Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C809G7 Lonicera japonica HOM05D006640 ORTHO05D008078 4.7e-61 237.7 118 100.0
CSS0011114 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 2.5e-38 162.2 114 69.3
Dinv27390 Davidia involucrata HOM05D006640 ORTHO05D008078 7.3e-38 160.6 145 60.0
Hma1.2p1_0612F.1_g188900 Hydrangea macrophylla HOM05D006640 ORTHO05D008078 2.0e-35 152.5 102 70.6
Atru.chr3.582 Acer truncatum HOM05D006640 ORTHO05D008078 1.3e-34 149.8 101 74.3
Ciclev10002549m.g Citrus clementina HOM05D006640 ORTHO05D008078 1.7e-34 149.4 145 53.1
vmacro05542 Vaccinium macrocarpon HOM05D006640 ORTHO05D008078 3.8e-34 148.3 145 55.9
GSVIVG01013394001 Vitis vinifera HOM05D006640 ORTHO05D008078 6.4e-34 147.5 145 55.9
Potri.005G253200 Populus trichocarpa HOM05D006640 ORTHO05D008078 8.4e-34 147.1 147 56.5
Migut.E01492 Erythranthe guttata HOM05D006640 ORTHO05D008078 4.1e-33 144.8 103 68.0
CSS0000785 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 9.2e-33 143.7 102 67.6
Cc10_g14910 Coffea canephora HOM05D006640 ORTHO05D008078 1.6e-32 142.9 102 68.6
Oeu011315.3 Olea europaea HOM05D006640 ORTHO05D008078 3.5e-32 141.7 151 53.0
Manes.13G069100 Manihot esculenta HOM05D006640 ORTHO05D008078 6.0e-32 141.0 101 67.3
Lj6g0027905 Lotus japonicus HOM05D006640 ORTHO05D008078 3.9e-31 138.3 102 64.7
QL02p015123 Quercus lobata HOM05D006640 ORTHO05D008078 3.9e-31 138.3 102 61.8
CAN.G1138.9 Capsicum annuum HOM05D006640 ORTHO05D008078 5.1e-31 137.9 102 65.7
ClCG02G003390 Citrullus lanatus HOM05D006640 ORTHO05D008078 5.1e-31 137.9 145 52.4
Eucgr.F01788 Eucalyptus grandis HOM05D006640 ORTHO05D008078 6.6e-31 137.5 145 49.7
Lalb_Chr01g0007731 Lupinus albus HOM05D006640 ORTHO05D008078 1.5e-30 136.3 102 58.8
MELO3C013247.2 Cucumis melo HOM05D006640 ORTHO05D008078 1.9e-30 136.0 145 51.7
CsaV3_7G001930 Cucumis sativus L. HOM05D006640 ORTHO05D008078 1.9e-30 136.0 145 51.0
MD15G1440200 Malus domestica HOM05D006640 ORTHO05D008078 1.9e-30 136.0 103 67.0
Solyc04g082560.4 Solanum lycopersicum HOM05D001842 ORTHO05D001849 2.5e-30 135.6 145 49.7
Sopen04g036190 Solanum pennellii HOM05D006640 ORTHO05D008078 4.3e-30 134.8 102 61.8
Thecc.03G029100 Theobroma cacao HOM05D006640 ORTHO05D008078 5.6e-30 134.4 102 63.7
Cpa.g.sc26.165 Carica papaya HOM05D006640 ORTHO05D008078 7.3e-30 134.0 101 63.4
DCAR_013930 Daucus carota HOM05D006640 ORTHO05D008078 7.3e-30 134.0 103 68.0
EL10Ac3g05131 Beta vulgaris HOM05D006640 ORTHO05D008078 9.6e-30 133.7 145 49.0
CSS0028139 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 1.6e-29 132.9 100 65.0
Duzib205G0266 Durio zibethinus HOM05D006640 ORTHO05D008078 4.7e-29 131.3 102 60.8
TAR625G0363 Trochodendron aralioides HOM05D006640 ORTHO05D008078 4.7e-29 131.3 102 60.8
MSTRG.990 Avicennia marina HOM05D006640 ORTHO05D008078 6.2e-29 131.0 102 62.7
CiPaw.07G136100 Carya illinoinensis HOM05D006640 ORTHO05D008078 8.1e-29 130.6 102 54.9
Cfa020797 Carpinus fangiana HOM05D006640 ORTHO05D008078 1.1e-28 130.2 102 57.8
Solyc08g069130.1 Solanum lycopersicum HOM05D006640 ORTHO05D008078 1.1e-28 130.2 102 59.8
Medtr4g032370 Medicago truncatula HOM05D006640 ORTHO05D008078 1.8e-28 129.4 102 58.8
SalBow1G3286 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.1e-28 128.6 102 60.8
SalBow7G4342 Salvia bowleyana HOM05D006640 ORTHO05D008078 3.1e-28 128.6 102 60.8
MD08G1245100 Malus domestica HOM05D006640 ORTHO05D008078 4.0e-28 128.3 103 61.2
Cfa010319 Carpinus fangiana HOM05D006640 ORTHO05D008078 5.2e-28 127.9 102 56.9
Hund21079 Selenicereus undatus HOM05D006640 ORTHO05D008078 6.9e-28 127.5 145 48.3
SGA_v2.0_scaffold184G39969 Striga asiatica HOM05D006640 ORTHO05D008078 6.9e-28 127.5 145 47.6
SalBow6G0872 Salvia bowleyana HOM05D006640 ORTHO05D008078 8.9e-28 127.1 145 47.6
COL.COLO4_22727 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.0e-27 125.9 102 57.8
Prupe.5G009200 Prunus persica HOM05D006640 ORTHO05D008078 2.0e-27 125.9 103 61.2
TPR.G34155 Trifolium pratense HOM05D006640 ORTHO05D008078 2.0e-27 125.9 102 57.8
FvH4_5g25620 Fragaria vesca HOM05D006640 ORTHO05D008078 5.8e-27 124.4 103 57.3
FAN08G2005 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.8e-27 124.4 103 57.3
FAN18G3620 Fragaria x ananassa HOM05D006640 ORTHO05D008078 5.8e-27 124.4 103 57.3
Haze_19181 Corylus avellana HOM05D006640 ORTHO05D008078 7.6e-27 124.0 102 54.9
Psat7g226480 Pisum sativum HOM05D006640 ORTHO05D008078 9.9e-27 123.6 102 56.9
Gorai.006G062900 Gossypium raimondii HOM05D006640 ORTHO05D008078 1.7e-26 122.9 108 56.5
THA.LOC104820569 Tarenaya hassleriana HOM05D006640 ORTHO05D008078 1.7e-26 122.9 145 44.8
CANSAT54G1336 Cannabis sativa HOM05D006640 ORTHO05D008078 2.2e-26 122.5 102 55.9
FAN13G1910 Fragaria x ananassa HOM05D006640 ORTHO05D008078 2.2e-26 122.5 103 56.3
FAN04G1358 Fragaria x ananassa HOM05D006640 ORTHO05D008078 4.9e-26 121.3 103 55.3
RcHm_v2.0_Chr7g0215911 Rosa chinensis HOM05D006640 ORTHO05D008078 4.9e-26 121.3 103 58.3
Peaxi162Scf00680g00119 Petunia axillaris HOM05D006640 ORTHO05D008078 6.4e-26 120.9 102 61.8
Gohir.A09G046800 Gossypium hirsutum HOM05D006640 ORTHO05D008078 8.4e-26 120.6 108 55.6
HanXRQChr05g0147651 Helianthus annuus HOM05D006640 ORTHO05D008078 8.4e-26 120.6 145 46.9
Medtr1g103240 Medicago truncatula HOM05D006640 ORTHO05D008078 8.4e-26 120.6 102 55.9
HanXRQChr02g0057271 Helianthus annuus HOM05D006640 ORTHO05D008078 1.9e-25 119.4 145 45.5
Gohir.D09G047201 Gossypium hirsutum HOM05D006640 ORTHO05D008078 2.4e-25 119.0 92 62.0
Ah.13g071040 Amaranthus hybridus HOM05D006277 ORTHO05D008078 5.4e-25 117.9 145 44.8
Nn5g31001 Nelumbo nucifera HOM05D006640 ORTHO05D008078 7.1e-25 117.5 92 62.0
CSS0036253 Camellia sinensis var. sinensis HOM05D006640 ORTHO05D008078 9.3e-25 117.1 145 47.6
Aa31LG9G12490 Aethionema arabicum HOM05D006640 ORTHO05D008078 1.6e-24 116.3 145 38.6
BcaC06g34624 Brassica carinata HOM05D006640 ORTHO05D008078 1.6e-24 116.3 145 42.1
BcaC06g31675 Brassica carinata HOM05D006640 ORTHO05D008078 2.1e-24 115.9 145 42.1
unitig_46.g18025 Utricularia gibba HOM05D006640 ORTHO05D008078 2.1e-24 115.9 105 50.5
ECA232G3411 Erigeron canadensis HOM05D006640 ORTHO05D008078 2.7e-24 115.5 145 46.2
ATR0807G089 Amborella trichopoda HOM05D006640 ORTHO05D008078 3.5e-24 115.2 145 42.1
Glyma.08G337600 Glycine max HOM05D003402 ORTHO05D003939 6.0e-24 114.4 145 43.4
BraA06t27635Z Brassica rapa HOM05D006640 ORTHO05D008078 7.8e-24 114.0 145 41.4
Rhsim08G0078300 Rhododendron simsii HOM05D006640 ORTHO05D008078 7.8e-24 114.0 101 57.4
AUR62005948 Chenopodium quinoa HOM05D006640 ORTHO05D008078 1.0e-23 113.6 102 55.9
Ca_19713_v3 Cicer arietinum L. HOM05D006640 ORTHO05D008078 1.3e-23 113.2 184 38.0
Thhalv10003275m.g Eutrema salsugineum HOM05D006640 ORTHO05D008078 1.7e-23 112.8 145 42.1
MBI06_g19633_MAGBIO Magnolia biondii HOM05D006640 ORTHO05D008078 3.9e-23 111.7 123 44.7
VMungo0540G0999 Vigna mungo HOM05D006640 ORTHO05D008078 5.1e-23 111.3 102 51.0
Glyma.08G337400 Glycine max HOM05D001876 ORTHO05D002002 6.6e-23 110.9 145 42.8
PGR083G0938 Punica granatum HOM05D006640 ORTHO05D008078 1.5e-22 109.8 101 55.4
CDE02G0900 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 3.3e-22 108.6 106 50.9
Aqoxy6G01598 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 5.6e-22 107.8 145 39.3
AUR62028117 Chenopodium quinoa HOM05D006640 ORTHO05D008078 5.6e-22 107.8 102 53.9
CARHR179670 Cardamine hirsuta HOM05D006640 ORTHO05D008078 1.6e-21 106.3 145 40.7
COL.COLO4_07395 Corchorus olitorius HOM05D006640 ORTHO05D008078 2.1e-21 105.9 145 40.7
Lsat_1_v5_gn_0_27580 Lactuca sativa HOM05D006640 ORTHO05D008078 3.6e-21 105.1 146 40.4
Sp2g08620 Schrenkiella parvula HOM05D006218 ORTHO05D007338 3.6e-21 105.1 100 47.0
Sed0007887 Sechium edule HOM05D006640 ORTHO05D008078 3.6e-21 105.1 92 53.3
Os10g0566900 Oryza sativa ssp. japonica HOM05D006640 ORTHO05D008078 1.1e-20 103.6 101 51.5
Sabra05G0196400 Salix brachista HOM05D006640 ORTHO05D008078 2.4e-20 102.4 117 52.1
Phvul.008G111000 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 3.1e-20 102.1 102 47.1
SHI14582 Sapria himalayana HOM05D006640 ORTHO05D008078 9.0e-20 100.5 102 52.0
AL8G16350 Arabidopsis lyrata HOM05D006640 ORTHO05D008078 1.5e-19 99.8 145 36.6
Lsat_1_v5_gn_9_28760 Lactuca sativa HOM05D006640 ORTHO05D008078 2.0e-19 99.4 102 47.1
PSO675G3428 Papaver somniferum HOM05D006640 ORTHO05D008078 7.6e-19 97.4 146 39.7
PSO541G3394 Papaver somniferum HOM05D006640 ORTHO05D008078 9.9e-19 97.1 146 39.0
Phvul.006G070300 Phaseolus vulgaris HOM05D006640 ORTHO05D008078 9.9e-19 97.1 85 52.9
Carub.0008s0481 Capsella rubella HOM05D006640 ORTHO05D008078 2.2e-18 95.9 145 36.6
AT5G43822 Arabidopsis thaliana HOM05D006640 ORTHO05D008078 3.8e-18 95.1 145 34.5
Nitab4.5_0001208g0130 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-17 93.6 62 71.0
Nitab4.5_0000383g0410 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.4e-17 93.2 83 57.8
Atru.chr3.42 Acer truncatum HOM05D006640 ORTHO05D008078 1.9e-17 92.8 61 70.5
Peaxi162Scf00139g00094 Petunia axillaris HOM05D006640 ORTHO05D008078 3.2e-17 92.0 115 47.8
Mapoly0033s0101 Marchantia polymorpha HOM05D006640 ORTHO05D008078 1.6e-16 89.7 145 35.9
Sc24g0000300 Simmondsia chinensis HOM05D006640 ORTHO05D008078 1.0e-15 87.0 61 65.6
Aqoxy2G03352 Aquilegia oxysepala HOM05D006640 ORTHO05D008078 3.0e-15 85.5 128 38.3
HPP92_007449 Vanilla planifolia HOM05D006640 ORTHO05D008078 1.5e-14 83.2 101 42.6
Zm00001eb327920 Zea mays HOM05D006640 ORTHO05D008078 3.3e-14 82.0 102 41.2
Pp3c20_21140 Physcomitrium patens HOM05D000227 ORTHO05D008078 1.3e-13 80.1 101 42.6
AagrBONN_evm.TU.Sc2ySwM_362.2824 Anthoceros agrestis HOM05D006640 ORTHO05D008078 4.8e-13 78.2 102 39.2
Duzib205G1379 Durio zibethinus HOM05D006640 ORTHO05D008078 4.8e-13 78.2 85 50.6
RcHm_v2.0_Chr3g0481381 Rosa chinensis HOM05D006640 ORTHO05D008078 8.1e-13 77.4 49 69.4
Nitab4.5_0010095g0020 Nicotiana tabacum HOM05D006640 ORTHO05D008078 1.1e-12 77.0 47 74.5
CBR_g30123 Chara braunii HOM05D006640 ORTHO05D008078 3.8e-10 68.6 101 33.7
Actinidia35855 Actinidia chinensis HOM05D002342 ORTHO05D002407 1.1e-09 67.0 84 47.6
FvH4_6g22960 Fragaria vesca HOM05D006640 ORTHO05D008078 4.2e-09 65.1 77 45.5
CDE04G0756 Ceratophyllum demersum HOM05D006640 ORTHO05D008078 5.5e-09 64.7 66 47.0


User provided reference genes

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