Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4E117T1 Lonicera japonica HOM05D006599 ORTHO05D008304 1.8e-62 242.3 112 100.0
Thecc.04G093300 Theobroma cacao HOM05D006599 ORTHO05D008304 5.3e-54 214.2 111 84.7
Duzib147G0316 Durio zibethinus HOM05D006599 ORTHO05D008304 9.0e-54 213.4 111 84.7
Nitab4.5_0000565g0260 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.5e-53 212.6 112 83.9
COL.COLO4_21402 Corchorus olitorius HOM05D006599 ORTHO05D008304 2.0e-53 212.2 111 83.8
Peaxi162Scf00166g00058 Petunia axillaris HOM05D006599 ORTHO05D008304 2.6e-53 211.8 112 81.2
Atru.chr8.423 Acer truncatum HOM05D006599 ORTHO05D008304 4.5e-53 211.1 111 83.8
Manes.02G054000 Manihot esculenta HOM05D006599 ORTHO05D008304 7.6e-53 210.3 110 83.6
Nitab4.5_0010051g0050 Nicotiana tabacum HOM05D006599 ORTHO05D008304 1.0e-52 209.9 112 82.1
FvH4_6g47020 Fragaria vesca HOM05D006599 ORTHO05D008304 4.9e-52 207.6 111 82.0
FAN14G4927 Fragaria x ananassa HOM05D006599 ORTHO05D008304 4.9e-52 207.6 111 82.0
Gohir.A11G072300 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.9e-52 207.6 112 81.2
Gohir.D11G076400 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.9e-52 207.6 112 81.2
Gorai.007G082000 Gossypium raimondii HOM05D006599 ORTHO05D008304 4.9e-52 207.6 112 81.2
Sopen02g033440 Solanum pennellii HOM05D006599 ORTHO05D008304 4.9e-52 207.6 112 80.4
Solyc02g088730.2 Solanum lycopersicum HOM05D006599 ORTHO05D008304 6.5e-52 207.2 112 80.4
CSS0025230 Camellia sinensis var. sinensis HOM05D006599 ORTHO05D008304 8.4e-52 206.8 111 84.7
Cfa007654 Carpinus fangiana HOM05D006599 ORTHO05D008304 1.1e-51 206.5 111 81.1
FAN09G1977 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.1e-51 206.5 111 81.1
Haze_14439 Corylus avellana HOM05D006599 ORTHO05D008304 1.4e-51 206.1 111 81.1
TWI34G0408 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 1.9e-51 205.7 111 80.2
PGSC0003DMG400001449 Solanum tuberosum HOM05D006599 ORTHO05D008304 2.5e-51 205.3 112 78.6
TWI32G0394 Tripterygium wilfordii HOM05D006599 ORTHO05D008304 2.5e-51 205.3 111 81.1
CAN.G206.218 Capsicum annuum HOM05D006599 ORTHO05D008304 4.2e-51 204.5 112 79.5
QL02p067958 Quercus lobata HOM05D006599 ORTHO05D008304 4.2e-51 204.5 111 82.0
Thecc.04G093200 Theobroma cacao HOM05D006599 ORTHO05D008304 4.2e-51 204.5 111 80.2
GSVIVG01032932001 Vitis vinifera HOM05D006599 ORTHO05D008304 1.2e-50 203.0 111 84.7
TAR629G1530 Trochodendron aralioides HOM05D006599 ORTHO05D008304 1.6e-50 202.6 110 81.8
FAN05G2816 Fragaria x ananassa HOM05D006599 ORTHO05D008304 3.5e-50 201.4 111 80.2
Hma1.2p1_0481F.1_g162060 Hydrangea macrophylla HOM05D006599 ORTHO05D008304 6.0e-50 200.7 112 82.1
Potri.004G119500 Populus trichocarpa HOM05D006599 ORTHO05D008304 7.9e-50 200.3 110 80.0
Cc07_g04100 Coffea canephora HOM05D006599 ORTHO05D008304 1.0e-49 199.9 111 78.4
Sabra04G0069000 Salix brachista HOM05D006599 ORTHO05D008304 1.0e-49 199.9 110 80.0
FAN02G1129 Fragaria x ananassa HOM05D006599 ORTHO05D008304 1.3e-49 199.5 111 79.3
Potri.017G092800 Populus trichocarpa HOM05D006599 ORTHO05D008304 3.9e-49 198.0 111 79.3
RcHm_v2.0_Chr2g0166081 Rosa chinensis HOM05D006599 ORTHO05D008304 3.9e-49 198.0 111 79.3
Ca_04338_v3 Cicer arietinum L. HOM05D006599 ORTHO05D008304 5.1e-49 197.6 111 76.6
Prupe.3G256500 Prunus persica HOM05D006599 ORTHO05D008304 5.1e-49 197.6 111 79.3
Oeu047780.1 Olea europaea HOM05D006599 ORTHO05D008304 1.1e-48 196.4 112 75.0
Rhsim08G0074600 Rhododendron simsii HOM05D006599 ORTHO05D008304 1.9e-48 195.7 112 77.7
CiPaw.03G089500 Carya illinoinensis HOM05D006599 ORTHO05D008304 3.3e-48 194.9 110 78.2
DCAR_025424 Daucus carota HOM05D006599 ORTHO05D008304 5.7e-48 194.1 112 77.7
Ciclev10012597m.g Citrus clementina HOM05D006599 ORTHO05D008304 7.4e-48 193.7 111 78.4
Nn4g23391 Nelumbo nucifera HOM05D006599 ORTHO05D008304 7.4e-48 193.7 111 76.6
MSTRG.23889 Avicennia marina HOM05D006599 ORTHO05D008304 9.7e-48 193.4 112 77.7
Nn3g17418 Nelumbo nucifera HOM05D006599 ORTHO05D008304 1.3e-47 193.0 111 74.8
PGR083G1582 Punica granatum HOM05D006599 ORTHO05D008304 1.3e-47 193.0 110 78.2
Lalb_Chr17g0337021 Lupinus albus HOM05D006599 ORTHO05D008304 1.6e-47 192.6 111 76.6
Sabra17G0081900 Salix brachista HOM05D006599 ORTHO05D008304 1.6e-47 192.6 111 78.4
Migut.H00636 Erythranthe guttata HOM05D006599 ORTHO05D008304 3.7e-47 191.4 112 74.1
Lj1g0001712 Lotus japonicus HOM05D006599 ORTHO05D008304 4.8e-47 191.0 111 74.8
arahy.Tifrunner.gnm1.ann1.CT2P3Y Arachis hypogaea HOM05D006599 ORTHO05D008304 6.3e-47 190.7 111 75.7
ClCG07G007400 Citrullus lanatus HOM05D006599 ORTHO05D008304 6.3e-47 190.7 111 76.6
MD09G1064500 Malus domestica HOM05D006599 ORTHO05D008304 6.3e-47 190.7 109 78.0
arahy.Tifrunner.gnm1.ann1.24WTBT Arachis hypogaea HOM05D006599 ORTHO05D008304 8.2e-47 190.3 111 75.7
Psat3g201440 Pisum sativum HOM05D006599 ORTHO05D008304 1.1e-46 189.9 111 73.9
Phvul.008G034600 Phaseolus vulgaris HOM05D006599 ORTHO05D008304 1.8e-46 189.1 111 73.9
Sc14g0006220 Simmondsia chinensis HOM05D006599 ORTHO05D008304 1.8e-46 189.1 110 74.5
Gohir.D09G009200 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.1e-46 188.0 111 73.9
Oeu035439.1 Olea europaea HOM05D006599 ORTHO05D008304 5.3e-46 187.6 112 71.4
VMungo1383G0637 Vigna mungo HOM05D006599 ORTHO05D008304 5.3e-46 187.6 111 73.9
Sed0027615 Sechium edule HOM05D006599 ORTHO05D008304 6.9e-46 187.2 110 74.5
Eucgr.J01379 Eucalyptus grandis HOM05D006599 ORTHO05D008304 9.0e-46 186.8 110 71.8
Medtr7g013160 Medicago truncatula HOM05D006599 ORTHO05D008304 9.0e-46 186.8 111 73.0
MELO3C013909.2 Cucumis melo HOM05D006599 ORTHO05D008304 1.2e-45 186.4 111 74.8
ECA232G1145 Erigeron canadensis HOM05D006599 ORTHO05D008304 1.2e-45 186.4 112 75.0
Aqoxy3G00501 Aquilegia oxysepala HOM05D006599 ORTHO05D008304 1.5e-45 186.0 111 73.0
Gorai.006G010900 Gossypium raimondii HOM05D006599 ORTHO05D008304 2.0e-45 185.7 111 73.0
CsaV3_3G002390 Cucumis sativus L. HOM05D006599 ORTHO05D008304 4.5e-45 184.5 111 73.0
Glyma.18G265500 Glycine max HOM05D006599 ORTHO05D008304 4.5e-45 184.5 111 72.1
Gohir.A09G010100 Gossypium hirsutum HOM05D006599 ORTHO05D008304 4.5e-45 184.5 111 73.9
Glyma.08G243300 Glycine max HOM05D006599 ORTHO05D008304 1.7e-44 182.6 111 72.1
CANSAT64G1926 Cannabis sativa HOM05D006599 ORTHO05D008304 2.2e-44 182.2 108 74.1
Lsat_1_v5_gn_3_98261 Lactuca sativa HOM05D006599 ORTHO05D008304 2.2e-44 182.2 112 69.6
TPR.G33427 Trifolium pratense HOM05D006599 ORTHO05D008304 6.5e-44 180.6 111 70.3
HanXRQChr17g0546571 Helianthus annuus HOM05D006599 ORTHO05D008304 1.9e-43 179.1 111 70.3
AT5G39250 Arabidopsis thaliana HOM05D006599 ORTHO05D008304 4.2e-43 177.9 111 70.3
PSO017G0459 Papaver somniferum HOM05D006599 ORTHO05D008304 7.2e-43 177.2 107 72.9
HanXRQChr17g0551751 Helianthus annuus HOM05D006599 ORTHO05D008304 1.2e-42 176.4 112 68.8
CDE10G0620 Ceratophyllum demersum HOM05D006599 ORTHO05D008304 6.1e-42 174.1 107 71.0
Thhalv10027896m.g Eutrema salsugineum HOM05D006599 ORTHO05D008304 1.8e-41 172.6 111 67.6
PSO478G2235 Papaver somniferum HOM05D006599 ORTHO05D008304 3.0e-41 171.8 108 70.4
THA.LOC104823890 Tarenaya hassleriana HOM05D006599 ORTHO05D008304 3.0e-41 171.8 110 68.2
AUR62029230 Chenopodium quinoa HOM05D006599 ORTHO05D008304 5.1e-41 171.0 110 71.8
ATR0064G081 Amborella trichopoda HOM05D006599 ORTHO05D008304 6.7e-41 170.6 108 65.7
Carub.0007s3667 Capsella rubella HOM05D006599 ORTHO05D008304 6.7e-41 170.6 110 65.5
AUR62022778 Chenopodium quinoa HOM05D006599 ORTHO05D008304 8.7e-41 170.2 110 70.9
BcaC02g09687 Brassica carinata HOM05D006599 ORTHO05D008304 1.5e-40 169.5 111 64.9
A04p11970 Brassica napus HOM05D006599 ORTHO05D008304 1.5e-40 169.5 111 64.9
C04p45620 Brassica napus HOM05D006599 ORTHO05D008304 1.5e-40 169.5 111 64.9
BolC4t26144H Brassica oleracea HOM05D006599 ORTHO05D008304 1.5e-40 169.5 111 64.9
BraA04t16862Z Brassica rapa HOM05D006599 ORTHO05D008304 1.5e-40 169.5 111 64.9
SGA_v2.0_scaffold52G19170 Striga asiatica HOM05D006599 ORTHO05D008304 1.9e-40 169.1 113 68.1
AL7G51210 Arabidopsis lyrata HOM05D006599 ORTHO05D008304 2.5e-40 168.7 112 66.1
CARHR263160 Cardamine hirsuta HOM05D006599 ORTHO05D008304 2.5e-40 168.7 111 65.8
Sp7g02740 Schrenkiella parvula HOM05D006599 ORTHO05D008304 2.8e-39 165.2 111 64.0
BcaB06g27283 Brassica carinata HOM05D006599 ORTHO05D008304 3.7e-39 164.9 111 63.1
Manes.01G097300 Manihot esculenta HOM05D006599 ORTHO05D008304 6.3e-39 164.1 88 83.0
Aa31LG9G16680 Aethionema arabicum HOM05D006599 ORTHO05D008304 8.2e-39 163.7 111 64.0
Peaxi162Scf00451g00012 Petunia axillaris HOM05D006599 ORTHO05D008304 1.1e-38 163.3 109 67.0
Peaxi162Scf00451g00005 Petunia axillaris HOM05D006599 ORTHO05D008304 1.4e-35 152.9 109 65.1
Os03g0423000 Oryza sativa ssp. japonica HOM05D006599 ORTHO05D008304 8.8e-33 143.7 108 58.3
HPP92_009527 Vanilla planifolia HOM05D006599 ORTHO05D008304 5.7e-32 141.0 108 60.2
Zm00001eb020180 Zea mays HOM05D006599 ORTHO05D008304 5.7e-32 141.0 108 57.4
unitig_744.g23984 Utricularia gibba HOM05D006599 ORTHO05D008304 1.3e-31 139.8 111 55.9
HPP92_009554 Vanilla planifolia HOM05D006599 ORTHO05D008304 1.3e-31 139.8 111 58.6
SHI25645 Sapria himalayana HOM05D006599 ORTHO05D008304 3.7e-31 138.3 107 56.1
Pp3c13_10960 Physcomitrium patens HOM05D006599 ORTHO05D008304 1.4e-30 136.3 111 56.8
Lsat_1_v5_gn_7_2780 Lactuca sativa HOM05D006599 ORTHO05D008304 2.7e-26 122.1 113 52.2
Mapoly0038s0100 Marchantia polymorpha HOM05D006599 ORTHO05D008304 8.0e-26 120.6 113 50.4
EL10Ac9g22551 Beta vulgaris HOM05D006599 ORTHO05D008304 2.3e-25 119.0 76 65.8
SMO347G0158 Selaginella moellendorffii HOM05D006599 ORTHO05D008304 3.0e-25 118.6 120 47.5
Lalb_Chr10g0093041 Lupinus albus HOM05D006599 ORTHO05D008304 5.3e-22 107.8 54 81.5
MD17G1057800 Malus domestica HOM05D006599 ORTHO05D008304 2.7e-18 95.5 49 75.5
TPR.G10380 Trifolium pratense HOM05D006599 ORTHO05D008304 9.1e-14 80.5 45 75.6


User provided reference genes

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