Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C716T9 Lonicera japonica HOM05D008167 ORTHO05D010296 1.2e-228 796.2 397 100.0
Lj4C719T5 Lonicera japonica HOM05D008167 ORTHO05D010296 5.0e-224 780.8 398 98.5
Dinv13035 Davidia involucrata HOM05D008167 ORTHO05D010296 2.5e-151 539.3 398 68.1
Actinidia10306 Actinidia chinensis HOM05D008167 ORTHO05D010296 4.3e-151 538.5 386 69.4
QL12p036142 Quercus lobata HOM05D008167 ORTHO05D010296 4.3e-143 511.9 385 65.2
CiPaw.05G235800 Carya illinoinensis HOM05D008167 ORTHO05D010296 2.2e-139 499.6 393 62.6
TAR628G0982 Trochodendron aralioides HOM05D008167 ORTHO05D010296 3.6e-137 492.3 393 62.1
Cfa015915 Carpinus fangiana HOM05D008167 ORTHO05D010296 1.8e-136 490.0 390 62.1
Manes.02G154800 Manihot esculenta HOM05D008167 ORTHO05D010296 4.7e-129 465.3 390 60.5
Prupe.1G513100 Prunus persica HOM05D008167 ORTHO05D010296 3.7e-126 455.7 394 58.9
Nn1g05299 Nelumbo nucifera HOM05D008167 ORTHO05D010296 4.8e-126 455.3 391 57.8
Thecc.08G110600 Theobroma cacao HOM05D008167 ORTHO05D010296 5.3e-125 451.8 397 56.4
Gorai.002G219300 Gossypium raimondii HOM05D008167 ORTHO05D010296 3.5e-124 449.1 390 57.4
PSO133G0102 Papaver somniferum HOM05D008167 ORTHO05D010296 1.7e-123 446.8 390 57.9
COL.COLO4_16444 Corchorus olitorius HOM05D008167 ORTHO05D010296 6.5e-123 444.9 392 56.4
TWI56G0729 Tripterygium wilfordii HOM05D008167 ORTHO05D010296 8.5e-123 444.5 394 57.6
PSO541G2703 Papaver somniferum HOM05D008167 ORTHO05D010296 1.5e-122 443.7 391 58.1
Aqoxy6G00583 Aquilegia oxysepala HOM05D008167 ORTHO05D010296 2.5e-122 443.0 400 59.0
RcHm_v2.0_Chr7g0239831 Rosa chinensis HOM05D008167 ORTHO05D010296 1.0e-120 437.6 397 56.4
FvH4_5g37850 Fragaria vesca HOM05D008167 ORTHO05D010296 8.8e-120 434.5 389 57.3
Duzib093G0044 Durio zibethinus HOM05D008167 ORTHO05D010296 1.2e-119 434.1 369 58.8
Ciclev10001481m.g Citrus clementina HOM05D008167 ORTHO05D010296 1.5e-119 433.7 382 57.6
Gohir.D01G176900 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.5e-119 433.7 360 59.4
Potri.002G093800 Populus trichocarpa HOM05D008167 ORTHO05D010296 5.7e-119 431.8 390 56.7
Cpa.g.sc66.82 Carica papaya HOM05D008167 ORTHO05D010296 2.2e-118 429.9 356 59.0
MBI02_g36661_MAGBIO Magnolia biondii HOM05D008167 ORTHO05D010296 2.8e-118 429.5 386 56.5
FAN08G3120 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.7e-118 429.1 389 56.3
FAN13G0369 Fragaria x ananassa HOM05D008167 ORTHO05D010296 3.1e-117 426.0 390 56.9
FAN04G1438 Fragaria x ananassa HOM05D008167 ORTHO05D010296 2.9e-115 419.5 390 56.4
Gohir.A01G186400 Gossypium hirsutum HOM05D008167 ORTHO05D010296 1.5e-114 417.2 375 56.5
arahy.Tifrunner.gnm1.ann1.R32LA5 Arachis hypogaea HOM05D008167 ORTHO05D010296 3.6e-113 412.5 373 55.5
Lj3g0012000 Lotus japonicus HOM05D008167 ORTHO05D010296 1.2e-111 407.5 352 57.7
Lalb_Chr01g0013571 Lupinus albus HOM05D008167 ORTHO05D010296 1.5e-111 407.1 378 54.0
FAN18G0166 Fragaria x ananassa HOM05D008167 ORTHO05D010296 1.2e-108 397.5 348 58.6
HanXRQChr04g0111501 Helianthus annuus HOM05D008167 ORTHO05D010296 3.5e-108 396.0 392 52.6
Medtr8g020400 Medicago truncatula HOM05D008167 ORTHO05D010296 5.0e-107 392.1 350 57.4
Lsat_1_v5_gn_0_9700 Lactuca sativa HOM05D008167 ORTHO05D010296 8.6e-107 391.3 388 55.2
GSVIVG01009002001 Vitis vinifera HOM05D008167 ORTHO05D010296 9.5e-106 387.9 279 67.0
AUR62027724 Chenopodium quinoa HOM05D008167 ORTHO05D010296 2.1e-105 386.7 380 52.1
arahy.Tifrunner.gnm1.ann1.DD9M5F Arachis hypogaea HOM05D008167 ORTHO05D010296 2.8e-105 386.3 436 47.9
CANSAT25G1054 Cannabis sativa HOM05D008167 ORTHO05D010296 2.8e-105 386.3 356 55.6
DCAR_008714 Daucus carota HOM05D008167 ORTHO05D010296 3.6e-105 386.0 310 62.3
Atru.chr13.1254 Acer truncatum HOM05D008167 ORTHO05D010296 3.0e-104 382.9 303 61.7
EL10Ac1g01257 Beta vulgaris HOM05D008167 ORTHO05D010296 5.4e-101 372.1 386 48.7
VMungo0331G0414 Vigna mungo HOM05D008167 ORTHO05D010296 1.6e-97 360.5 391 52.2
Sabra02G0073900 Salix brachista HOM05D008167 ORTHO05D010296 1.4e-96 357.5 380 52.1
MD15G1365100 Malus domestica HOM05D008167 ORTHO05D010296 2.3e-96 356.7 306 59.2
vmacro21234 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 1.7e-94 350.5 298 61.4
ECA232G3852 Erigeron canadensis HOM05D008167 ORTHO05D010296 3.5e-92 342.8 270 63.3
Os06g0222800 Oryza sativa ssp. japonica HOM05D008167 ORTHO05D010296 2.1e-81 307.0 383 44.6
TPR.G32489 Trifolium pratense HOM05D008167 ORTHO05D010296 2.1e-81 307.0 314 51.3
Ca_23370_v3 Cicer arietinum L. HOM05D008167 ORTHO05D010296 4.9e-78 295.8 269 54.6
Psat4g183040 Pisum sativum HOM05D008167 ORTHO05D010296 1.1e-74 284.6 270 54.8
Eucgr.F02444 Eucalyptus grandis HOM05D008167 ORTHO05D010296 8.1e-73 278.5 264 54.5
ATR0564G341 Amborella trichopoda HOM05D008167 ORTHO05D010296 3.4e-63 246.5 239 51.5
Haze_17026 Corylus avellana HOM05D000028 ORTHO05D010296 4.9e-46 189.5 169 56.2
Pp3c20_15640 Physcomitrium patens HOM05D008167 ORTHO05D010296 4.9e-46 189.5 392 33.2
Glyma.16G006900 Glycine max HOM05D008167 ORTHO05D010296 6.5e-46 189.1 279 40.9
SEGI_30626 Sequoiadendron giganteum HOM05D008167 ORTHO05D010296 4.6e-44 183.0 255 40.4
vmacro21235 Vaccinium macrocarpon HOM05D008167 ORTHO05D010296 3.7e-41 173.3 122 71.3
Haze_24435 Corylus avellana HOM05D006271 ORTHO05D008237 1.5e-39 167.9 111 72.1
Haze_00155 Corylus avellana HOM05D008167 ORTHO05D010296 4.5e-39 166.4 112 69.6
Haze_15967 Corylus avellana HOM05D008167 ORTHO05D010296 1.6e-33 147.9 127 57.5
Haze_08650 Corylus avellana HOM05D008167 ORTHO05D010296 3.1e-24 117.1 82 64.6
Glyma.07G037500 Glycine max HOM05D008167 ORTHO05D010296 2.2e-14 84.3 107 46.7
MD15G1365000 Malus domestica HOM05D008167 ORTHO05D010296 5.0e-14 83.2 81 56.8
HPP92_002242 Vanilla planifolia HOM05D006671 ORTHO05D008637 1.7e-09 68.2 338 23.1
Sabra01G0131200 Salix brachista HOM05D006671 ORTHO05D008637 8.2e-09 65.9 366 23.0
CiPaw.03G010100 Carya illinoinensis HOM05D006671 ORTHO05D008637 1.8e-08 64.7 395 22.3
Medtr8g020410 Medicago truncatula HOM05D008167 ORTHO05D010296 2.4e-08 64.3 49 55.1
arahy.Tifrunner.gnm1.ann1.YS0GDU Arachis hypogaea HOM05D006671 ORTHO05D008637 3.1e-08 63.9 386 22.8
arahy.Tifrunner.gnm1.ann1.NMV212 Arachis hypogaea HOM05D006671 ORTHO05D008637 2.0e-07 61.2 386 22.8
Glyma.07G047100 Glycine max HOM05D006671 ORTHO05D008637 7.7e-07 59.3 336 21.7
Lj3g0013980 Lotus japonicus HOM05D006671 ORTHO05D008637 7.7e-07 59.3 342 21.9
Potri.001G161100 Populus trichocarpa HOM05D006671 ORTHO05D008637 2.9e-06 57.4 408 22.1
Phvul.010G121800 Phaseolus vulgaris HOM05D006671 ORTHO05D008637 5.0e-06 56.6 341 21.7
Dinv20369 Davidia involucrata HOM05D006671 ORTHO05D008637 6.5e-06 56.2 367 21.5
Glyma.16G015100 Glycine max HOM05D006671 ORTHO05D008637 6.5e-06 56.2 406 21.9
Sc12g0010960 Simmondsia chinensis HOM05D006671 ORTHO05D008637 6.5e-06 56.2 372 22.0


User provided reference genes

Program Settings