Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C710G5 Lonicera japonica HOM05D003420 ORTHO05D003970 5.2e-229 797.3 400 100.0
Cfa018227 Carpinus fangiana HOM05D003420 ORTHO05D003970 3.4e-204 714.9 422 85.5
PGR102G1634 Punica granatum HOM05D003420 ORTHO05D003970 5.8e-204 714.1 422 85.5
MELO3C019945.2 Cucumis melo HOM05D003420 ORTHO05D003970 1.7e-203 712.6 422 85.8
SGA_v2.0_scaffold48G18027 Striga asiatica HOM05D003420 ORTHO05D003970 2.9e-203 711.8 422 83.6
BolC6t39641H Brassica oleracea HOM05D003420 ORTHO05D003970 3.8e-203 711.4 400 87.8
Actinidia22448 Actinidia chinensis HOM05D003420 ORTHO05D003970 4.9e-203 711.1 422 84.4
CiPaw.15G007400 Carya illinoinensis HOM05D003420 ORTHO05D003970 1.4e-202 709.5 422 84.8
Thecc.01G140700 Theobroma cacao HOM05D003420 ORTHO05D003970 2.4e-202 708.8 422 84.6
ClCG08G008720 Citrullus lanatus HOM05D003420 ORTHO05D003970 7.1e-202 707.2 422 85.3
Prupe.4G277400 Prunus persica HOM05D003420 ORTHO05D003970 7.1e-202 707.2 422 83.9
CsaV3_6G004750 Cucumis sativus L. HOM05D003420 ORTHO05D003970 9.3e-202 706.8 422 85.3
Glyma.03G026900 Glycine max HOM05D003420 ORTHO05D003970 9.3e-202 706.8 422 83.9
Lj4g0005231 Lotus japonicus HOM05D003420 ORTHO05D003970 9.3e-202 706.8 422 83.9
BraA07t31362Z Brassica rapa HOM05D003420 ORTHO05D003970 1.6e-201 706.1 403 87.1
Cc10_g06190 Coffea canephora HOM05D003420 ORTHO05D003970 1.6e-201 706.1 422 82.9
Hma1.2p1_0276F.1_g111220 Hydrangea macrophylla HOM05D003420 ORTHO05D003970 2.1e-201 705.7 422 84.1
GSVIVG01038535001 Vitis vinifera HOM05D003420 ORTHO05D003970 2.1e-201 705.7 422 84.4
Medtr4g024570 Medicago truncatula HOM05D003420 ORTHO05D003970 2.7e-201 705.3 422 83.9
MSTRG.963 Avicennia marina HOM05D003420 ORTHO05D003970 4.6e-201 704.5 418 83.0
CSS0045751 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 7.9e-201 703.7 422 83.4
Glyma.01G140600 Glycine max HOM05D003420 ORTHO05D003970 7.9e-201 703.7 422 83.6
Oeu027630.1 Olea europaea HOM05D003420 ORTHO05D003970 7.9e-201 703.7 434 81.3
GSVIVG01022846001 Vitis vinifera HOM05D003420 ORTHO05D003970 1.3e-200 703.0 422 83.9
Carub.0002s1858 Capsella rubella HOM05D003420 ORTHO05D003970 1.7e-200 702.6 422 83.2
Migut.C00172 Erythranthe guttata HOM05D003420 ORTHO05D003970 1.7e-200 702.6 422 83.2
Lalb_Chr01g0009891 Lupinus albus HOM05D003420 ORTHO05D003970 1.7e-200 702.6 422 84.1
TWI32G0430 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 1.7e-200 702.6 422 83.9
Thhalv10018180m.g Eutrema salsugineum HOM05D003420 ORTHO05D003970 2.3e-200 702.2 422 83.2
Potri.019G088100 Populus trichocarpa HOM05D003420 ORTHO05D003970 3.0e-200 701.8 422 83.2
QL05p046655 Quercus lobata HOM05D003420 ORTHO05D003970 3.0e-200 701.8 420 83.8
CANSAT25G1859 Cannabis sativa HOM05D003420 ORTHO05D003970 3.9e-200 701.4 422 83.4
Manes.18G097100 Manihot esculenta HOM05D003420 ORTHO05D003970 3.9e-200 701.4 422 83.4
RcHm_v2.0_Chr3g0482841 Rosa chinensis HOM05D003420 ORTHO05D003970 3.9e-200 701.4 422 83.2
Sp5g26850 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.9e-200 701.4 422 82.9
SpUn0020_0120 Schrenkiella parvula HOM05D003420 ORTHO05D003970 3.9e-200 701.4 422 82.9
AL2G31400 Arabidopsis lyrata HOM05D003420 ORTHO05D003970 8.7e-200 700.3 422 82.9
Psat7g231160 Pisum sativum HOM05D003420 ORTHO05D003970 8.7e-200 700.3 422 82.9
Potri.013G117400 Populus trichocarpa HOM05D003420 ORTHO05D003970 8.7e-200 700.3 422 82.9
Lalb_Chr19g0129871 Lupinus albus HOM05D003420 ORTHO05D003970 1.1e-199 699.9 418 83.7
THA.LOC104800101 Tarenaya hassleriana HOM05D003420 ORTHO05D003970 1.5e-199 699.5 422 82.7
Phvul.010G082700 Phaseolus vulgaris HOM05D003420 ORTHO05D003970 1.9e-199 699.1 422 83.2
Sc02g0003530 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.9e-199 699.1 422 82.5
BcaC08g46613 Brassica carinata HOM05D003420 ORTHO05D003970 2.5e-199 698.7 422 83.2
CARHR290940 Cardamine hirsuta HOM05D003420 ORTHO05D003970 2.5e-199 698.7 422 82.7
AT1G71820 Arabidopsis thaliana HOM05D003420 ORTHO05D003970 3.3e-199 698.4 422 82.7
FvH4_6g24280 Fragaria vesca HOM05D003420 ORTHO05D003970 3.3e-199 698.4 422 82.9
FAN14G5243 Fragaria x ananassa HOM05D003420 ORTHO05D003970 3.3e-199 698.4 422 82.9
Aqoxy2G01386 Aquilegia oxysepala HOM05D003420 ORTHO05D003970 4.3e-199 698.0 422 83.2
Duzib187G1187 Durio zibethinus HOM05D003420 ORTHO05D003970 4.3e-199 698.0 422 83.4
Peaxi162Scf00226g00925 Petunia axillaris HOM05D003420 ORTHO05D003970 4.3e-199 698.0 422 82.0
TAR625G1262 Trochodendron aralioides HOM05D003420 ORTHO05D003970 4.3e-199 698.0 422 83.6
BraA07t30693Z Brassica rapa HOM05D003420 ORTHO05D003970 7.3e-199 697.2 399 86.2
CSS0008854 Camellia sinensis var. sinensis HOM05D003420 ORTHO05D003970 1.3e-198 696.4 422 81.8
Sed0005269 Sechium edule HOM05D003420 ORTHO05D003970 1.6e-198 696.0 422 83.9
Atru.chr13.1894 Acer truncatum HOM05D003420 ORTHO05D003970 2.8e-198 695.3 422 82.2
Hund17515 Selenicereus undatus HOM05D003420 ORTHO05D003970 6.2e-198 694.1 408 84.6
MD14G1071700 Malus domestica HOM05D003420 ORTHO05D003970 1.1e-197 693.3 422 82.5
Sopen04g028480 Solanum pennellii HOM05D003420 ORTHO05D003970 1.1e-197 693.3 422 81.8
Nitab4.5_0001307g0060 Nicotiana tabacum HOM05D003420 ORTHO05D003970 1.4e-197 693.0 439 79.7
A07p37970 Brassica napus HOM05D003420 ORTHO05D003970 2.4e-197 692.2 439 80.0
C06p45890 Brassica napus HOM05D003420 ORTHO05D003970 2.4e-197 692.2 439 80.0
Nitab4.5_0002608g0090 Nicotiana tabacum HOM05D003420 ORTHO05D003970 3.1e-197 691.8 437 79.9
Aa31LG4G8810 Aethionema arabicum HOM05D003420 ORTHO05D003970 4.0e-197 691.4 427 81.7
CAN.G1010.15 Capsicum annuum HOM05D003420 ORTHO05D003970 6.9e-197 690.6 422 81.3
CiPaw.15G007500 Carya illinoinensis HOM05D003420 ORTHO05D003970 6.9e-197 690.6 422 83.4
Gohir.D10G107600 Gossypium hirsutum HOM05D003420 ORTHO05D003970 9.0e-197 690.3 422 82.7
BcaC08g45755 Brassica carinata HOM05D003420 ORTHO05D003970 1.2e-196 689.9 418 82.3
A07p30580 Brassica napus HOM05D003420 ORTHO05D003970 1.2e-196 689.9 418 82.3
Gohir.A10G068000 Gossypium hirsutum HOM05D003420 ORTHO05D003970 1.2e-196 689.9 422 82.7
Gorai.011G117900 Gossypium raimondii HOM05D003420 ORTHO05D003970 1.2e-196 689.9 422 82.7
TPR.G31331 Trifolium pratense HOM05D003420 ORTHO05D003970 2.0e-196 689.1 460 76.7
Solyc04g072290.3 Solanum lycopersicum HOM05D003420 ORTHO05D003970 2.6e-196 688.7 422 81.3
PSO210G4421 Papaver somniferum HOM05D003420 ORTHO05D003970 3.4e-196 688.3 422 82.7
PSO447G0346 Papaver somniferum HOM05D003420 ORTHO05D003970 3.4e-196 688.3 422 82.9
Lsat_1_v5_gn_6_100921 Lactuca sativa HOM05D003420 ORTHO05D003970 4.5e-196 688.0 412 83.0
ECA246G4467 Erigeron canadensis HOM05D003420 ORTHO05D003970 5.8e-196 687.6 421 81.2
MBI02_g44124_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 9.9e-196 686.8 422 80.8
EL10Ac8g19742 Beta vulgaris HOM05D003420 ORTHO05D003970 1.7e-195 686.0 410 84.4
MBI05_g43692_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.4e-194 682.2 400 83.0
HanXRQChr10g0278771 Helianthus annuus HOM05D003420 ORTHO05D003970 4.2e-194 681.4 412 82.5
C06p35360 Brassica napus HOM05D003420 ORTHO05D003970 9.3e-194 680.2 443 77.7
BolC6t38641H Brassica oleracea HOM05D003420 ORTHO05D003970 9.3e-194 680.2 443 77.7
Manes.02G187400 Manihot esculenta HOM05D003420 ORTHO05D003970 7.9e-193 677.2 422 80.1
Actinidia15626 Actinidia chinensis HOM05D003420 ORTHO05D003970 1.3e-192 676.4 420 80.7
DCAR_013169 Daucus carota HOM05D003420 ORTHO05D003970 1.3e-192 676.4 459 75.2
arahy.Tifrunner.gnm1.ann1.GQ31QR Arachis hypogaea HOM05D003420 ORTHO05D003970 2.3e-192 675.6 406 83.0
arahy.Tifrunner.gnm1.ann1.PV9APJ Arachis hypogaea HOM05D003420 ORTHO05D003970 2.3e-192 675.6 406 83.0
Atru.chr13.1960 Acer truncatum HOM05D003420 ORTHO05D003970 4.3e-191 671.4 417 80.3
MBI05_g36581_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.8e-189 666.0 400 81.5
Zm00001eb254950 Zea mays HOM05D003420 ORTHO05D003970 7.6e-188 660.6 420 78.3
MBI05_g36592_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 1.3e-187 659.8 400 81.2
Sabra13G0099500 Salix brachista HOM05D003420 ORTHO05D003970 1.3e-187 659.8 470 73.0
ATR0815G027 Amborella trichopoda HOM05D003420 ORTHO05D003970 2.9e-187 658.7 420 78.3
Sabra19G0098400 Salix brachista HOM05D003420 ORTHO05D003970 3.8e-187 658.3 495 69.7
Sabra19G0101900 Salix brachista HOM05D003420 ORTHO05D003970 3.8e-187 658.3 495 69.7
Atru.chr6.1390 Acer truncatum HOM05D003420 ORTHO05D003970 4.2e-186 654.8 416 78.1
Ah.09g232700 Amaranthus hybridus HOM05D003420 ORTHO05D003970 5.5e-186 654.4 436 77.1
Ciclev10000376m.g Citrus clementina HOM05D003420 ORTHO05D003970 6.7e-184 647.5 424 74.8
vmacro11081 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 5.7e-183 644.4 435 76.3
FAN02G2135 Fragaria x ananassa HOM05D003420 ORTHO05D003970 9.6e-183 643.7 401 81.5
Eucgr.F04156 Eucalyptus grandis HOM05D003420 ORTHO05D003970 1.6e-182 642.9 422 78.7
Migut.C00145 Erythranthe guttata HOM05D003420 ORTHO05D003970 7.6e-180 634.0 422 74.6
Atru.chr7.57 Acer truncatum HOM05D003420 ORTHO05D003970 1.0e-179 633.6 417 76.3
HanXRQChr10g0278751 Helianthus annuus HOM05D003420 ORTHO05D003970 5.7e-175 617.8 421 73.4
FAN05G2825 Fragaria x ananassa HOM05D003420 ORTHO05D003970 4.8e-174 614.8 422 75.1
DCAR_009600 Daucus carota HOM05D003420 ORTHO05D003970 5.3e-173 611.3 359 83.3
BcaB03g15619 Brassica carinata HOM05D003420 ORTHO05D003970 7.2e-170 600.9 368 82.1
Rhsim05G0166700 Rhododendron simsii HOM05D003420 ORTHO05D003970 2.1e-169 599.4 442 71.5
Cpa.g.sc66.125 Carica papaya HOM05D003420 ORTHO05D003970 3.0e-168 595.5 393 78.6
Haze_17875 Corylus avellana HOM05D003420 ORTHO05D003970 2.4e-165 585.9 514 64.4
AUR62030227 Chenopodium quinoa HOM05D003420 ORTHO05D003970 5.9e-164 581.3 465 68.0
Mapoly0001s0359 Marchantia polymorpha HOM05D003420 ORTHO05D003970 1.0e-163 580.5 409 68.2
Psat4g195800 Pisum sativum HOM05D003420 ORTHO05D003970 7.9e-161 570.9 409 70.4
Migut.C00173 Erythranthe guttata HOM05D003420 ORTHO05D003970 2.8e-158 562.4 381 73.5
SMO298G0019 Selaginella moellendorffii HOM05D003420 ORTHO05D003970 2.8e-158 562.4 409 67.2
HanXRQChr01g0002061 Helianthus annuus HOM05D003420 ORTHO05D003970 8.2e-158 560.8 429 70.4
Nn8g40471 Nelumbo nucifera HOM05D003420 ORTHO05D003970 1.7e-155 553.1 357 78.7
Ciclev10000395m.g Citrus clementina HOM05D003420 ORTHO05D003970 7.2e-154 547.7 345 78.6
Pp3c8_3920 Physcomitrium patens HOM05D003420 ORTHO05D003970 3.2e-146 522.3 409 61.1
RcHm_v2.0_Chr1g0335041 Rosa chinensis HOM05D003420 ORTHO05D003970 1.1e-133 480.7 285 83.2
unitig_46.g18008 Utricularia gibba HOM05D003420 ORTHO05D003970 3.5e-132 475.7 423 59.3
AagrBONN_evm.TU.Sc2ySwM_228.2748 Anthoceros agrestis HOM05D003420 ORTHO05D003970 4.9e-126 455.3 411 56.7
Zm00001eb194380 Zea mays HOM05D003420 ORTHO05D003970 1.1e-122 444.1 282 75.9
CBR_g30506 Chara braunii HOM05D003420 ORTHO05D003970 8.3e-118 427.9 411 50.4
CDE04G0884 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.4e-112 410.6 366 61.5
BolC6t38648H Brassica oleracea HOM05D003420 ORTHO05D003970 4.0e-112 409.1 341 65.4
VMungo0331G0815 Vigna mungo HOM05D003420 ORTHO05D003970 1.9e-109 400.2 229 85.6
AUR62027529 Chenopodium quinoa HOM05D003420 ORTHO05D003970 4.3e-106 389.0 254 78.7
AagrBONN_evm.TU.Sc2ySwM_117.1498 Anthoceros agrestis HOM05D003420 ORTHO05D003970 7.3e-106 388.3 348 56.6
MBI02_g35948_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 2.4e-101 373.2 299 64.5
TWI32G0245 Tripterygium wilfordii HOM05D003420 ORTHO05D003970 5.2e-96 355.5 228 77.2
Oeu042182.1 Olea europaea HOM05D003420 ORTHO05D003970 9.9e-95 351.3 187 89.8
QL02p034918 Quercus lobata HOM05D003420 ORTHO05D003970 1.7e-94 350.5 343 57.7
Ca_19959_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 6.0e-92 342.0 218 80.3
QL05p025142 Quercus lobata HOM05D003420 ORTHO05D003970 2.4e-88 330.1 186 86.0
QL05p025121 Quercus lobata HOM05D003420 ORTHO05D003970 6.9e-88 328.6 359 53.8
SHI09126 Sapria himalayana HOM05D003420 ORTHO05D003970 2.6e-87 326.6 237 70.9
VMungo0331G1041 Vigna mungo HOM05D003420 ORTHO05D003970 6.6e-83 312.0 194 82.0
QL02p034947 Quercus lobata HOM05D003420 ORTHO05D003970 8.7e-83 311.6 194 81.4
COL.COLO4_12104 Corchorus olitorius HOM05D003420 ORTHO05D003970 6.4e-78 295.4 386 48.7
Haze_13393 Corylus avellana HOM05D003420 ORTHO05D003970 8.7e-75 285.0 171 83.6
Glyma.03G026300 Glycine max HOM05D003420 ORTHO05D003970 5.6e-74 282.3 216 69.4
SEGI_39176 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 2.2e-70 270.4 183 73.2
CDE06G0862 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 9.6e-66 255.0 181 70.7
Haze_13387 Corylus avellana HOM05D003420 ORTHO05D003970 1.3e-65 254.6 164 81.1
Ca_19958_v3 Cicer arietinum L. HOM05D003420 ORTHO05D003970 2.1e-60 237.3 173 72.8
Glyma.03G026100 Glycine max HOM05D003420 ORTHO05D003970 9.0e-56 221.9 118 91.5
RcHm_v2.0_Chr1g0335051 Rosa chinensis HOM05D003420 ORTHO05D003970 9.0e-56 221.9 118 91.5
Glyma.03G026400 Glycine max HOM05D003420 ORTHO05D003970 1.5e-55 221.1 118 91.5
CDE06G1435 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.4e-53 214.5 118 88.1
AUR62027528 Chenopodium quinoa HOM05D003420 ORTHO05D003970 7.2e-53 212.2 118 87.3
HPP92_002340 Vanilla planifolia HOM05D003420 ORTHO05D003970 1.2e-52 211.5 118 88.1
Cc00_g30250 Coffea canephora HOM05D003420 ORTHO05D003970 6.1e-52 209.1 147 73.5
Cre17.g744847 Chlamydomonas reinhardtii HOM05D003420 ORTHO05D003970 5.3e-48 196.1 390 32.3
SEGI_21874 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 9.4e-45 185.3 113 78.8
CDE04G2480 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 1.2e-39 168.3 104 78.8
CDE06G1802 Ceratophyllum demersum HOM05D003420 ORTHO05D003970 4.7e-36 156.4 97 73.2
MCO11G044 Micromonas commoda HOM05D003420 ORTHO05D003970 1.1e-29 135.2 384 26.0
SEGI_07888 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 9.4e-29 132.1 93 65.6
Sc02g0003480 Simmondsia chinensis HOM05D003420 ORTHO05D003970 1.4e-27 128.3 75 82.7
vmacro03706 Vaccinium macrocarpon HOM05D003420 ORTHO05D003970 2.4e-24 117.5 141 51.1
Cpa.g.sc66.124 Carica papaya HOM05D003420 ORTHO05D003970 2.0e-23 114.4 65 86.2
SEGI_29399 Sequoiadendron giganteum HOM05D003420 ORTHO05D003970 8.8e-19 99.0 105 51.4
ATR0824G022 Amborella trichopoda HOM05D003420 ORTHO05D003970 3.4e-18 97.1 63 69.8
MBI02_g35947_MAGBIO Magnolia biondii HOM05D003420 ORTHO05D003970 3.8e-14 83.6 48 89.6


User provided reference genes

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