Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P191T41 Lonicera japonica HOM05D005372 ORTHO05D006593 4.9e-51 204.5 131 100.0
Migut.K01340 Erythranthe guttata HOM05D005372 ORTHO05D006593 5.5e-26 121.3 99 59.6
Eucgr.J01954 Eucalyptus grandis HOM05D005372 ORTHO05D006593 1.6e-25 119.8 96 88.5
PSO541G6474 Papaver somniferum HOM05D005372 ORTHO05D006593 2.1e-25 119.4 97 60.8
PSO675G4385 Papaver somniferum HOM05D005372 ORTHO05D006593 2.1e-25 119.4 97 60.8
Cpa.g.sc112.93 Carica papaya HOM05D005372 ORTHO05D006593 3.5e-25 118.6 96 71.9
THA.LOC104799412 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 3.5e-25 118.6 52 96.2
Dinv17075 Davidia involucrata HOM05D005372 ORTHO05D006593 4.6e-25 118.2 52 96.2
Dinv43019 Davidia involucrata HOM05D005372 ORTHO05D006593 4.6e-25 118.2 52 96.2
Dinv43078 Davidia involucrata HOM05D005372 ORTHO05D006593 4.6e-25 118.2 52 96.2
SGA_v2.0_scaffold35G14025 Striga asiatica HOM05D005372 ORTHO05D006593 4.6e-25 118.2 100 71.0
THA.LOC104810736 Tarenaya hassleriana HOM05D005372 ORTHO05D006593 7.9e-25 117.5 52 94.2
Haze_24230 Corylus avellana HOM05D005372 ORTHO05D006593 1.3e-24 116.7 114 75.4
PGR119G2477 Punica granatum HOM05D005372 ORTHO05D006593 1.3e-24 116.7 100 78.0
Dinv34320 Davidia involucrata HOM05D001226 ORTHO05D006593 1.8e-24 116.3 52 94.2
TWI75G1302 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 1.8e-24 116.3 52 94.2
Peaxi162Scf01058g00152 Petunia axillaris HOM05D005372 ORTHO05D006593 2.3e-24 115.9 100 84.0
SGA_v2.0_scaffold8G04342 Striga asiatica HOM05D005372 ORTHO05D006593 2.3e-24 115.9 99 66.7
TAR636G0867 Trochodendron aralioides HOM05D005372 ORTHO05D006593 2.3e-24 115.9 103 63.1
Duzib168G1893 Durio zibethinus HOM05D005372 ORTHO05D006593 3.0e-24 115.5 102 68.6
Hma1.2p1_0543F.1_g175310 Hydrangea macrophylla HOM05D005372 ORTHO05D006593 3.0e-24 115.5 97 85.6
TWI79G0177 Tripterygium wilfordii HOM05D005372 ORTHO05D006593 3.0e-24 115.5 52 94.2
CANSAT54G2064 Cannabis sativa HOM05D005372 ORTHO05D006593 5.1e-24 114.8 102 70.6
Cfa011626 Carpinus fangiana HOM05D005372 ORTHO05D006593 5.1e-24 114.8 97 85.6
CiPaw.14G062800 Carya illinoinensis HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 90.4
DCAR_028257 Daucus carota HOM05D005372 ORTHO05D006593 5.1e-24 114.8 98 78.6
MD03G1080100 Malus domestica HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 94.2
MD11G1084700 Malus domestica HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 94.2
Nn3g19715 Nelumbo nucifera HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 94.2
Oeu017419.1 Olea europaea HOM05D005372 ORTHO05D006593 5.1e-24 114.8 103 81.6
Prupe.6G065000 Prunus persica HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 94.2
Thecc.09G309200 Theobroma cacao HOM05D005372 ORTHO05D006593 5.1e-24 114.8 52 90.4
MSTRG.14035 Avicennia marina HOM05D005372 ORTHO05D006593 6.7e-24 114.4 99 57.6
ECA247G0538 Erigeron canadensis HOM05D005372 ORTHO05D006593 6.7e-24 114.4 52 92.3
Lsat_1_v5_gn_9_25321 Lactuca sativa HOM05D005372 ORTHO05D006593 6.7e-24 114.4 52 92.3
QL01p028939 Quercus lobata HOM05D005372 ORTHO05D006593 6.7e-24 114.4 98 80.6
Aqoxy4G02649 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 8.7e-24 114.0 52 92.3
HanXRQChr04g0109301 Helianthus annuus HOM05D005372 ORTHO05D006593 8.7e-24 114.0 52 90.4
Aa31LG1G11690 Aethionema arabicum HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
CSS0039141 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.1e-23 113.6 113 60.2
FvH4_3g37450 Fragaria vesca HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
FAN11G0559 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
FAN21G1258 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
FAN25G0461 Fragaria x ananassa HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
Gohir.D07G106400 Gossypium hirsutum HOM05D005372 ORTHO05D006593 1.1e-23 113.6 102 58.8
Gorai.001G114500 Gossypium raimondii HOM05D005372 ORTHO05D006593 1.1e-23 113.6 102 58.8
RcHm_v2.0_Chr5g0067341 Rosa chinensis HOM05D005372 ORTHO05D006593 1.1e-23 113.6 52 88.5
BcaB01g04621 Brassica carinata HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
BcaB05g22467 Brassica carinata HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
BcaC03g14063 Brassica carinata HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
A03p11910 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
C02p12980 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
C03p14010 Brassica napus HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
BolC3t13848H Brassica oleracea HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
BraA02t05820Z Brassica rapa HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
BraA03t10503Z Brassica rapa HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
HanXRQChr03g0083951 Helianthus annuus HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
Sp6g20690 Schrenkiella parvula HOM05D005372 ORTHO05D006593 1.5e-23 113.2 52 90.4
AL8G35370 Arabidopsis lyrata HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
AT5G52370 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
AT5G58990 Arabidopsis thaliana HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
A02p07420 Brassica napus HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
CSS0037054 Camellia sinensis var. sinensis HOM05D005372 ORTHO05D006593 1.9e-23 112.8 113 59.3
Carub.0008s1963 Capsella rubella HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
CARHR285220 Cardamine hirsuta HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
Nitab4.5_0002718g0040 Nicotiana tabacum HOM05D005372 ORTHO05D006593 1.9e-23 112.8 52 88.5
Atru.chr3.4040 Acer truncatum HOM05D005372 ORTHO05D006593 2.5e-23 112.5 52 88.5
CDE07G0920 Ceratophyllum demersum HOM05D005372 ORTHO05D006593 2.5e-23 112.5 52 90.4
MBI14_g28605_MAGBIO Magnolia biondii HOM05D005372 ORTHO05D006593 2.5e-23 112.5 52 90.4
Lalb_Chr14g0372091 Lupinus albus HOM05D005372 ORTHO05D006593 3.3e-23 112.1 102 67.6
Potri.001G246800 Populus trichocarpa HOM05D005372 ORTHO05D006593 3.3e-23 112.1 52 88.5
BcaB08g36298 Brassica carinata HOM05D005372 ORTHO05D006593 4.3e-23 111.7 52 88.5
Ciclev10029469m.g Citrus clementina HOM05D005372 ORTHO05D006593 4.3e-23 111.7 52 86.5
Cc01_g13660 Coffea canephora HOM05D005372 ORTHO05D006593 4.3e-23 111.7 99 57.6
Thhalv10014944m.g Eutrema salsugineum HOM05D005372 ORTHO05D006593 4.3e-23 111.7 52 86.5
Nitab4.5_0000744g0090 Nicotiana tabacum HOM05D005372 ORTHO05D006593 4.3e-23 111.7 52 86.5
TAR633G2482 Trochodendron aralioides HOM05D005372 ORTHO05D006593 5.6e-23 111.3 52 90.4
FAN16G3555 Fragaria x ananassa HOM05D005372 ORTHO05D006593 7.4e-23 110.9 51 88.2
Phvul.011G039001 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 7.4e-23 110.9 52 88.5
SalBow4G1938 Salvia bowleyana HOM05D005372 ORTHO05D006593 7.4e-23 110.9 99 57.6
unitig_26.g9774 Utricularia gibba HOM05D005372 ORTHO05D006593 7.4e-23 110.9 52 88.5
Aqoxy1G00762 Aquilegia oxysepala HOM05D005372 ORTHO05D006593 9.6e-23 110.5 52 88.5
CAN.G394.95 Capsicum annuum HOM05D005372 ORTHO05D006593 9.6e-23 110.5 97 78.4
Gohir.A07G102200 Gossypium hirsutum HOM05D005372 ORTHO05D006593 9.6e-23 110.5 102 66.7
Nn1g02876 Nelumbo nucifera HOM05D005372 ORTHO05D006593 1.3e-22 110.2 52 88.5
AUR62001715 Chenopodium quinoa HOM05D005372 ORTHO05D006593 1.6e-22 109.8 52 84.6
VMungo1127G1276 Vigna mungo HOM05D005372 ORTHO05D006593 1.6e-22 109.8 52 86.5
Actinidia25121 Actinidia chinensis HOM05D005372 ORTHO05D006593 2.1e-22 109.4 52 84.6
Manes.02G123700 Manihot esculenta HOM05D005372 ORTHO05D006593 2.1e-22 109.4 52 86.5
Lj3g0018318 Lotus japonicus HOM05D005372 ORTHO05D006593 2.8e-22 109.0 52 84.6
PGSC0003DMG400030429 Solanum tuberosum HOM05D005372 ORTHO05D006593 2.8e-22 109.0 99 54.5
EL10Ac7g16097 Beta vulgaris HOM05D005372 ORTHO05D006593 3.7e-22 108.6 52 82.7
Glyma.15G033200 Glycine max HOM05D005372 ORTHO05D006593 3.7e-22 108.6 52 88.5
Potri.009G040100 Populus trichocarpa HOM05D005372 ORTHO05D006593 3.7e-22 108.6 52 84.6
Ah.13g070300 Amaranthus hybridus HOM05D005372 ORTHO05D006593 4.8e-22 108.2 53 81.1
Glyma.13G341200 Glycine max HOM05D005372 ORTHO05D006593 4.8e-22 108.2 52 86.5
Medtr2g097890 Medicago truncatula HOM05D005372 ORTHO05D006593 4.8e-22 108.2 52 84.6
TPR.G6862 Trifolium pratense HOM05D005372 ORTHO05D006593 4.8e-22 108.2 52 84.6
Actinidia08556 Actinidia chinensis HOM05D005372 ORTHO05D006593 6.2e-22 107.8 100 78.0
arahy.Tifrunner.gnm1.ann1.IGF4QT Arachis hypogaea HOM05D005372 ORTHO05D006593 6.2e-22 107.8 52 86.5
arahy.Tifrunner.gnm1.ann1.UR5XNC Arachis hypogaea HOM05D005372 ORTHO05D006593 6.2e-22 107.8 52 86.5
Solyc06g076620.3 Solanum lycopersicum HOM05D005372 ORTHO05D006593 6.2e-22 107.8 99 53.5
Sopen06g033010 Solanum pennellii HOM05D005372 ORTHO05D006593 6.2e-22 107.8 99 53.5
Lalb_Chr24g0397111 Lupinus albus HOM05D005372 ORTHO05D006593 8.1e-22 107.5 101 77.2
Sabra09G0028200 Salix brachista HOM05D005372 ORTHO05D006593 8.1e-22 107.5 52 82.7
Glyma.11G111000 Glycine max HOM05D005372 ORTHO05D006593 1.1e-21 107.1 52 84.6
Rhsim13G0075100 Rhododendron simsii HOM05D005372 ORTHO05D006593 1.1e-21 107.1 68 67.6
Lj6g0015977 Lotus japonicus HOM05D005372 ORTHO05D006593 1.4e-21 106.7 52 82.7
VMungo1127G1643 Vigna mungo HOM05D005372 ORTHO05D006593 1.8e-21 106.3 52 84.6
Phvul.011G206600 Phaseolus vulgaris HOM05D005372 ORTHO05D006593 2.4e-21 105.9 52 82.7
Psat5g285800 Pisum sativum HOM05D005372 ORTHO05D006593 9.0e-21 104.0 52 80.8
ClCG02G019810 Citrullus lanatus HOM05D005372 ORTHO05D006593 1.2e-20 103.6 52 78.8
Sed0010324 Sechium edule HOM05D005372 ORTHO05D006593 1.2e-20 103.6 52 78.8
Hund04902 Selenicereus undatus HOM05D005372 ORTHO05D006593 1.2e-20 103.6 102 50.0
CsaV3_6G016530 Cucumis sativus L. HOM05D005372 ORTHO05D006593 2.0e-20 102.8 52 78.8
MELO3C025881.2 Cucumis melo HOM05D005372 ORTHO05D006593 2.6e-20 102.4 52 78.8
ATR0618G182 Amborella trichopoda HOM05D005372 ORTHO05D006593 6.5e-19 97.8 51 82.4
Os02g0481000 Oryza sativa ssp. japonica HOM05D005372 ORTHO05D006593 4.2e-18 95.1 52 76.9
Zm00001eb066290 Zea mays HOM05D005372 ORTHO05D006593 1.6e-17 93.2 52 75.0
Zm00001eb433670 Zea mays HOM05D005372 ORTHO05D006593 3.5e-17 92.0 50 78.0
SHI05895 Sapria himalayana HOM05D005372 ORTHO05D006593 2.3e-16 89.4 82 52.4
SalBow6G3269 Salvia bowleyana HOM05D005372 ORTHO05D006593 3.7e-14 82.0 99 47.5
Glyma.12G037300 Glycine max HOM05D005372 ORTHO05D006593 8.2e-14 80.9 42 81.0
Sabra16G0149900 Salix brachista HOM05D005372 ORTHO05D006593 1.4e-13 80.1 52 67.3
C09p51220 Brassica napus HOM05D005372 ORTHO05D006593 3.1e-13 79.0 37 89.2
BolC2t07410H Brassica oleracea HOM05D005372 ORTHO05D006593 3.1e-13 79.0 37 89.2
Nitab4.5_0000933g0130 Nicotiana tabacum HOM05D005372 ORTHO05D006593 9.0e-13 77.4 37 86.5
Sc06g0008390 Simmondsia chinensis HOM05D005372 ORTHO05D006593 1.5e-12 76.6 37 83.8
AagrBONN_evm.TU.Sc2ySwM_228.2511 Anthoceros agrestis HOM05D005372 ORTHO05D006593 5.9e-12 74.7 53 60.4
Oeu002454.1 Olea europaea HOM05D005372 ORTHO05D006593 3.8e-11 72.0 35 85.7
Mapoly0002s0283 Marchantia polymorpha HOM05D005372 ORTHO05D006593 5.0e-11 71.6 53 58.5
MD06G1146500 Malus domestica HOM05D005372 ORTHO05D006593 1.1e-10 70.5 37 86.5
Pp3c9_8860 Physcomitrium patens HOM05D005372 ORTHO05D006593 4.2e-10 68.6 53 54.7
CBR_g8222 Chara braunii HOM05D005372 ORTHO05D006593 7.9e-09 64.3 54 50.0
Zm00001eb217580 Zea mays HOM05D000360 ORTHO05D000234 3.9e-08 62.0 38 71.1
Zm00001eb023370 Zea mays HOM05D000798 ORTHO05D000659 1.5e-07 60.1 46 60.9
SMO111G0201 Selaginella moellendorffii HOM05D005372 ORTHO05D006593 4.3e-07 58.5 53 47.2


User provided reference genes

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