Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C780T7 Lonicera japonica HOM05D002445 ORTHO05D002690 2.0e-10 67.8 37 100.0
Lj5C40T23 Lonicera japonica HOM05D002445 ORTHO05D002690 2.5e-08 60.8 36 91.7
MSTRG.9508 Avicennia marina HOM05D002445 ORTHO05D002690 3.2e-08 60.5 36 88.9
HanXRQChr12g0360471 Helianthus annuus HOM05D002445 ORTHO05D002690 3.2e-08 60.5 36 88.9
MSTRG.4781 Avicennia marina HOM05D002445 ORTHO05D002690 4.2e-08 60.1 36 86.1
Actinidia21779 Actinidia chinensis HOM05D004436 ORTHO05D005179 7.2e-08 59.3 36 86.1
Dinv37890 Davidia involucrata HOM05D002445 ORTHO05D002690 7.2e-08 59.3 36 86.1
CSS0001958 Camellia sinensis var. sinensis HOM05D002445 ORTHO05D002690 9.4e-08 58.9 36 83.3
Rhsim12G0208200 Rhododendron simsii HOM05D002445 ORTHO05D002690 1.6e-07 58.2 36 83.3
SGA_v2.0_scaffold122G33356 Striga asiatica HOM05D002445 ORTHO05D002690 1.6e-07 58.2 36 86.1
SGA_v2.0_scaffold71G23811 Striga asiatica HOM05D002445 ORTHO05D002690 1.6e-07 58.2 36 86.1
Actinidia26041 Actinidia chinensis HOM05D002445 ORTHO05D002690 2.1e-07 57.8 36 83.3
Actinidia39093 Actinidia chinensis HOM05D002445 ORTHO05D002690 2.1e-07 57.8 36 83.3
Lsat_1_v5_gn_4_94780 Lactuca sativa HOM05D002445 ORTHO05D002690 2.1e-07 57.8 36 83.3
Hma1.2p1_0291F.1_g115430 Hydrangea macrophylla HOM05D002445 ORTHO05D002690 3.6e-07 57.0 36 83.3
Oeu002491.1 Olea europaea HOM05D002445 ORTHO05D002690 4.7e-07 56.6 36 80.6
Oeu027300.1 Olea europaea HOM05D002445 ORTHO05D002690 4.7e-07 56.6 36 80.6
unitig_899.g14768 Utricularia gibba HOM05D002445 ORTHO05D002690 7.9e-07 55.8 36 77.8
Cc04_g01650 Coffea canephora HOM05D002445 ORTHO05D002690 1.0e-06 55.5 36 77.8
Migut.I01050 Erythranthe guttata HOM05D002445 ORTHO05D002690 1.0e-06 55.5 36 80.6
Psat6g146840 Pisum sativum HOM05D002445 ORTHO05D002690 1.0e-06 55.5 36 77.8
Sc12g0010400 Simmondsia chinensis HOM05D002445 ORTHO05D002690 1.0e-06 55.5 36 77.8
Nn1g05831 Nelumbo nucifera HOM05D002445 ORTHO05D002690 1.4e-06 55.1 36 77.8
Ca_10052_v3 Cicer arietinum L. HOM05D002445 ORTHO05D002690 1.8e-06 54.7 36 77.8
Ca_30670_v3 Cicer arietinum L. HOM05D002445 ORTHO05D002690 1.8e-06 54.7 36 77.8
Peaxi162Scf00038g00179 Petunia axillaris HOM05D002445 ORTHO05D002690 2.3e-06 54.3 36 77.8
GSVIVG01016813001 Vitis vinifera HOM05D002445 ORTHO05D002690 2.3e-06 54.3 36 80.6
CDE11G0031 Ceratophyllum demersum HOM05D002445 ORTHO05D002690 3.0e-06 53.9 36 72.2
Hma1.2p1_0496F.1_g166070 Hydrangea macrophylla HOM05D002445 ORTHO05D002690 3.0e-06 53.9 36 80.6
TAR629G0789 Trochodendron aralioides HOM05D002445 ORTHO05D002690 3.0e-06 53.9 36 75.0
CAN.G862.16 Capsicum annuum HOM05D002445 ORTHO05D002690 3.9e-06 53.5 36 77.8
SGA_v2.0_scaffold68G22896 Striga asiatica HOM05D002445 ORTHO05D002690 3.9e-06 53.5 36 77.8
Nitab4.5_0000189g0280 Nicotiana tabacum HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
Nitab4.5_0005003g0010 Nicotiana tabacum HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
Nitab4.5_0009641g0010 Nicotiana tabacum HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
Solyc12g049220.3 Solanum lycopersicum HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
Sopen12g023670 Solanum pennellii HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
PGSC0003DMG400043220 Solanum tuberosum HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 75.0
unitig_736.g22786 Utricularia gibba HOM05D002445 ORTHO05D002690 5.1e-06 53.1 36 77.8
Migut.D00951 Erythranthe guttata HOM05D002445 ORTHO05D002690 6.7e-06 52.8 36 77.8
Lsat_1_v5_gn_5_135581 Lactuca sativa HOM05D002445 ORTHO05D002690 6.7e-06 52.8 36 77.8


User provided reference genes

Program Settings