Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P348T4 Lonicera japonica HOM05D000034 ORTHO05D000037 3.2e-56 221.5 107 100.0
Lj8P314T20 Lonicera japonica HOM05D000034 ORTHO05D000037 4.3e-45 184.5 101 86.1
Lj2P831T16 Lonicera japonica HOM05D000034 ORTHO05D000037 5.2e-35 151.0 101 72.3
Lj5C459G5 Lonicera japonica HOM05D000034 ORTHO05D000037 3.2e-32 141.7 101 71.3
Lj6P127T16 Lonicera japonica HOM05D000034 ORTHO05D000037 1.9e-29 132.5 68 89.7
Lju897P0T11 Lonicera japonica HOM05D000034 ORTHO05D000037 1.9e-29 132.5 66 92.4
Lju897P2T8 Lonicera japonica HOM05D000034 ORTHO05D000037 8.1e-28 127.1 68 85.3
Lj2P58T40 Lonicera japonica HOM05D000034 ORTHO05D000037 2.2e-17 92.4 60 73.3
Dinv18425 Davidia involucrata HOM05D000034 ORTHO05D000037 5.3e-11 71.2 114 37.7
MBI01_g38804_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.4e-10 68.6 100 40.0
Dinv24584 Davidia involucrata HOM05D000034 ORTHO05D000037 4.5e-10 68.2 108 38.0
MBI10_g16027_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 4.5e-10 68.2 104 38.5
Prupe.5G234400 Prunus persica HOM05D000034 ORTHO05D000037 7.6e-10 67.4 108 37.0
Rhsim02G0051100 Rhododendron simsii HOM05D000034 ORTHO05D000037 7.6e-10 67.4 110 37.3
TWI60G0826 Tripterygium wilfordii HOM05D000034 ORTHO05D000037 7.6e-10 67.4 108 38.9
PSO210G6832 Papaver somniferum HOM05D000034 ORTHO05D000037 1.0e-09 67.0 101 40.6
Actinidia39425 Actinidia chinensis HOM05D000034 ORTHO05D000037 1.7e-09 66.2 110 36.4
CSS0024479 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-09 66.2 114 36.8
CSS0025116 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.7e-09 66.2 114 36.8
Lalb_Chr22g0353531 Lupinus albus HOM05D000034 ORTHO05D000037 1.7e-09 66.2 113 35.4
PSO384G2301 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 66.2 101 39.6
PSO675G0372 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 66.2 101 39.6
PSO782G5444 Papaver somniferum HOM05D000034 ORTHO05D000037 1.7e-09 66.2 101 40.6
MBI18_g28195_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.2e-09 65.9 60 56.7
PSO782G0240 Papaver somniferum HOM05D000034 ORTHO05D000037 2.2e-09 65.9 101 39.6
PSO017G6925 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-09 65.5 101 39.6
PSO063G0285 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-09 65.5 101 39.6
PSO541G3789 Papaver somniferum HOM05D000034 ORTHO05D000037 2.9e-09 65.5 101 39.6
Cc07_g19730 Coffea canephora HOM05D000034 ORTHO05D000037 3.8e-09 65.1 100 39.0
DCAR_028638 Daucus carota HOM05D001678 ORTHO05D001698 3.8e-09 65.1 99 35.4
PSO017G1363 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 98 39.8
PSO063G3806 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO675G0186 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO675G3384 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO675G6548 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO732G0275 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO782G1808 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
PSO782G5727 Papaver somniferum HOM05D000034 ORTHO05D000037 3.8e-09 65.1 101 39.6
Sopen05g034720 Solanum pennellii HOM05D000034 ORTHO05D000037 3.8e-09 65.1 99 35.4
Nitab4.5_0006957g0010 Nicotiana tabacum HOM05D000034 ORTHO05D000037 4.9e-09 64.7 101 37.6
PSO339G5100 Papaver somniferum HOM05D000034 ORTHO05D000037 6.5e-09 64.3 101 39.6
PSO339G5127 Papaver somniferum HOM05D000034 ORTHO05D000037 6.5e-09 64.3 100 38.0
PSO541G2774 Papaver somniferum HOM05D000034 ORTHO05D000037 6.5e-09 64.3 101 38.6
PSO210G1286 Papaver somniferum HOM05D000034 ORTHO05D000037 8.4e-09 63.9 101 39.6
QL08p011917 Quercus lobata HOM05D000034 ORTHO05D000037 8.4e-09 63.9 102 41.2
TAR331G0001 Trochodendron aralioides HOM05D000034 ORTHO05D000037 8.4e-09 63.9 98 38.8
Atru.chr8.561 Acer truncatum HOM05D000034 ORTHO05D000037 1.1e-08 63.5 98 37.8
PSO063G2661 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-08 63.5 100 36.0
PSO223G0036 Papaver somniferum HOM05D000034 ORTHO05D000037 1.1e-08 63.5 100 35.0
Sabra15G0031700 Salix brachista HOM05D000034 ORTHO05D000037 1.4e-08 63.2 109 37.6
CSS0044788 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.9e-08 62.8 99 37.4
Nitab4.5_0000496g0280 Nicotiana tabacum HOM05D000034 ORTHO05D000037 1.9e-08 62.8 99 36.4
Sp7g00150 Schrenkiella parvula HOM05D000034 ORTHO05D000037 1.9e-08 62.8 110 36.4
Lju470C3T13 Lonicera japonica HOM05D000034 ORTHO05D000037 2.5e-08 62.4 100 40.0
PSO170G4005 Papaver somniferum HOM05D000034 ORTHO05D000037 2.5e-08 62.4 101 38.6
CANSAT80G2048 Cannabis sativa HOM05D000034 ORTHO05D000037 3.2e-08 62.0 114 37.7
FvH4_4g05911 Fragaria vesca HOM05D000034 ORTHO05D000037 3.2e-08 62.0 109 33.0
Lj4C317T2 Lonicera japonica HOM05D000034 ORTHO05D001698 3.2e-08 62.0 99 37.4
BcaB06g27685 Brassica carinata HOM05D000034 ORTHO05D000037 4.2e-08 61.6 112 35.7
Lj2P433T6 Lonicera japonica HOM05D000034 ORTHO05D000037 4.2e-08 61.6 99 37.4
PSO541G0261 Papaver somniferum HOM05D000034 ORTHO05D000037 4.2e-08 61.6 100 33.0
Duzib205G0579 Durio zibethinus HOM05D000034 ORTHO05D000037 5.5e-08 61.2 109 37.6
Atru.chr9.1673 Acer truncatum HOM05D000034 ORTHO05D000037 7.1e-08 60.8 109 37.6
Sed0017400 Sechium edule HOM05D000034 ORTHO05D000037 7.1e-08 60.8 109 34.9
EL10Ac5g12134 Beta vulgaris HOM05D000034 ORTHO05D000037 9.3e-08 60.5 100 33.0
EL10Ac5g12725 Beta vulgaris HOM05D000034 ORTHO05D000037 9.3e-08 60.5 100 33.0
FvH4_4g17331 Fragaria vesca HOM05D000034 ORTHO05D000037 9.3e-08 60.5 100 39.0
MD14G1237100 Malus domestica HOM05D000034 ORTHO05D000037 1.2e-07 60.1 110 33.6
PSO782G4903 Papaver somniferum HOM05D000034 ORTHO05D000037 1.2e-07 60.1 100 35.0
Atru.chr9.764 Acer truncatum HOM05D000034 ORTHO05D000037 1.6e-07 59.7 99 34.3
MSTRG.3282 Avicennia marina HOM05D000034 ORTHO05D001902 1.6e-07 59.7 99 35.4
A04p15120 Brassica napus HOM05D000034 ORTHO05D000037 1.6e-07 59.7 108 32.4
BraA04t17153Z Brassica rapa HOM05D000034 ORTHO05D000037 1.6e-07 59.7 108 32.4
CSS0044615 Camellia sinensis var. sinensis HOM05D000034 ORTHO05D000037 1.6e-07 59.7 107 36.4
Cpa.g.sc34.138 Carica papaya HOM05D000034 ORTHO05D000037 1.6e-07 59.7 103 36.9
ClCG04G010580 Citrullus lanatus HOM05D000034 ORTHO05D000037 1.6e-07 59.7 109 34.9
Nn3g18514 Nelumbo nucifera HOM05D000034 ORTHO05D000037 1.6e-07 59.7 113 35.4
AL5G20820 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 2.1e-07 59.3 98 34.7
MELO3C035756.2 Cucumis melo HOM05D000034 ORTHO05D000037 2.1e-07 59.3 110 33.6
MBI05_g32328_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.1e-07 59.3 101 36.6
Oeu004392.1 Olea europaea HOM05D000034 ORTHO05D000037 2.1e-07 59.3 110 35.5
Atru.chr3.1441 Acer truncatum HOM05D000034 ORTHO05D000037 2.7e-07 58.9 103 38.8
AT5G41980 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 2.7e-07 58.9 106 34.0
arahy.Tifrunner.gnm1.ann1.TW33UK Arachis hypogaea HOM05D000034 ORTHO05D000037 2.7e-07 58.9 101 41.6
Nn1g08452 Nelumbo nucifera HOM05D000034 ORTHO05D000037 2.7e-07 58.9 99 34.3
Oeu027419.1 Olea europaea HOM05D000034 ORTHO05D000037 2.7e-07 58.9 101 36.6
Os10g0460733 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 2.7e-07 58.9 103 35.0
AL6G14840 Arabidopsis lyrata HOM05D000034 ORTHO05D000037 3.5e-07 58.5 97 32.0
arahy.Tifrunner.gnm1.ann1.Q9J6SI Arachis hypogaea HOM05D000034 ORTHO05D000037 3.5e-07 58.5 101 41.6
EL10Ac9g20737 Beta vulgaris HOM05D000034 ORTHO05D000037 3.5e-07 58.5 100 32.0
MBI12_g00584_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.5e-07 58.5 104 35.6
Os04g0471100 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 3.5e-07 58.5 103 35.0
PGR119G0632 Punica granatum HOM05D000034 ORTHO05D000037 3.5e-07 58.5 99 33.3
Aa31LG3G18090 Aethionema arabicum HOM05D000034 ORTHO05D000037 4.6e-07 58.2 107 33.6
EL10Ac4g08654 Beta vulgaris HOM05D000034 ORTHO05D000037 4.6e-07 58.2 100 32.0
Ca_25343_v3 Cicer arietinum L. HOM05D000034 ORTHO05D000037 4.6e-07 58.2 111 31.5
HanXRQChr12g0377921 Helianthus annuus HOM05D000034 ORTHO05D000037 4.6e-07 58.2 96 39.6
PSO017G5283 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 58.2 109 38.5
PSO017G6329 Papaver somniferum HOM05D000034 ORTHO05D000037 4.6e-07 58.2 109 38.5
Os05g0252801 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 6.0e-07 57.8 103 34.0
Sabra19G0011500 Salix brachista HOM05D000034 ORTHO05D003147 6.0e-07 57.8 107 33.6
TPR.G11067 Trifolium pratense HOM05D000034 ORTHO05D000037 6.0e-07 57.8 99 31.3
BolC4t26522H Brassica oleracea HOM05D000034 ORTHO05D000037 7.9e-07 57.4 106 34.9
Ca_25252_v3 Cicer arietinum L. HOM05D000034 ORTHO05D000037 7.9e-07 57.4 101 35.6
PGR083G1796 Punica granatum HOM05D000034 ORTHO05D000037 7.9e-07 57.4 110 35.5
arahy.Tifrunner.gnm1.ann1.SX4YV9 Arachis hypogaea HOM05D000034 ORTHO05D000037 1.0e-06 57.0 113 31.9
BcaC02g08898 Brassica carinata HOM05D000034 ORTHO05D000037 1.0e-06 57.0 108 35.2
BcaC02g08899 Brassica carinata HOM05D000034 ORTHO05D000037 1.0e-06 57.0 108 35.2
C04p49350 Brassica napus HOM05D000034 ORTHO05D000037 1.0e-06 57.0 108 35.2
COL.COLO4_04994 Corchorus olitorius HOM05D000034 ORTHO05D000037 1.0e-06 57.0 109 35.8
MD06G1227900 Malus domestica HOM05D000034 ORTHO05D000037 1.0e-06 57.0 106 33.0
Os10g0126100 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 1.0e-06 57.0 103 34.0
QL10p030520 Quercus lobata HOM05D000034 ORTHO05D000037 1.0e-06 57.0 110 33.6
QL10p030552 Quercus lobata HOM05D000034 ORTHO05D000037 1.0e-06 57.0 110 33.6
TPR.G31340 Trifolium pratense HOM05D000034 ORTHO05D000037 1.0e-06 57.0 99 31.3
Atru.chr8.1129 Acer truncatum HOM05D000034 ORTHO05D000037 1.3e-06 56.6 99 33.3
Hma1.2p1_0296F.1_g116800 Hydrangea macrophylla HOM05D000034 ORTHO05D000037 1.3e-06 56.6 99 35.4
MBI04_g23911_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 1.3e-06 56.6 96 37.5
EL10Ac1g01616 Beta vulgaris HOM05D000034 ORTHO05D000037 1.8e-06 56.2 100 31.0
BcaB01g00914 Brassica carinata HOM05D000034 ORTHO05D000037 1.8e-06 56.2 101 32.7
AUR62019442 Chenopodium quinoa HOM05D000034 ORTHO05D000037 1.8e-06 56.2 100 33.0
CsaV3_1G007210 Cucumis sativus L. HOM05D000034 ORTHO05D000037 1.8e-06 56.2 110 32.7
ECA233G0183 Erigeron canadensis HOM05D000034 ORTHO05D000037 1.8e-06 56.2 116 32.8
THA.LOC104802355 Tarenaya hassleriana HOM05D000034 ORTHO05D000037 1.8e-06 56.2 111 33.3
MBI03_g22270_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.3e-06 55.8 105 33.3
MBI11_g34848_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 2.3e-06 55.8 54 53.7
RcHm_v2.0_Chr6g0248041 Rosa chinensis HOM05D000034 ORTHO05D000037 2.3e-06 55.8 102 34.3
VMungo0464G0508 Vigna mungo HOM05D000034 ORTHO05D000037 2.3e-06 55.8 111 32.4
AT5G35695 Arabidopsis thaliana HOM05D000034 ORTHO05D000037 3.0e-06 55.5 105 34.3
MBI02_g22103_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 3.0e-06 55.5 88 37.5
Oeu035951.1 Olea europaea HOM05D000034 ORTHO05D000037 3.0e-06 55.5 99 34.3
MBI06_g13407_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 3.9e-06 55.1 105 37.1
MBI08_g29137_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 5.1e-06 54.7 108 35.2
EL10Ac4g09713 Beta vulgaris HOM05D000034 ORTHO05D000037 6.7e-06 54.3 101 33.7
Os06g0190950 Oryza sativa ssp. japonica HOM05D000034 ORTHO05D000037 6.7e-06 54.3 103 33.0
CANSAT01G1210 Cannabis sativa HOM05D000034 ORTHO05D000037 8.7e-06 53.9 100 32.0
CANSAT21G1727 Cannabis sativa HOM05D000034 ORTHO05D000037 8.7e-06 53.9 100 32.0
CANSAT64G2284 Cannabis sativa HOM05D000034 ORTHO05D000037 8.7e-06 53.9 100 32.0
LjContig00141g0023111 Lotus japonicus HOM05D000034 ORTHO05D000037 8.7e-06 53.9 98 30.6
MBI03_g24253_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000037 8.7e-06 53.9 98 34.7
MBI17_g01576_MAGBIO Magnolia biondii HOM05D000034 ORTHO05D000140 8.7e-06 53.9 104 38.5
TPR.G8625 Trifolium pratense HOM05D000034 ORTHO05D000037 8.7e-06 53.9 109 33.0


User provided reference genes

Program Settings