Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C682T8 Lonicera japonica HOM05D005898 ORTHO05D007493 7.8e-46 186.8 97 100.0
Lj4C681T5 Lonicera japonica HOM05D005898 ORTHO05D007493 3.3e-36 154.8 93 83.9
MBI06_g35214_MAGBIO Magnolia biondii HOM05D005898 ORTHO05D007493 1.0e-29 133.3 93 68.8
PGSC0003DMG400025321 Solanum tuberosum HOM05D005898 ORTHO05D007493 1.3e-29 132.9 93 68.8
Nitab4.5_0003978g0050 Nicotiana tabacum HOM05D005898 ORTHO05D007493 1.8e-29 132.5 93 69.9
TAR381G0459 Trochodendron aralioides HOM05D005898 ORTHO05D007493 1.8e-29 132.5 93 66.7
Dinv27268 Davidia involucrata HOM05D005898 ORTHO05D007493 2.3e-29 132.1 93 68.8
Solyc04g057890.3 Solanum lycopersicum HOM05D005898 ORTHO05D007493 2.3e-29 132.1 93 67.7
Ah.05g169090 Amaranthus hybridus HOM05D005898 ORTHO05D007493 3.0e-29 131.7 93 67.7
Sopen04g025740 Solanum pennellii HOM05D005898 ORTHO05D007493 3.0e-29 131.7 93 67.7
Dinv14694 Davidia involucrata HOM05D005898 ORTHO05D007493 3.9e-29 131.3 92 67.4
Peaxi162Scf00066g00224 Petunia axillaris HOM05D005898 ORTHO05D007493 3.9e-29 131.3 93 67.7
Haze_17639 Corylus avellana HOM05D005898 ORTHO05D007493 6.7e-29 130.6 92 69.6
Manes.02G168700 Manihot esculenta HOM05D005898 ORTHO05D007493 8.7e-29 130.2 93 66.7
Nitab4.5_0000317g0210 Nicotiana tabacum HOM05D005898 ORTHO05D007493 1.5e-28 129.4 93 67.7
CAN.G716.15 Capsicum annuum HOM05D005898 ORTHO05D007493 1.9e-28 129.0 93 67.7
COL.COLO4_35486 Corchorus olitorius HOM05D005898 ORTHO05D007493 2.5e-28 128.6 93 65.6
Duzib041G0058 Durio zibethinus HOM05D005898 ORTHO05D007493 4.3e-28 127.9 93 65.6
Prupe.1G489200 Prunus persica HOM05D005898 ORTHO05D007493 9.6e-28 126.7 92 66.3
TWI34G0248 Tripterygium wilfordii HOM05D005898 ORTHO05D007493 9.6e-28 126.7 93 66.7
AUR62007708 Chenopodium quinoa HOM05D005898 ORTHO05D007493 1.3e-27 126.3 93 64.5
CANSAT25G1205 Cannabis sativa HOM05D005898 ORTHO05D007493 2.1e-27 125.6 93 63.4
Cc10_g13730 Coffea canephora HOM05D005898 ORTHO05D007493 2.1e-27 125.6 93 66.7
CiPaw.15G031100 Carya illinoinensis HOM05D005898 ORTHO05D007493 2.8e-27 125.2 93 66.7
Eucgr.E01005 Eucalyptus grandis HOM05D005898 ORTHO05D007493 2.8e-27 125.2 93 64.5
Sabra05G0138000 Salix brachista HOM05D005898 ORTHO05D007493 2.8e-27 125.2 93 62.4
Thecc.08G133400 Theobroma cacao HOM05D005898 ORTHO05D007493 2.8e-27 125.2 92 66.3
Ciclev10002166m.g Citrus clementina HOM05D005898 ORTHO05D007493 3.7e-27 124.8 93 64.5
Cpa.g.sc26.314 Carica papaya HOM05D005898 ORTHO05D007493 4.8e-27 124.4 93 63.4
AUR62013433 Chenopodium quinoa HOM05D005898 ORTHO05D007493 4.8e-27 124.4 93 63.4
PSO528G0126 Papaver somniferum HOM05D005898 ORTHO05D007493 4.8e-27 124.4 92 66.3
Potri.005G182000 Populus trichocarpa HOM05D005898 ORTHO05D007493 6.2e-27 124.0 92 65.2
CSS0002345 Camellia sinensis var. sinensis HOM05D005898 ORTHO05D007493 1.8e-26 122.5 93 65.6
CSS0024013 Camellia sinensis var. sinensis HOM05D005898 ORTHO05D007493 1.8e-26 122.5 93 65.6
ECA236G4352 Erigeron canadensis HOM05D005898 ORTHO05D007493 1.8e-26 122.5 93 64.5
RcHm_v2.0_Chr6g0296751 Rosa chinensis HOM05D005898 ORTHO05D007493 2.4e-26 122.1 92 66.3
vmacro20860 Vaccinium macrocarpon HOM05D005898 ORTHO05D007493 3.1e-26 121.7 92 65.2
PSO170G0207 Papaver somniferum HOM05D005898 ORTHO05D007493 4.0e-26 121.3 92 65.2
QL09p032362 Quercus lobata HOM05D005898 ORTHO05D007493 4.0e-26 121.3 93 63.4
BcaC08g47621 Brassica carinata HOM05D005898 ORTHO05D007493 5.3e-26 120.9 96 62.5
C06p51450 Brassica napus HOM05D005898 ORTHO05D007493 5.3e-26 120.9 96 62.5
BolC6t40163H Brassica oleracea HOM05D005898 ORTHO05D007493 5.3e-26 120.9 96 62.5
Ca_16611_v3 Cicer arietinum L. HOM05D005898 ORTHO05D007493 5.3e-26 120.9 93 62.4
Psat5g084560 Pisum sativum HOM05D005898 ORTHO05D007493 5.3e-26 120.9 93 62.4
GSVIVG01008804001 Vitis vinifera HOM05D005898 ORTHO05D007493 5.3e-26 120.9 93 61.3
A07p42830 Brassica napus HOM05D005898 ORTHO05D007493 6.9e-26 120.6 96 62.5
BraA07t31804Z Brassica rapa HOM05D005898 ORTHO05D007493 6.9e-26 120.6 96 62.5
Medtr3g088635 Medicago truncatula HOM05D005898 ORTHO05D007493 9.0e-26 120.2 93 61.3
DCAR_014367 Daucus carota HOM05D005898 ORTHO05D007493 1.2e-25 119.8 93 63.4
Nn1g08950 Nelumbo nucifera HOM05D005898 ORTHO05D007493 1.2e-25 119.8 93 60.2
Sp5g32460 Schrenkiella parvula HOM05D005898 ORTHO05D007493 1.5e-25 119.4 93 62.4
TPR.G21851 Trifolium pratense HOM05D005898 ORTHO05D007493 1.5e-25 119.4 93 62.4
HPP92_005662 Vanilla planifolia HOM05D005898 ORTHO05D007493 2.6e-25 118.6 93 64.5
AT1G77290 Arabidopsis thaliana HOM05D005898 ORTHO05D007493 3.4e-25 118.2 93 62.4
arahy.Tifrunner.gnm1.ann1.74JCE2 Arachis hypogaea HOM05D005898 ORTHO05D007493 3.4e-25 118.2 93 59.1
arahy.Tifrunner.gnm1.ann1.XM429X Arachis hypogaea HOM05D005898 ORTHO05D007493 3.4e-25 118.2 93 59.1
CAN.G531.17 Capsicum annuum HOM05D005898 ORTHO05D007493 4.5e-25 117.9 93 64.5
FvH4_2g27900 Fragaria vesca HOM05D005898 ORTHO05D007493 4.5e-25 117.9 92 62.0
FAN24G0310 Fragaria x ananassa HOM05D005898 ORTHO05D007493 4.5e-25 117.9 92 62.0
Rhsim07G0179900 Rhododendron simsii HOM05D005898 ORTHO05D007493 4.5e-25 117.9 92 63.0
THA.LOC104812081 Tarenaya hassleriana HOM05D005898 ORTHO05D007493 4.5e-25 117.9 94 61.7
EL10Ac1g01360 Beta vulgaris HOM05D005898 ORTHO05D007493 5.8e-25 117.5 93 59.1
Oeu026373.1 Olea europaea HOM05D005898 ORTHO05D007493 5.8e-25 117.5 93 57.0
PGR044G1855 Punica granatum HOM05D005898 ORTHO05D007493 5.8e-25 117.5 93 60.2
AL2G37490 Arabidopsis lyrata HOM05D005898 ORTHO05D007493 9.9e-25 116.7 93 61.3
Hma1.2p1_1121F.1_g259260 Hydrangea macrophylla HOM05D005898 ORTHO05D007493 9.9e-25 116.7 93 58.1
Carub.0002s2417 Capsella rubella HOM05D005898 ORTHO05D007493 1.3e-24 116.3 93 61.3
FAN20G2399 Fragaria x ananassa HOM05D005898 ORTHO05D007493 1.3e-24 116.3 92 62.0
Glyma.06G117800 Glycine max HOM05D005898 ORTHO05D007493 1.3e-24 116.3 93 61.3
HanXRQChr02g0045111 Helianthus annuus HOM05D005898 ORTHO05D007493 1.3e-24 116.3 93 61.3
Lj1g0001609 Lotus japonicus HOM05D005898 ORTHO05D007493 1.3e-24 116.3 93 59.1
Actinidia29492 Actinidia chinensis HOM05D005898 ORTHO05D007493 1.7e-24 115.9 93 60.2
Aa31LG4G7300 Aethionema arabicum HOM05D005898 ORTHO05D007493 1.7e-24 115.9 93 62.4
ClCG11G016010 Citrullus lanatus HOM05D005898 ORTHO05D007493 1.7e-24 115.9 93 60.2
FAN15G2418 Fragaria x ananassa HOM05D005898 ORTHO05D007493 2.2e-24 115.5 92 60.9
FAN15G2964 Fragaria x ananassa HOM05D005898 ORTHO05D007493 2.2e-24 115.5 92 60.9
Glyma.13G034200 Glycine max HOM05D005898 ORTHO05D007493 2.2e-24 115.5 93 61.3
Os04g0435500 Oryza sativa ssp. japonica HOM05D005898 ORTHO05D007493 2.2e-24 115.5 93 58.1
Atru.chr13.1575 Acer truncatum HOM05D005898 ORTHO05D007493 2.9e-24 115.2 92 59.8
MD15G1133600 Malus domestica HOM05D005898 ORTHO05D007493 3.8e-24 114.8 92 60.9
VMungo1309G0075 Vigna mungo HOM05D005898 ORTHO05D007493 3.8e-24 114.8 93 58.1
Glyma.14G155200 Glycine max HOM05D005898 ORTHO05D007493 4.9e-24 114.4 93 60.2
Lalb_Chr08g0241041 Lupinus albus HOM05D005898 ORTHO05D007493 4.9e-24 114.4 93 58.1
Sc26g0002800 Simmondsia chinensis HOM05D005898 ORTHO05D007493 4.9e-24 114.4 93 59.1
CARHR070800 Cardamine hirsuta HOM05D005898 ORTHO05D007493 6.4e-24 114.0 93 59.1
Thhalv10019613m.g Eutrema salsugineum HOM05D005898 ORTHO05D007493 6.4e-24 114.0 92 60.9
Zm00001eb082540 Zea mays HOM05D005898 ORTHO05D007493 8.4e-24 113.6 93 55.9
CsaV3_4G028000 Cucumis sativus L. HOM05D005898 ORTHO05D007493 1.1e-23 113.2 93 58.1
Eucgr.C00041 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.1e-23 113.2 92 60.9
Lsat_1_v5_gn_1_7480 Lactuca sativa HOM05D005898 ORTHO05D007493 1.1e-23 113.2 93 58.1
Aqoxy6G00307 Aquilegia oxysepala HOM05D005898 ORTHO05D007493 1.4e-23 112.8 93 58.1
Phvul.001G068100 Phaseolus vulgaris HOM05D005898 ORTHO05D007493 1.4e-23 112.8 93 59.1
MSTRG.1410 Avicennia marina HOM05D005898 ORTHO05D007493 1.9e-23 112.5 93 58.1
MELO3C010516.2 Cucumis melo HOM05D005898 ORTHO05D007493 1.9e-23 112.5 93 58.1
VMungo0647G2141 Vigna mungo HOM05D005898 ORTHO05D007493 1.9e-23 112.5 93 59.1
Eucgr.B02072 Eucalyptus grandis HOM05D005898 ORTHO05D007493 2.4e-23 112.1 92 62.0
Phvul.009G130200 Phaseolus vulgaris HOM05D005898 ORTHO05D007493 2.4e-23 112.1 93 58.1
Gohir.A02G110700 Gossypium hirsutum HOM05D005898 ORTHO05D007493 4.2e-23 111.3 93 55.9
Gohir.D03G069006 Gossypium hirsutum HOM05D005898 ORTHO05D007493 4.2e-23 111.3 93 55.9
Gorai.013G108000 Gossypium raimondii HOM05D005898 ORTHO05D007493 4.2e-23 111.3 93 55.9
Sed0026006 Sechium edule HOM05D005898 ORTHO05D007493 4.2e-23 111.3 93 58.1
Migut.C01068 Erythranthe guttata HOM05D005898 ORTHO05D007493 1.6e-22 109.4 93 57.0
Lalb_Chr11g0066191 Lupinus albus HOM05D005898 ORTHO05D007493 2.7e-22 108.6 93 54.8
Eucgr.A01942 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.3e-21 106.3 109 54.1
Eucgr.H02194 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.3e-21 106.3 109 54.1
Eucgr.H02561 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.3e-21 106.3 109 54.1
Eucgr.J01273 Eucalyptus grandis HOM05D005898 ORTHO05D007493 1.3e-21 106.3 109 54.1
CSS0035583 Camellia sinensis var. sinensis HOM05D005898 ORTHO05D007493 1.5e-20 102.8 92 59.8
ATR0584G218 Amborella trichopoda HOM05D005898 ORTHO05D007493 7.4e-20 100.5 93 51.6
SGA_v2.0_scaffold52G18918 Striga asiatica HOM05D005898 ORTHO05D007493 1.6e-19 99.4 93 51.6
unitig_0.g2114 Utricularia gibba HOM05D005898 ORTHO05D007493 1.6e-19 99.4 92 51.1
VMungo0251G2592 Vigna mungo HOM05D005898 ORTHO05D007493 1.6e-19 99.4 79 60.8
SEGI_40355 Sequoiadendron giganteum HOM05D005898 ORTHO05D007493 3.5e-14 81.6 93 44.1
SMO116G0017 Selaginella moellendorffii HOM05D005898 ORTHO05D007493 6.7e-13 77.4 92 43.5
CAN.G749.9 Capsicum annuum HOM05D005898 ORTHO05D008629 1.3e-11 73.2 74 48.6
SEGI_24309 Sequoiadendron giganteum HOM05D005898 ORTHO05D007493 1.4e-10 69.7 91 39.6
Pp3c4_7330 Physcomitrium patens HOM05D005898 ORTHO05D007493 1.8e-10 69.3 93 36.6
Mapoly0029s0068 Marchantia polymorpha HOM05D005898 ORTHO05D007493 4.6e-06 54.7 93 30.1
Pp3c7_4180 Physcomitrium patens HOM05D005898 ORTHO05D007493 4.6e-06 54.7 86 33.7


User provided reference genes

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