Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P116T76 Lonicera japonica HOM05D005710 ORTHO05D004657 1.2e-77 293.1 150 100.0
CSS0045690 Camellia sinensis var. sinensis HOM05D005710 ORTHO05D004657 1.8e-33 146.4 165 55.8
Hma1.2p1_0481F.1_g161930 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 1.8e-25 119.8 161 48.4
Hma1.2p1_1813F.1_g303710 Hydrangea macrophylla HOM05D005710 ORTHO05D004657 5.3e-25 118.2 161 47.8
Actinidia01981 Actinidia chinensis HOM05D005710 ORTHO05D004657 6.9e-25 117.9 157 49.7
DCAR_011051 Daucus carota HOM05D005710 ORTHO05D004657 2.5e-22 109.4 157 47.8
vmacro18155 Vaccinium macrocarpon HOM05D005710 ORTHO05D004657 2.5e-19 99.4 161 44.7
Rhsim08G0074100 Rhododendron simsii HOM05D005710 ORTHO05D004657 9.7e-19 97.4 162 45.1
Prupe.3G257800 Prunus persica HOM05D005710 ORTHO05D004657 1.6e-18 96.7 160 45.0
Actinidia07818 Actinidia chinensis HOM05D005710 ORTHO05D004657 9.0e-17 90.9 151 41.7
MD00G1156300 Malus domestica HOM05D005710 ORTHO05D004657 1.5e-16 90.1 161 44.7
FAN14G2617 Fragaria x ananassa HOM05D005710 ORTHO05D004657 7.6e-16 87.8 153 45.1
TWI32G0095 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.3e-15 87.0 175 38.9
FvH4_6g47270 Fragaria vesca HOM05D005710 ORTHO05D004657 5.0e-15 85.1 155 43.9
Ciclev10011685m.g Citrus clementina HOM05D005710 ORTHO05D004657 1.9e-14 83.2 150 41.3
Oeu025712.1 Olea europaea HOM05D005710 ORTHO05D004657 1.9e-14 83.2 158 43.0
RcHm_v2.0_Chr2g0166341 Rosa chinensis HOM05D005710 ORTHO05D004657 1.9e-14 83.2 155 42.6
Potri.017G091100 Populus trichocarpa HOM05D005710 ORTHO05D004657 4.2e-14 82.0 157 37.6
Cpa.g.sc14.156 Carica papaya HOM05D005710 ORTHO05D004657 5.5e-14 81.6 171 39.8
Duzib147G0411 Durio zibethinus HOM05D005710 ORTHO05D004657 7.2e-14 81.3 158 37.3
MD09G1062500 Malus domestica HOM05D005710 ORTHO05D004657 2.1e-13 79.7 163 42.9
Thecc.04G091900 Theobroma cacao HOM05D005710 ORTHO05D004657 3.6e-13 79.0 160 37.5
Gohir.D09G010000 Gossypium hirsutum HOM05D005710 ORTHO05D004657 7.9e-13 77.8 143 37.8
CiPaw.04G057600 Carya illinoinensis HOM05D005710 ORTHO05D004657 2.3e-12 76.3 151 42.4
Gorai.006G011600 Gossypium raimondii HOM05D005710 ORTHO05D004657 2.3e-12 76.3 143 38.5
FAN05G5426 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.0e-12 75.9 156 40.4
FAN09G1437 Fragaria x ananassa HOM05D005710 ORTHO05D004657 3.0e-12 75.9 156 40.4
Cfa007637 Carpinus fangiana HOM05D005710 ORTHO05D004657 6.7e-12 74.7 170 40.0
Atru.chr8.406 Acer truncatum HOM05D005710 ORTHO05D004657 1.9e-11 73.2 164 37.2
QL02p039943 Quercus lobata HOM05D005710 ORTHO05D004657 3.3e-11 72.4 167 39.5
Oeu033388.1 Olea europaea HOM05D005710 ORTHO05D004657 5.7e-11 71.6 159 38.4
Lsat_1_v5_gn_3_98801 Lactuca sativa HOM05D005710 ORTHO05D004657 9.7e-11 70.9 155 39.4
TWI34G1348 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.3e-10 70.5 172 36.6
COL.COLO4_03731 Corchorus olitorius HOM05D005710 ORTHO05D004657 1.7e-10 70.1 158 36.7
Gohir.A09G010900 Gossypium hirsutum HOM05D005710 ORTHO05D004657 8.2e-10 67.8 145 35.9
TWI60G1009 Tripterygium wilfordii HOM05D005710 ORTHO05D004657 1.1e-09 67.4 170 34.7
Haze_14462 Corylus avellana HOM05D005710 ORTHO05D004657 1.8e-09 66.6 122 45.1
Duzib187G0917 Durio zibethinus HOM05D005710 ORTHO05D004657 3.1e-09 65.9 155 35.5
Dinv34961 Davidia involucrata HOM05D005710 ORTHO05D004657 6.9e-09 64.7 99 43.4
CANSAT64G1937 Cannabis sativa HOM05D005710 ORTHO05D004657 1.2e-08 63.9 166 32.5
Sabra17G0080200 Salix brachista HOM05D005710 ORTHO05D004657 1.5e-08 63.5 184 32.1
Haze_14452 Corylus avellana HOM05D005710 ORTHO05D004657 4.5e-08 62.0 118 44.1
Manes.02G052100 Manihot esculenta HOM05D005710 ORTHO05D004657 4.5e-08 62.0 167 34.1
CAN.G206.216 Capsicum annuum HOM05D005710 ORTHO05D004657 1.3e-07 60.5 134 32.1
Eucgr.I01977 Eucalyptus grandis HOM05D005710 ORTHO05D004657 5.0e-07 58.5 144 36.1
Lj1g0027832 Lotus japonicus HOM05D005710 ORTHO05D004657 6.5e-07 58.2 171 29.8
PGSC0003DMG400001447 Solanum tuberosum HOM05D005710 ORTHO05D004657 6.5e-07 58.2 142 32.4
TAR629G0087 Trochodendron aralioides HOM05D005710 ORTHO05D004657 8.5e-07 57.8 156 33.3
Psat3g200880 Pisum sativum HOM05D005710 ORTHO05D004657 3.2e-06 55.8 167 31.7
Manes.01G098200 Manihot esculenta HOM05D005710 ORTHO05D004657 4.2e-06 55.5 168 33.9
HanXRQChr15g0473071 Helianthus annuus HOM05D005710 ORTHO05D004657 9.4e-06 54.3 127 35.4
SalBow7G3425 Salvia bowleyana HOM05D005710 ORTHO05D004657 9.4e-06 54.3 117 35.9


User provided reference genes

Program Settings