Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P318T15 Lonicera japonica HOM05D002851 ORTHO05D003084 9.8e-71 270.0 135 100.0
CSS0042051 Camellia sinensis var. sinensis HOM05D002851 ORTHO05D003084 1.2e-15 87.0 134 44.8
Lj7P671T19 Lonicera japonica HOM05D002851 ORTHO05D003084 4.5e-15 85.1 105 48.6
CSS0042934 Camellia sinensis var. sinensis HOM05D002851 ORTHO05D003084 4.9e-14 81.6 134 43.3
Hma1.2p1_2738F.1_g327690 Hydrangea macrophylla HOM05D002851 ORTHO05D003084 5.5e-13 78.2 130 40.8
Hma1.2p1_1074F.1_g254330 Hydrangea macrophylla HOM05D002851 ORTHO05D003084 7.1e-13 77.8 130 40.8
Prupe.7G214800 Prunus persica HOM05D002851 ORTHO05D003084 2.5e-10 69.3 103 37.9
Actinidia39749 Actinidia chinensis HOM05D002851 ORTHO05D003084 9.6e-10 67.4 135 41.5
DCAR_028629 Daucus carota HOM05D002851 ORTHO05D003084 4.8e-09 65.1 70 52.9
Rhsim03G0234800 Rhododendron simsii HOM05D002851 ORTHO05D003084 4.8e-09 65.1 70 55.7
MD15G1202400 Malus domestica HOM05D002851 ORTHO05D003084 8.2e-09 64.3 144 39.6
MBI01_g16576_MAGBIO Magnolia biondii HOM05D002851 ORTHO05D003084 3.1e-08 62.4 125 39.2
MELO3C015440.2 Cucumis melo HOM05D002851 ORTHO05D003084 5.3e-08 61.6 65 53.8
Duzib187G0612 Durio zibethinus HOM05D002851 ORTHO05D003084 5.3e-08 61.6 64 50.0
Thecc.09G094400 Theobroma cacao HOM05D002851 ORTHO05D003084 6.9e-08 61.2 66 48.5
TWI63G1263 Tripterygium wilfordii HOM05D002851 ORTHO05D003084 6.9e-08 61.2 47 57.4
ClCG03G015860 Citrullus lanatus HOM05D002851 ORTHO05D003084 9.0e-08 60.8 122 39.3
CANSAT64G0550 Cannabis sativa HOM05D002851 ORTHO05D003084 1.2e-07 60.5 54 55.6
Dinv36731 Davidia involucrata HOM05D002851 ORTHO05D003084 1.2e-07 60.5 134 35.8
vmacro06272 Vaccinium macrocarpon HOM05D002851 ORTHO05D003084 2.0e-07 59.7 49 57.1
Nitab4.5_0017633g0010 Nicotiana tabacum HOM05D002851 ORTHO05D003084 2.6e-07 59.3 79 38.0
AUR62037484 Chenopodium quinoa HOM05D002851 ORTHO05D003084 3.4e-07 58.9 60 51.7
Cc06_g10950 Coffea canephora HOM05D002851 ORTHO05D003084 3.4e-07 58.9 124 38.7
CsaV3_1G040120 Cucumis sativus L. HOM05D002851 ORTHO05D003084 3.4e-07 58.9 65 50.8
HanXRQChr12g0355311 Helianthus annuus HOM05D002851 ORTHO05D003084 3.4e-07 58.9 99 36.4
Nitab4.5_0007607g0040 Nicotiana tabacum HOM05D002851 ORTHO05D003084 3.4e-07 58.9 111 34.2
PSO210G0738 Papaver somniferum HOM05D002851 ORTHO05D003084 3.4e-07 58.9 98 37.8
PSO210G6301 Papaver somniferum HOM05D002851 ORTHO05D003084 3.4e-07 58.9 102 36.3
Gohir.A08G244600 Gossypium hirsutum HOM05D002851 ORTHO05D003084 4.5e-07 58.5 121 35.5
AUR62004767 Chenopodium quinoa HOM05D002851 ORTHO05D003084 5.8e-07 58.2 60 50.0
Eucgr.L03533 Eucalyptus grandis HOM05D002851 ORTHO05D003084 5.8e-07 58.2 47 57.4
CsaV3_UNG050390 Cucumis sativus L. HOM05D002851 ORTHO05D003084 7.6e-07 57.8 88 38.6
Hund13135 Selenicereus undatus HOM05D002851 ORTHO05D003084 1.0e-06 57.4 64 50.0
EL10Ac7g15865 Beta vulgaris HOM05D002851 ORTHO05D003084 1.7e-06 56.6 65 49.2
SGA_v2.0_scaffold2G00995 Striga asiatica HOM05D002851 ORTHO05D003084 1.7e-06 56.6 63 47.6
Aa31LG2G21030 Aethionema arabicum HOM05D002851 ORTHO05D003084 2.2e-06 56.2 65 43.1
Ah.06g191610 Amaranthus hybridus HOM05D002851 ORTHO05D003084 2.2e-06 56.2 67 47.8
COL.COLO4_18243 Corchorus olitorius HOM05D002851 ORTHO05D003084 2.2e-06 56.2 64 42.2
Haze_25868 Corylus avellana HOM05D002851 ORTHO05D003084 2.2e-06 56.2 127 35.4
Aqoxy7G03927 Aquilegia oxysepala HOM05D002851 ORTHO05D003084 2.9e-06 55.8 139 36.0
Ca_24175_v3 Cicer arietinum L. HOM05D002851 ORTHO05D003084 2.9e-06 55.8 81 39.5
PGR142G3716 Punica granatum HOM05D002851 ORTHO05D003084 2.9e-06 55.8 85 40.0
Ciclev10009026m.g Citrus clementina HOM05D002851 ORTHO05D003084 3.8e-06 55.5 100 36.0
Gohir.D08G265500 Gossypium hirsutum HOM05D002851 ORTHO05D003084 3.8e-06 55.5 121 36.4
Gorai.004G283500 Gossypium raimondii HOM05D002851 ORTHO05D003084 3.8e-06 55.5 121 36.4
Nitab4.5_0029443g0010 Nicotiana tabacum HOM05D002851 ORTHO05D003084 3.8e-06 55.5 117 31.6
THA.LOC104803991 Tarenaya hassleriana HOM05D002851 ORTHO05D003084 3.8e-06 55.5 49 51.0
Manes.16G105200 Manihot esculenta HOM05D002851 ORTHO05D003084 4.9e-06 55.1 125 30.4
Peaxi162Scf00078g01324 Petunia axillaris HOM05D002851 ORTHO05D003084 4.9e-06 55.1 55 43.6
CDE07G1356 Ceratophyllum demersum HOM05D002851 ORTHO05D003084 6.5e-06 54.7 48 47.9
ECA234G3685 Erigeron canadensis HOM05D002851 ORTHO05D003084 8.4e-06 54.3 112 30.4
Sed0010089 Sechium edule HOM05D002851 ORTHO05D003084 8.4e-06 54.3 126 41.3


User provided reference genes

Program Settings