Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P136T24 Lonicera japonica HOM05D007578 ORTHO05D009497 4.1e-42 174.9 128 100.0
Cc07_g05400 Coffea canephora HOM05D007578 ORTHO05D009497 1.3e-27 126.7 135 72.6
Nitab4.5_0000108g0140 Nicotiana tabacum HOM05D007578 ORTHO05D009497 2.2e-27 125.9 133 72.2
Nitab4.5_0007463g0020 Nicotiana tabacum HOM05D007578 ORTHO05D009497 6.3e-27 124.4 133 72.2
Peaxi162Scf00535g00071 Petunia axillaris HOM05D007578 ORTHO05D009497 3.1e-26 122.1 120 75.0
MSTRG.23805 Avicennia marina HOM05D007578 ORTHO05D009497 2.0e-25 119.4 133 70.7
TPR.G29848 Trifolium pratense HOM05D007578 ORTHO05D009497 7.7e-25 117.5 122 77.0
Manes.13G132100 Manihot esculenta HOM05D007578 ORTHO05D009497 1.0e-24 117.1 128 77.3
Migut.H00501 Erythranthe guttata HOM05D007578 ORTHO05D009497 2.2e-24 115.9 122 70.5
Psat0s4627g0160 Pisum sativum HOM05D007578 ORTHO05D009497 2.5e-23 112.5 120 77.5
Hma1.2p1_0261F.1_g104930 Hydrangea macrophylla HOM05D007578 ORTHO05D009497 3.2e-23 112.1 130 71.5
Ca_24809_v3 Cicer arietinum L. HOM05D007578 ORTHO05D009497 9.4e-23 110.5 122 69.7
CAN.G836.20 Capsicum annuum HOM05D007578 ORTHO05D009497 1.2e-22 110.2 121 73.6
QL06p044247 Quercus lobata HOM05D007578 ORTHO05D009497 1.6e-22 109.8 129 69.0
PGSC0003DMG400037576 Solanum tuberosum HOM05D007578 ORTHO05D009497 3.6e-22 108.6 120 74.2
Thecc.01G045800 Theobroma cacao HOM05D007578 ORTHO05D009497 4.7e-22 108.2 121 75.2
Solyc02g090100.1 Solanum lycopersicum HOM05D007578 ORTHO05D009497 8.0e-22 107.5 127 70.9
Sopen02g034790 Solanum pennellii HOM05D007578 ORTHO05D009497 8.0e-22 107.5 127 70.9
DCAR_010946 Daucus carota HOM05D007578 ORTHO05D009497 1.0e-21 107.1 120 74.2
Actinidia36527 Actinidia chinensis HOM05D007578 ORTHO05D009497 1.4e-21 106.7 116 76.7
Prupe.7G145300 Prunus persica HOM05D007578 ORTHO05D009497 4.0e-21 105.1 131 70.2
CSS0031523 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 5.2e-21 104.8 120 75.0
CSS0032257 Camellia sinensis var. sinensis HOM05D007578 ORTHO05D009497 5.2e-21 104.8 120 75.0
FAN23G2171 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.7e-21 104.4 125 72.8
FAN26G3047 Fragaria x ananassa HOM05D007578 ORTHO05D009497 6.7e-21 104.4 125 72.8
Gohir.A02G161500 Gossypium hirsutum HOM05D007578 ORTHO05D009497 1.1e-20 103.6 121 66.9
Sed0003773 Sechium edule HOM05D007578 ORTHO05D009497 1.1e-20 103.6 134 67.9
FvH4_1g14510 Fragaria vesca HOM05D007578 ORTHO05D009497 1.5e-20 103.2 126 71.4
SGA_v2.0_scaffold15G07205 Striga asiatica HOM05D007578 ORTHO05D009497 1.5e-20 103.2 134 68.7
Sc03g0001220 Simmondsia chinensis HOM05D007578 ORTHO05D009497 2.0e-20 102.8 131 62.6
Medtr5g018590 Medicago truncatula HOM05D007578 ORTHO05D009497 2.6e-20 102.4 122 68.0
SalBow1G1613 Salvia bowleyana HOM05D007578 ORTHO05D009497 2.6e-20 102.4 121 66.9
Sabra07G0029900 Salix brachista HOM05D007578 ORTHO05D009497 9.7e-20 100.5 133 66.2
CARHR114700 Cardamine hirsuta HOM05D007578 ORTHO05D009497 1.3e-19 100.1 130 68.5
Carub.0004s0288 Capsella rubella HOM05D007578 ORTHO05D009497 1.7e-19 99.8 130 67.7
Gorai.003G019400 Gossypium raimondii HOM05D007578 ORTHO05D009497 2.2e-19 99.4 121 67.8
TAR628G0552 Trochodendron aralioides HOM05D007578 ORTHO05D009497 2.2e-19 99.4 120 72.5
AT2G23670 Arabidopsis thaliana HOM05D007578 ORTHO05D009497 3.7e-19 98.6 122 70.5
Duzib264G1198 Durio zibethinus HOM05D007578 ORTHO05D009497 4.8e-19 98.2 121 72.7
Glyma.11G060900 Glycine max HOM05D007578 ORTHO05D009497 4.8e-19 98.2 122 68.0
C04p52990 Brassica napus HOM05D007578 ORTHO05D009497 8.2e-19 97.4 130 68.5
BolC4t26860H Brassica oleracea HOM05D007578 ORTHO05D009497 8.2e-19 97.4 130 68.5
TAR376G0355 Trochodendron aralioides HOM05D007578 ORTHO05D009497 8.2e-19 97.4 120 70.8
BraA04t17423Z Brassica rapa HOM05D007578 ORTHO05D009497 1.1e-18 97.1 122 72.1
Haze_15166 Corylus avellana HOM05D007578 ORTHO05D009497 1.1e-18 97.1 126 70.6
MELO3C020917.2 Cucumis melo HOM05D007578 ORTHO05D009497 1.1e-18 97.1 125 70.4
Dinv26776 Davidia involucrata HOM05D007578 ORTHO05D009497 1.1e-18 97.1 98 84.7
MD02G1158500 Malus domestica HOM05D007578 ORTHO05D009497 1.1e-18 97.1 126 70.6
AL4G13660 Arabidopsis lyrata HOM05D007578 ORTHO05D009497 1.4e-18 96.7 130 65.4
A04p18050 Brassica napus HOM05D007578 ORTHO05D009497 1.4e-18 96.7 122 71.3
Duzib147G1180 Durio zibethinus HOM05D007578 ORTHO05D009497 1.8e-18 96.3 128 70.3
MD15G1273300 Malus domestica HOM05D007578 ORTHO05D009497 1.8e-18 96.3 132 67.4
PGR102G1240 Punica granatum HOM05D007578 ORTHO05D009497 2.4e-18 95.9 129 68.2
Rhsim06G0070400 Rhododendron simsii HOM05D002920 ORTHO05D009497 2.4e-18 95.9 121 71.1
RcHm_v2.0_Chr2g0103251 Rosa chinensis HOM05D007578 ORTHO05D009497 2.4e-18 95.9 132 67.4
BcaB06g27923 Brassica carinata HOM05D007578 ORTHO05D009497 3.1e-18 95.5 122 70.5
Potri.007G034300 Populus trichocarpa HOM05D007578 ORTHO05D009497 3.1e-18 95.5 133 64.7
Aa31LG7G13200 Aethionema arabicum HOM05D007578 ORTHO05D009497 4.1e-18 95.1 131 64.1
CiPaw.01G029100 Carya illinoinensis HOM05D007578 ORTHO05D009497 9.1e-18 94.0 129 65.9
AUR62027241 Chenopodium quinoa HOM05D003724 ORTHO05D009497 9.1e-18 94.0 127 70.1
FAN19G1163 Fragaria x ananassa HOM05D007578 ORTHO05D009497 9.1e-18 94.0 133 66.9
Lsat_1_v5_gn_3_94000 Lactuca sativa HOM05D007578 ORTHO05D009497 9.1e-18 94.0 117 75.2
Sp4g02640 Schrenkiella parvula HOM05D007578 ORTHO05D009497 9.1e-18 94.0 122 69.7
TWI53G0440 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 9.1e-18 94.0 124 71.0
COL.COLO4_22180 Corchorus olitorius HOM05D007578 ORTHO05D009497 2.0e-17 92.8 128 65.6
Lalb_Chr16g0378091 Lupinus albus HOM05D007578 ORTHO05D009497 2.6e-17 92.4 129 62.8
Lalb_Chr16g0378311 Lupinus albus HOM05D007578 ORTHO05D009497 2.6e-17 92.4 129 62.8
ClCG02G013060 Citrullus lanatus HOM05D007578 ORTHO05D009497 3.5e-17 92.0 127 69.3
EL10Ac6g14844 Beta vulgaris HOM05D007578 ORTHO05D009497 4.5e-17 91.7 123 66.7
Glyma.01G182600 Glycine max HOM05D007578 ORTHO05D009497 4.5e-17 91.7 129 67.4
THA.LOC104804219 Tarenaya hassleriana HOM05D007578 ORTHO05D009497 5.9e-17 91.3 133 65.4
CANSAT01G2356 Cannabis sativa HOM05D007578 ORTHO05D009497 7.7e-17 90.9 122 70.5
CsaV3_2G017140 Cucumis sativus L. HOM05D007578 ORTHO05D009497 7.7e-17 90.9 127 68.5
arahy.Tifrunner.gnm1.ann1.UX6CPD Arachis hypogaea HOM05D007578 ORTHO05D009497 1.7e-16 89.7 128 67.2
Thhalv10000353m.g Eutrema salsugineum HOM05D007578 ORTHO05D009497 2.2e-16 89.4 127 64.6
Gohir.D03G019000 Gossypium hirsutum HOM05D007578 ORTHO05D009497 2.2e-16 89.4 112 67.9
MBI07_g23234_MAGBIO Magnolia biondii HOM05D007578 ORTHO05D009497 2.2e-16 89.4 127 67.7
Ah.03g142130 Amaranthus hybridus HOM05D007578 ORTHO05D009497 2.9e-16 89.0 136 64.0
arahy.Tifrunner.gnm1.ann1.25C3YR Arachis hypogaea HOM05D007578 ORTHO05D009497 3.8e-16 88.6 128 66.4
Phvul.002G023600 Phaseolus vulgaris HOM05D007578 ORTHO05D009497 3.8e-16 88.6 122 68.0
FAN28G2485 Fragaria x ananassa HOM05D007578 ORTHO05D009497 1.1e-15 87.0 95 78.9
Peaxi162Scf00150g00132 Petunia axillaris HOM05D007578 ORTHO05D009497 1.1e-15 87.0 102 73.5
Oeu032922.1 Olea europaea HOM05D007578 ORTHO05D009497 1.5e-15 86.7 128 62.5
Dinv39922 Davidia involucrata HOM05D007578 ORTHO05D009497 1.9e-15 86.3 171 55.6
HanXRQChr12g0378461 Helianthus annuus HOM05D007578 ORTHO05D009497 1.9e-15 86.3 116 52.6
Cpa.g.sc15.63 Carica papaya HOM05D007578 ORTHO05D009497 4.2e-15 85.1 122 66.4
Gohir.A11G045100 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.2e-15 84.3 129 64.3
Gohir.D11G048600 Gossypium hirsutum HOM05D007578 ORTHO05D009497 7.2e-15 84.3 129 64.3
Ciclev10026636m.g Citrus clementina HOM05D007578 ORTHO05D009497 1.6e-14 83.2 120 57.5
Aqoxy2G01906 Aquilegia oxysepala HOM05D007578 ORTHO05D009497 1.0e-13 80.5 118 66.9
Gorai.007G052200 Gossypium raimondii HOM05D007578 ORTHO05D009497 1.4e-13 80.1 129 62.8
unitig_21.g20937 Utricularia gibba HOM05D000261 ORTHO05D001168 1.4e-13 80.1 117 64.1
CDE11G1131 Ceratophyllum demersum HOM05D007578 ORTHO05D009497 1.8e-13 79.7 115 60.0
CAN.G1525.2 Capsicum annuum HOM05D007578 ORTHO05D009497 5.2e-13 78.2 114 60.5
HPP92_014833 Vanilla planifolia HOM05D007578 ORTHO05D009497 2.6e-12 75.9 122 54.1
PSO170G5738 Papaver somniferum HOM05D007578 ORTHO05D009497 3.7e-11 72.0 132 61.4
Atru.chr3.471 Acer truncatum HOM05D007578 ORTHO05D009497 6.3e-11 71.2 117 63.2
PSO017G5052 Papaver somniferum HOM05D007578 ORTHO05D009497 6.3e-11 71.2 127 63.0
ECA246G0471 Erigeron canadensis HOM05D007578 ORTHO05D009497 4.1e-10 68.6 108 59.3
ATR0787G067 Amborella trichopoda HOM05D007578 ORTHO05D009497 3.5e-09 65.5 120 54.2
TWI09G1014 Tripterygium wilfordii HOM05D007578 ORTHO05D009497 1.1e-07 60.5 82 79.3
SEGI_26721 Sequoiadendron giganteum HOM05D020219 ORTHO05D023531 3.6e-06 55.5 120 54.2
Rhsim03G0179900 Rhododendron simsii HOM05D003145 ORTHO05D003586 4.7e-06 55.1 36 75.0


User provided reference genes

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