Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C77T3 Lonicera japonica HOM05D008183 ORTHO05D007254 1.8e-99 365.9 189 100.0
Lju110C5T8 Lonicera japonica HOM05D008183 ORTHO05D007254 7.1e-43 177.9 142 68.3
Lj1P289T15 Lonicera japonica HOM05D008183 ORTHO05D007254 5.1e-41 171.8 129 72.1
Lj2C65T12 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-39 166.4 137 65.7
Lj3P854T34 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-32 143.7 112 70.5
Lj1P1217T36 Lonicera japonica HOM05D008183 ORTHO05D007254 9.3e-19 97.8 123 40.7
Lj3P1014T21 Lonicera japonica HOM05D008183 ORTHO05D007254 4.6e-18 95.5 134 39.6
Lj5P293T5 Lonicera japonica HOM05D008183 ORTHO05D007254 1.9e-16 90.1 95 52.6
Lj2C40G9 Lonicera japonica HOM05D008183 ORTHO05D007254 9.6e-16 87.8 127 39.4
Lj8P205T42 Lonicera japonica HOM05D008183 ORTHO05D007254 1.6e-15 87.0 99 46.5
Lj7P396T52 Lonicera japonica HOM05D008183 ORTHO05D007254 8.2e-15 84.7 95 46.3
Lj1P1006T30 Lonicera japonica HOM05D008183 ORTHO05D007254 6.9e-14 81.6 119 44.5
Lj1P880T38 Lonicera japonica HOM05D008183 ORTHO05D007254 9.0e-14 81.3 95 45.3
Lj9P645T45 Lonicera japonica HOM05D008183 ORTHO05D007254 1.2e-13 80.9 97 48.5
CSS0013917 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 5.8e-13 78.6 127 36.2
Lj2P257T35 Lonicera japonica HOM05D008183 ORTHO05D007254 5.8e-13 78.6 90 44.4
CSS0007562 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.9e-12 76.3 122 36.1
CSS0012014 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.8e-12 75.9 127 35.4
CSS0008839 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.9e-11 73.6 133 42.1
Rhsim01G0167200 Rhododendron simsii HOM05D000003 ORTHO05D007254 3.2e-11 72.8 153 35.3
Rhsim03G0134300 Rhododendron simsii HOM05D008183 ORTHO05D007254 4.2e-11 72.4 118 35.6
Rhsim07G0138700 Rhododendron simsii HOM05D000003 ORTHO05D000004 9.3e-11 71.2 110 36.4
Lj9P695T39 Lonicera japonica HOM05D008183 ORTHO05D007254 2.1e-10 70.1 89 44.9
Rhsim01G0165600 Rhododendron simsii HOM05D000003 ORTHO05D007254 2.1e-10 70.1 152 35.5
vmacro20413 Vaccinium macrocarpon HOM05D000009 ORTHO05D000008 4.6e-10 68.9 110 37.3
Rhsim06G0103400 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-09 67.0 118 37.3
Rhsim11G0009800 Rhododendron simsii HOM05D000003 ORTHO05D000004 1.8e-09 67.0 118 37.3
Rhsim13G0004500 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.8e-09 67.0 118 37.3
vmacro23070 Vaccinium macrocarpon HOM05D000626 ORTHO05D007254 1.8e-09 67.0 123 35.0
CSS0039886 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 2.3e-09 66.6 128 32.8
CSS0024246 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 3.0e-09 66.2 126 37.3
Rhsim01G0155500 Rhododendron simsii HOM05D000003 ORTHO05D007254 6.7e-09 65.1 118 37.3
Lj3P938T21 Lonicera japonica HOM05D008183 ORTHO05D007254 1.5e-08 63.9 75 45.3
Rhsim01G0063000 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.5e-08 63.9 118 34.7
Rhsim12G0010300 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.5e-08 63.9 118 35.6
CSS0000077 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.9e-08 63.5 127 33.1
Rhsim03G0084200 Rhododendron simsii HOM05D008183 ORTHO05D007254 1.9e-08 63.5 118 37.3
CSS0013490 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 7.4e-08 61.6 128 33.6
RhsimUnG0047500 Rhododendron simsii HOM05D008183 ORTHO05D007254 7.4e-08 61.6 133 32.3
Lj3P354T13 Lonicera japonica HOM05D008183 ORTHO05D007254 9.7e-08 61.2 83 37.3
Rhsim02G0203700 Rhododendron simsii HOM05D000001 ORTHO05D009494 1.3e-07 60.8 105 37.1
Rhsim08G0082000 Rhododendron simsii HOM05D000003 ORTHO05D000006 1.6e-07 60.5 120 33.3
Rhsim03G0019700 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.8e-07 59.7 120 34.2
Rhsim03G0019800 Rhododendron simsii HOM05D008183 ORTHO05D007254 2.8e-07 59.7 120 34.2
Rhsim04G0100600 Rhododendron simsii HOM05D000003 ORTHO05D000004 2.8e-07 59.7 103 35.9
vmacro21152 Vaccinium macrocarpon HOM05D003664 ORTHO05D003077 3.7e-07 59.3 126 31.0
CSS0037115 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 6.3e-07 58.5 144 33.3
Eucgr.B00966 Eucalyptus grandis HOM05D008183 ORTHO05D007254 6.3e-07 58.5 145 30.3
Sc20g0000530 Simmondsia chinensis HOM05D013236 ORTHO05D007254 1.1e-06 57.8 112 35.7
CSS0043494 Camellia sinensis var. sinensis HOM05D008183 ORTHO05D007254 1.4e-06 57.4 170 32.4
CSS0027596 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 1.8e-06 57.0 93 39.8
vmacro01918 Vaccinium macrocarpon HOM05D008183 ORTHO05D007254 2.4e-06 56.6 109 36.7
CSS0036610 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D007254 3.1e-06 56.2 89 39.3
arahy.Tifrunner.gnm1.ann1.0Y1AJC Arachis hypogaea HOM05D027442 ORTHO05D000167 5.3e-06 55.5 154 31.2
arahy.Tifrunner.gnm1.ann1.MHV6FT Arachis hypogaea HOM05D027442 ORTHO05D007254 5.3e-06 55.5 144 32.6
CSS0001686 Camellia sinensis var. sinensis HOM05D000003 ORTHO05D000004 6.9e-06 55.1 84 47.6
FvH4_5g21911 Fragaria vesca HOM05D000003 ORTHO05D000022 6.9e-06 55.1 129 30.2
RcHm_v2.0_Chr7g0223051 Rosa chinensis HOM05D000003 ORTHO05D009449 6.9e-06 55.1 144 31.2
Lj8P115T49 Lonicera japonica HOM05D008183 ORTHO05D007254 9.0e-06 54.7 58 43.1
Rhsim03G0017000 Rhododendron simsii HOM05D008183 ORTHO05D007254 9.0e-06 54.7 86 41.9


User provided reference genes

Program Settings