Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4P108T23 Lonicera japonica HOM05D004520 ORTHO05D005520 4.2e-101 371.3 183 100.0
Cc00_g24440 Coffea canephora HOM05D004520 ORTHO05D005520 8.7e-14 81.3 181 33.1
Peaxi162Scf00160g01523 Petunia axillaris HOM05D004520 ORTHO05D005520 1.5e-13 80.5 170 38.2
PGR042G0053 Punica granatum HOM05D004520 ORTHO05D005520 2.2e-12 76.6 77 48.1
Dinv44735 Davidia involucrata HOM05D004520 ORTHO05D005520 6.3e-12 75.1 88 47.7
TPR.G39080 Trifolium pratense HOM05D004520 ORTHO05D005520 3.1e-11 72.8 72 48.6
Gorai.010G044800 Gossypium raimondii HOM05D004520 ORTHO05D005520 4.1e-11 72.4 185 34.6
Lj1g0026094 Lotus japonicus HOM05D004520 ORTHO05D005520 4.1e-11 72.4 150 36.7
TWI12G0901 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 6.9e-11 71.6 100 38.0
Duzib041G0092 Durio zibethinus HOM05D004520 ORTHO05D005520 9.0e-11 71.2 178 33.7
Duzib041G0365 Durio zibethinus HOM05D004520 ORTHO05D005520 1.2e-10 70.9 182 31.9
Potri.002G092000 Populus trichocarpa HOM05D004520 ORTHO05D005520 1.2e-10 70.9 109 39.4
COL.COLO4_16491 Corchorus olitorius HOM05D004520 ORTHO05D005520 2.0e-10 70.1 124 36.3
CiPaw.06G022900 Carya illinoinensis HOM05D004520 ORTHO05D005520 2.6e-10 69.7 83 47.0
Potri.005G166900 Populus trichocarpa HOM05D004520 ORTHO05D005520 2.6e-10 69.7 208 27.9
TWI56G1051 Tripterygium wilfordii HOM05D004520 ORTHO05D005520 3.4e-10 69.3 84 45.2
CiPaw.05G232200 Carya illinoinensis HOM05D004520 ORTHO05D005520 4.5e-10 68.9 93 41.9
Prupe.1G510900 Prunus persica HOM05D004520 ORTHO05D005520 4.5e-10 68.9 134 34.3
Medtr5g061650 Medicago truncatula HOM05D004520 ORTHO05D005520 5.9e-10 68.6 72 48.6
Sabra05G0127200 Salix brachista HOM05D004520 ORTHO05D005520 5.9e-10 68.6 77 45.5
CSS0017832 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 7.7e-10 68.2 109 40.4
CSS0031359 Camellia sinensis var. sinensis HOM05D004520 ORTHO05D005520 7.7e-10 68.2 109 40.4
MBI02_g37831_MAGBIO Magnolia biondii HOM05D004520 ORTHO05D005520 1.0e-09 67.8 76 48.7
Psat2g075760 Pisum sativum HOM05D004520 ORTHO05D005520 1.0e-09 67.8 67 49.3
Duzib093G1357 Durio zibethinus HOM05D004520 ORTHO05D005520 1.3e-09 67.4 145 34.5
Gohir.A06G039100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 1.3e-09 67.4 96 38.5
QL12p035753 Quercus lobata HOM05D004520 ORTHO05D005520 1.7e-09 67.0 116 37.1
Gohir.A02G075405 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.2e-09 66.6 67 49.3
Gohir.D02G082633 Gossypium hirsutum HOM05D004520 ORTHO05D005520 2.2e-09 66.6 67 49.3
Gorai.005G092700 Gossypium raimondii HOM05D004520 ORTHO05D005520 2.2e-09 66.6 67 49.3
Sopen04g028850 Solanum pennellii HOM05D004520 ORTHO05D005520 2.2e-09 66.6 78 47.4
TPR.G34 Trifolium pratense HOM05D004520 ORTHO05D005520 2.2e-09 66.6 72 45.8
BcaC05g26135 Brassica carinata HOM05D004520 ORTHO05D005520 2.9e-09 66.2 173 30.6
Cfa015929 Carpinus fangiana HOM05D004520 ORTHO05D005520 3.8e-09 65.9 164 34.1
Prupe.1G552400 Prunus persica HOM05D004520 ORTHO05D005520 3.8e-09 65.9 81 43.2
Solyc04g072650.1 Solanum lycopersicum HOM05D004520 ORTHO05D005520 3.8e-09 65.9 87 41.4
A07p14760 Brassica napus HOM05D004520 ORTHO05D005520 5.0e-09 65.5 171 30.4
Ciclev10003829m.g Citrus clementina HOM05D004520 ORTHO05D005520 6.5e-09 65.1 69 44.9
Gohir.D06G040100 Gossypium hirsutum HOM05D004520 ORTHO05D005520 6.5e-09 65.1 166 33.1
RcHm_v2.0_Chr7g0240121 Rosa chinensis HOM05D004520 ORTHO05D005520 6.5e-09 65.1 97 40.2
Thecc.08G113300 Theobroma cacao HOM05D004520 ORTHO05D005520 6.5e-09 65.1 184 30.4
MELO3C022816.2 Cucumis melo HOM05D004520 ORTHO05D005520 8.5e-09 64.7 58 55.2
FAN13G2359 Fragaria x ananassa HOM05D004520 ORTHO05D005520 1.1e-08 64.3 120 37.5
Peaxi162Scf00168g00043 Petunia axillaris HOM05D004520 ORTHO05D005520 1.1e-08 64.3 181 35.4
Lalb_Chr10g0102151 Lupinus albus HOM05D004520 ORTHO05D005520 1.4e-08 63.9 69 46.4
BcaB07g32230 Brassica carinata HOM05D004520 ORTHO05D005520 1.9e-08 63.5 102 35.3
A09p42670 Brassica napus HOM05D004520 ORTHO05D005520 1.9e-08 63.5 135 31.9
BraA09t39742Z Brassica rapa HOM05D004520 ORTHO05D005520 1.9e-08 63.5 135 31.9
CsaV3_5G023810 Cucumis sativus L. HOM05D004520 ORTHO05D005520 1.9e-08 63.5 58 55.2
Duzib116G0626 Durio zibethinus HOM05D004520 ORTHO05D005520 1.9e-08 63.5 127 33.1
BcaB03g14234 Brassica carinata HOM05D004520 ORTHO05D005520 2.5e-08 63.2 116 30.2
Glyma.14G168100 Glycine max HOM05D004520 ORTHO05D005520 2.5e-08 63.2 114 41.2
MD15G1363200 Malus domestica HOM05D004520 ORTHO05D005520 2.5e-08 63.2 71 42.3
FvH4_5g38140 Fragaria vesca HOM05D004520 ORTHO05D000031 3.2e-08 62.8 80 42.5
Gorai.009G282400 Gossypium raimondii HOM05D004520 ORTHO05D005520 3.2e-08 62.8 115 40.9
Oeu024567.1 Olea europaea HOM05D004520 ORTHO05D005520 3.2e-08 62.8 181 30.4
Aa31LG7G6090 Aethionema arabicum HOM05D004520 ORTHO05D005520 4.2e-08 62.4 68 42.6
C05p21170 Brassica napus HOM05D004520 ORTHO05D005520 4.2e-08 62.4 175 30.3
FAN08G3230 Fragaria x ananassa HOM05D004520 ORTHO05D005520 4.2e-08 62.4 94 40.4
FAN18G4472 Fragaria x ananassa HOM05D004520 ORTHO05D005520 4.2e-08 62.4 78 43.6
arahy.Tifrunner.gnm1.ann1.1581IW Arachis hypogaea HOM05D004520 ORTHO05D005520 5.5e-08 62.0 146 35.6
BolC5t30811H Brassica oleracea HOM05D004520 ORTHO05D005520 5.5e-08 62.0 173 30.1
BolC7t42702H Brassica oleracea HOM05D004520 ORTHO05D005520 5.5e-08 62.0 102 35.3
ClCG03G008910 Citrullus lanatus HOM05D004520 ORTHO05D005520 5.5e-08 62.0 75 42.7
Gohir.A05G268200 Gossypium hirsutum HOM05D004520 ORTHO05D005520 5.5e-08 62.0 111 38.7
arahy.Tifrunner.gnm1.ann1.8K5I59 Arachis hypogaea HOM05D004520 ORTHO05D005520 7.2e-08 61.6 74 44.6
SalBow7G1906 Salvia bowleyana HOM05D004520 ORTHO05D005520 7.2e-08 61.6 88 44.3
BraA07t29221Z Brassica rapa HOM05D004520 ORTHO05D005520 9.4e-08 61.2 171 30.4
Migut.N02919 Erythranthe guttata HOM05D004520 ORTHO05D005520 9.4e-08 61.2 112 32.1
Gohir.D05G269800 Gossypium hirsutum HOM05D004520 ORTHO05D005520 9.4e-08 61.2 115 40.0
Lsat_1_v5_gn_9_44740 Lactuca sativa HOM05D004520 ORTHO05D005520 9.4e-08 61.2 177 32.8
MD08G1176500 Malus domestica HOM05D004520 ORTHO05D005520 9.4e-08 61.2 99 35.4
Nitab4.5_0002534g0030 Nicotiana tabacum HOM05D004520 ORTHO05D005520 9.4e-08 61.2 118 37.3
Rhsim06G0085800 Rhododendron simsii HOM05D004520 ORTHO05D005520 1.2e-07 60.8 102 37.3
MD15G1408400 Malus domestica HOM05D004520 ORTHO05D005520 1.6e-07 60.5 76 42.1
Manes.02G156600 Manihot esculenta HOM05D004520 ORTHO05D005520 1.6e-07 60.5 67 43.3
Phvul.008G170000 Phaseolus vulgaris HOM05D004520 ORTHO05D005520 1.6e-07 60.5 157 31.2
AT1G22110 Arabidopsis thaliana HOM05D004520 ORTHO05D005520 2.1e-07 60.1 83 38.6
Carub.0001s2166 Capsella rubella HOM05D004520 ORTHO05D005520 2.1e-07 60.1 106 36.8
Glyma.13G086100 Glycine max HOM05D004520 ORTHO05D005520 2.1e-07 60.1 65 49.2
CARHR022460 Cardamine hirsuta HOM05D004520 ORTHO05D005520 2.7e-07 59.7 66 43.9
Ca_05234_v3 Cicer arietinum L. HOM05D004520 ORTHO05D005520 2.7e-07 59.7 72 44.4
Haze_00561 Corylus avellana HOM05D004520 ORTHO05D005520 2.7e-07 59.7 159 30.8
SalBow6G4633 Salvia bowleyana HOM05D004520 ORTHO05D005520 3.6e-07 59.3 172 33.7
PGSC0003DMG400027533 Solanum tuberosum HOM05D004520 ORTHO05D005520 4.6e-07 58.9 123 37.4
AL1G35550 Arabidopsis lyrata HOM05D004520 ORTHO05D005520 6.1e-07 58.5 66 43.9
CARHR071410 Cardamine hirsuta HOM05D004520 ORTHO05D005520 6.1e-07 58.5 78 41.0
FAN04G1722 Fragaria x ananassa HOM05D004520 ORTHO05D005520 6.1e-07 58.5 118 36.4
Manes.18G070900 Manihot esculenta HOM05D004520 ORTHO05D005520 6.1e-07 58.5 79 35.4
CANSAT25G0040 Cannabis sativa HOM05D004520 ORTHO05D005520 7.9e-07 58.2 64 45.3
CANSAT25G0424 Cannabis sativa HOM05D004520 ORTHO05D005520 7.9e-07 58.2 64 45.3
SalBow6G1129 Salvia bowleyana HOM05D004520 ORTHO05D005520 7.9e-07 58.2 172 33.1
SGA_v2.0_scaffold315G48386 Striga asiatica HOM05D004520 ORTHO05D005520 7.9e-07 58.2 98 37.8
BcaB03g11898 Brassica carinata HOM05D003425 ORTHO05D003897 1.0e-06 57.8 99 36.4
BcaC07g39145 Brassica carinata HOM05D003425 ORTHO05D003897 1.0e-06 57.8 94 38.3
C07p21720 Brassica napus HOM05D004520 ORTHO05D005520 1.0e-06 57.8 102 34.3
BolC8t49777H Brassica oleracea HOM05D004520 ORTHO05D005520 1.0e-06 57.8 161 30.4
Carub.0002s2483 Capsella rubella HOM05D004520 ORTHO05D005520 1.4e-06 57.4 80 45.0
Atru.chr13.1276 Acer truncatum HOM05D004520 ORTHO05D005520 2.3e-06 56.6 153 30.1
Nitab4.5_0006678g0010 Nicotiana tabacum HOM05D004520 ORTHO05D005520 2.3e-06 56.6 178 30.3
Migut.C00189 Erythranthe guttata HOM05D004520 ORTHO05D005520 3.0e-06 56.2 106 35.8
ATR0564G398 Amborella trichopoda HOM05D004520 ORTHO05D005520 8.8e-06 54.7 61 47.5
Duzib170G0788 Durio zibethinus HOM05D004622 ORTHO05D005431 8.8e-06 54.7 83 36.1
MD08G1219800 Malus domestica HOM05D004520 ORTHO05D005520 8.8e-06 54.7 103 35.0
Prupe.1G096600 Prunus persica HOM05D004520 ORTHO05D005520 8.8e-06 54.7 78 35.9


User provided reference genes

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