2e-06 55.8 101 34.7
PGSC0003DMG400026638 Solanum tuberosum HOM05D001497 ORTHO05D001707 2.2e-06 55.8 108 38.0
BcaB08g36190 Brassica carinata HOM05D001497 ORTHO05D001707 2.8e-06 55.5 101 37.6
PGSC0003DMG400015898 Solanum tuberosum HOM05D001497 ORTHO05D001707 2.8e-06 55.5 106 34.0
arahy.Tifrunner.gnm1.ann1.KIEQ4J Arachis hypogaea HOM05D001497 ORTHO05D001707 4.8e-06 54.7 104 35.6
FAN09G0418 Fragaria x ananassa HOM05D001497 ORTHO05D001707 4.8e-06 54.7 105 36.2
CDE12G0183 Ceratophyllum demersum HOM05D001497 ORTHO05D001619 6.3e-06 54.3 101 34.7
Phvul.008G258800 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 6.3e-06 54.3 104 36.5
arahy.Tifrunner.gnm1.ann1.649KNP Arachis hypogaea HOM05D001497 ORTHO05D001707 8.2e-06 53.9 104 35.6
CSS0007624 Camellia sinensis var. sinensis HOM05D001497 ORTHO05D001707 8.2e-06 53.9 57 52.6
Glyma.03G051300 Glycine max HOM05D001497 ORTHO05D001707 8.2e-06 53.9 110 33.6
Phvul.006G071500 Phaseolus vulgaris HOM05D001497 ORTHO05D001707 8.2e-06 53.9 101 36.6


User provided reference genes

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