Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C908T8 Lonicera japonica HOM05D000576 ORTHO05D000368 7.4e-68 260.4 129 100.0
Lju5057A0T61 Lonicera japonica HOM05D000576 ORTHO05D000368 6.9e-66 253.8 129 97.7
Lj8C98T11 Lonicera japonica HOM05D000576 ORTHO05D000368 3.7e-51 204.9 120 87.5
Lj8C98G11 Lonicera japonica HOM05D000576 ORTHO05D000368 1.1e-50 203.4 120 86.7
Peaxi162Scf00454g00229 Petunia axillaris HOM05D000576 ORTHO05D000368 3.6e-22 108.6 124 49.2
Peaxi162Scf00454g00221 Petunia axillaris HOM05D000576 ORTHO05D000368 2.6e-20 102.4 120 47.5
Solyc04g079030.2 Solanum lycopersicum HOM05D000167 ORTHO05D000640 1.1e-18 97.1 116 43.1
Nitab4.5_0005549g0050 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.1e-18 95.1 123 43.1
Nitab4.5_0000397g0190 Nicotiana tabacum HOM05D000576 ORTHO05D000368 3.5e-17 92.0 124 42.7
Migut.I01153 Erythranthe guttata HOM05D000576 ORTHO05D000368 4.6e-17 91.7 129 41.9
Nitab4.5_0000131g0170 Nicotiana tabacum HOM05D000576 ORTHO05D000368 4.6e-17 91.7 118 43.2
QL09p002104 Quercus lobata HOM05D000576 ORTHO05D000368 7.8e-17 90.9 121 41.3
Migut.I01047 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.3e-16 89.4 120 45.0
Nitab4.5_0000068g0490 Nicotiana tabacum HOM05D000576 ORTHO05D000368 2.3e-16 89.4 120 41.7
Migut.N01947 Erythranthe guttata HOM05D000576 ORTHO05D000368 5.0e-16 88.2 130 41.5
Peaxi162Scf00340g00318 Petunia axillaris HOM05D000576 ORTHO05D000368 5.0e-16 88.2 120 41.7
vmacro19410 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 6.6e-16 87.8 116 41.4
Migut.I01059 Erythranthe guttata HOM05D000576 ORTHO05D000368 8.6e-16 87.4 120 43.3
Migut.I01046 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.9e-15 86.3 120 43.3
Migut.I00739 Erythranthe guttata HOM05D000576 ORTHO05D000368 7.3e-15 84.3 124 42.7
Migut.I01156 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.1e-14 82.8 124 41.9
Nitab4.5_0010358g0010 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.1e-13 80.5 140 34.3
Migut.I01154 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.4e-13 80.1 124 36.3
Dinv26720 Davidia involucrata HOM05D000576 ORTHO05D000368 2.3e-13 79.3 115 39.1
Dinv04865 Davidia involucrata HOM05D000576 ORTHO05D000368 8.9e-13 77.4 116 37.1
Cfa013470 Carpinus fangiana HOM05D000576 ORTHO05D000368 1.2e-12 77.0 118 39.0
Lj7P375T27 Lonicera japonica HOM05D000576 ORTHO05D000368 1.2e-12 77.0 63 57.1
vmacro05628 Vaccinium macrocarpon HOM05D000006 ORTHO05D000001 1.2e-12 77.0 119 38.7
Rhsim09G0154700 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.5e-12 76.6 125 38.4
COL.COLO4_19178 Corchorus olitorius HOM05D004149 ORTHO05D005028 2.0e-12 76.3 121 39.7
Peaxi162Scf00215g01211 Petunia axillaris HOM05D000576 ORTHO05D000368 3.4e-12 75.5 128 36.7
Ciclev10031551m.g Citrus clementina HOM05D000576 ORTHO05D000368 4.4e-12 75.1 122 37.7
Dinv01310 Davidia involucrata HOM05D000576 ORTHO05D000368 4.4e-12 75.1 115 38.3
SGA_v2.0_scaffold11G05692 Striga asiatica HOM05D000576 ORTHO05D000368 4.4e-12 75.1 124 37.1
ClCG06G017710 Citrullus lanatus HOM05D000576 ORTHO05D000368 5.8e-12 74.7 122 39.3
Dinv11146 Davidia involucrata HOM05D000576 ORTHO05D000368 7.5e-12 74.3 122 41.8
CsaV3_1G000750 Cucumis sativus L. HOM05D000576 ORTHO05D000368 9.8e-12 73.9 122 39.3
Cc03_g13650 Coffea canephora HOM05D000576 ORTHO05D000368 1.3e-11 73.6 121 35.5
Lj6P729T22 Lonicera japonica HOM05D000576 ORTHO05D000368 1.7e-11 73.2 117 39.3
Sopen04g031670 Solanum pennellii HOM05D000576 ORTHO05D000368 1.7e-11 73.2 80 45.0
MELO3C026220.2 Cucumis melo HOM05D000576 ORTHO05D000368 4.9e-11 71.6 125 38.4
Lalb_Chr06g0172321 Lupinus albus HOM05D000576 ORTHO05D000368 1.1e-10 70.5 117 41.0
Lalb_Chr07g0183351 Lupinus albus HOM05D000576 ORTHO05D000368 1.1e-10 70.5 117 41.0
COL.COLO4_14292 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.2e-10 68.9 120 36.7
COL.COLO4_34465 Corchorus olitorius HOM05D000576 ORTHO05D000368 3.2e-10 68.9 119 35.3
COL.COLO4_14986 Corchorus olitorius HOM05D000576 ORTHO05D000368 1.6e-09 66.6 120 35.8
Migut.M01526 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.6e-09 66.6 124 39.5
Gohir.D08G226100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 1.6e-09 66.6 126 33.3
Gorai.004G240100 Gossypium raimondii HOM05D000576 ORTHO05D000368 1.6e-09 66.6 126 33.3
Migut.I00860 Erythranthe guttata HOM05D000576 ORTHO05D000368 2.0e-09 66.2 126 38.9
Rhsim01G0067400 Rhododendron simsii HOM05D000576 ORTHO05D000368 2.7e-09 65.9 120 34.2
Lj9A565T43 Lonicera japonica HOM05D000576 ORTHO05D000368 3.5e-09 65.5 121 33.9
QL10p005342 Quercus lobata HOM05D000576 ORTHO05D000368 4.6e-09 65.1 117 35.9
Lj9A559T48 Lonicera japonica HOM05D000576 ORTHO05D000368 6.0e-09 64.7 122 36.1
Oeu048256.1 Olea europaea HOM05D000576 ORTHO05D000368 6.0e-09 64.7 120 35.8
Hund00349 Selenicereus undatus HOM05D000576 ORTHO05D000368 6.0e-09 64.7 131 32.1
arahy.Tifrunner.gnm1.ann1.ZMI5M5 Arachis hypogaea HOM05D000576 ORTHO05D000368 7.8e-09 64.3 115 36.5
Cc02_g27910 Coffea canephora HOM05D000576 ORTHO05D000368 7.8e-09 64.3 135 35.6
vmacro02138 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 7.8e-09 64.3 119 34.5
vmacro23074 Vaccinium macrocarpon HOM05D000576 ORTHO05D000368 7.8e-09 64.3 119 34.5
Nitab4.5_0001479g0090 Nicotiana tabacum HOM05D000576 ORTHO05D000368 1.0e-08 63.9 63 47.6
Cc02_g06350 Coffea canephora HOM05D000576 ORTHO05D000368 1.3e-08 63.5 121 36.4
COL.COLO4_13160 Corchorus olitorius HOM05D000576 ORTHO05D000368 2.3e-08 62.8 116 34.5
Gohir.D02G143600 Gossypium hirsutum HOM05D000576 ORTHO05D000368 2.3e-08 62.8 119 34.5
Gorai.005G161100 Gossypium raimondii HOM05D000576 ORTHO05D000368 2.3e-08 62.8 119 34.5
TWI18G0091 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 3.0e-08 62.4 117 33.3
CSS0021660 Camellia sinensis var. sinensis HOM05D000576 ORTHO05D000368 3.9e-08 62.0 117 38.5
TWI31G1446 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 5.0e-08 61.6 117 34.2
CANSAT01G1935 Cannabis sativa HOM05D000576 ORTHO05D000368 8.6e-08 60.8 124 34.7
Gohir.A08G209150 Gossypium hirsutum HOM05D000576 ORTHO05D000368 8.6e-08 60.8 115 33.0
Manes.03G198700 Manihot esculenta HOM05D000576 ORTHO05D000368 8.6e-08 60.8 119 35.3
TWI73G0365 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.6e-08 60.8 129 31.0
Migut.F00694 Erythranthe guttata HOM05D000576 ORTHO05D000368 1.1e-07 60.5 118 33.9
Dinv38504 Davidia involucrata HOM05D000576 ORTHO05D000368 1.5e-07 60.1 127 35.4
SGA_v2.0_scaffold44G16702 Striga asiatica HOM05D000576 ORTHO05D000368 1.5e-07 60.1 120 35.0
Lj5A369G34 Lonicera japonica HOM05D000576 ORTHO05D000368 1.9e-07 59.7 118 36.4
TWI63G0561 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.9e-07 59.7 116 34.5
TWI77G0108 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 1.9e-07 59.7 119 35.3
Hma1.2p1_0183F.1_g081070 Hydrangea macrophylla HOM05D000576 ORTHO05D000368 2.5e-07 59.3 119 36.1
Lj5A109G69 Lonicera japonica HOM05D000576 ORTHO05D000368 2.5e-07 59.3 117 34.2
MSTRG.8963 Avicennia marina HOM05D000576 ORTHO05D000368 4.3e-07 58.5 120 34.2
COL.COLO4_02753 Corchorus olitorius HOM05D000576 ORTHO05D000368 4.3e-07 58.5 121 31.4
Duzib248G1067 Durio zibethinus HOM05D000576 ORTHO05D000368 4.3e-07 58.5 118 33.9
Gohir.D08G134100 Gossypium hirsutum HOM05D000576 ORTHO05D000368 4.3e-07 58.5 120 30.8
QL03p004102 Quercus lobata HOM05D000576 ORTHO05D000368 4.3e-07 58.5 118 36.4
Gorai.004G137200 Gossypium raimondii HOM05D000576 ORTHO05D000368 5.6e-07 58.2 120 30.8
Rhsim08G0187200 Rhododendron simsii HOM05D000576 ORTHO05D000368 5.6e-07 58.2 119 31.1
Dinv11096 Davidia involucrata HOM05D000576 ORTHO05D000368 7.3e-07 57.8 71 47.9
EL10Ac5g11365 Beta vulgaris HOM05D000576 ORTHO05D000368 1.2e-06 57.0 116 31.9
Rhsim08G0184100 Rhododendron simsii HOM05D000576 ORTHO05D000368 1.2e-06 57.0 74 43.2
Hund16546 Selenicereus undatus HOM05D000576 ORTHO05D000368 1.2e-06 57.0 115 33.0
Thecc.03G006600 Theobroma cacao HOM05D000576 ORTHO05D000368 1.2e-06 57.0 119 36.1
Dinv21743 Davidia involucrata HOM05D000576 ORTHO05D000368 2.8e-06 55.8 118 33.1
TAR636G3326 Trochodendron aralioides HOM05D000576 ORTHO05D000368 2.8e-06 55.8 124 33.1
Glyma.05G047000 Glycine max HOM05D000576 ORTHO05D000368 3.6e-06 55.5 111 36.9
Lsat_1_v5_gn_9_62101 Lactuca sativa HOM05D000576 ORTHO05D000368 3.6e-06 55.5 108 32.4
VMungo1215G3115 Vigna mungo HOM05D000576 ORTHO05D000368 3.6e-06 55.5 117 37.6
Actinidia23749 Actinidia chinensis HOM05D000576 ORTHO05D000368 4.7e-06 55.1 127 33.9
CSS0024519 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 4.7e-06 55.1 128 34.4
CSS0023267 Camellia sinensis var. sinensis HOM05D026628 ORTHO05D000368 6.2e-06 54.7 124 32.3
HanXRQChr08g0221771 Helianthus annuus HOM05D000576 ORTHO05D000368 6.2e-06 54.7 118 33.1
TWI32G0666 Tripterygium wilfordii HOM05D000576 ORTHO05D000368 8.1e-06 54.3 119 32.8


User provided reference genes

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