Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C650T12 Lonicera japonica HOM05D013022 ORTHO05D007252 1.4e-124 449.5 210 100.0
Lj4A648G14 Lonicera japonica HOM05D013022 ORTHO05D007252 8.8e-103 377.1 192 89.6
Lj4A650T22 Lonicera japonica HOM05D013022 ORTHO05D007252 7.2e-97 357.5 178 91.0
Lj4A649T29 Lonicera japonica HOM05D013022 ORTHO05D007252 2.1e-96 355.9 178 90.4
Lj4C648G7 Lonicera japonica HOM05D013022 ORTHO05D007252 2.3e-58 229.6 119 90.8
COL.COLO4_10484 Corchorus olitorius HOM05D013022 ORTHO05D007252 3.0e-18 96.3 183 35.0
Hma1.2p1_0022F.1_g014760 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 9.1e-15 84.7 178 27.5
Thecc.02G329300 Theobroma cacao HOM05D013022 ORTHO05D007252 1.3e-13 80.9 142 34.5
Rhsim03G0268000 Rhododendron simsii HOM05D000007 ORTHO05D007252 2.9e-13 79.7 178 25.8
Rhsim07G0245000 Rhododendron simsii HOM05D001026 ORTHO05D007252 2.9e-13 79.7 178 25.8
TAR374G0955 Trochodendron aralioides HOM05D013022 ORTHO05D007252 2.9e-13 79.7 153 29.4
TAR374G0551 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.5e-13 78.6 162 30.9
Dinv18626 Davidia involucrata HOM05D009844 ORTHO05D007252 2.7e-11 73.2 153 32.0
Dinv26242 Davidia involucrata HOM05D009844 ORTHO05D007252 2.7e-11 73.2 153 32.0
TAR375G0750 Trochodendron aralioides HOM05D000007 ORTHO05D007252 6.1e-11 72.0 189 28.6
Dinv26480 Davidia involucrata HOM05D009844 ORTHO05D007252 1.0e-10 71.2 186 25.3
TAR375G0745 Trochodendron aralioides HOM05D000007 ORTHO05D007252 1.0e-10 71.2 123 32.5
Actinidia38511 Actinidia chinensis HOM05D000007 ORTHO05D007252 3.0e-10 69.7 179 24.6
Dinv26455 Davidia involucrata HOM05D000007 ORTHO05D013933 5.1e-10 68.9 171 28.1
MBI19_g26733_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 5.1e-10 68.9 192 27.1
MBI19_g35552_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D000017 2.0e-09 67.0 182 26.4
Nitab4.5_0001504g0050 Nicotiana tabacum HOM05D004526 ORTHO05D005548 2.6e-09 66.6 138 29.7
Nitab4.5_0007469g0010 Nicotiana tabacum HOM05D000007 ORTHO05D007252 3.3e-09 66.2 177 26.6
CSS0034833 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 5.7e-09 65.5 135 28.9
MSTRG.5952 Avicennia marina HOM05D000007 ORTHO05D007252 7.4e-09 65.1 179 25.1
CSS0040592 Camellia sinensis var. sinensis HOM05D000007 ORTHO05D003666 9.7e-09 64.7 135 28.1
Sp5g30880 Schrenkiella parvula HOM05D011922 ORTHO05D007252 8.2e-08 61.6 180 26.1
MBI19_g26732_MAGBIO Magnolia biondii HOM05D000007 ORTHO05D007252 1.4e-07 60.8 205 27.3
BcaC08g45557 Brassica carinata HOM05D011922 ORTHO05D007252 1.8e-07 60.5 192 24.5
Carub.0002s2261 Capsella rubella HOM05D011922 ORTHO05D007252 1.8e-07 60.5 194 24.7
Cc00_g32990 Coffea canephora HOM05D000007 ORTHO05D000521 1.8e-07 60.5 119 32.8
BolC6t38364H Brassica oleracea HOM05D011922 ORTHO05D007252 2.4e-07 60.1 192 24.0
Nitab4.5_0000157g0070 Nicotiana tabacum HOM05D000007 ORTHO05D007252 2.4e-07 60.1 161 27.3
Rhsim11G0104400 Rhododendron simsii HOM05D007560 ORTHO05D005947 3.1e-07 59.7 180 25.6
C06p32410 Brassica napus HOM05D011922 ORTHO05D007252 5.3e-07 58.9 192 24.0
Dinv36193 Davidia involucrata HOM05D003981 ORTHO05D003666 5.3e-07 58.9 112 30.4
Cc06_g13930 Coffea canephora HOM05D000007 ORTHO05D000521 9.1e-07 58.2 118 33.1
BcaB02g07042 Brassica carinata HOM05D011922 ORTHO05D007252 1.2e-06 57.8 175 25.7
Migut.C01223 Erythranthe guttata HOM05D000007 ORTHO05D000521 1.2e-06 57.8 179 27.9
Nitab4.5_0001504g0060 Nicotiana tabacum HOM05D000007 ORTHO05D007252 1.2e-06 57.8 112 31.2
Peaxi162Scf00783g00335 Petunia axillaris HOM05D009844 ORTHO05D007252 2.0e-06 57.0 121 28.9
Sp4g22180 Schrenkiella parvula HOM05D011922 ORTHO05D007252 2.0e-06 57.0 180 24.4
TAR371G0292 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-06 57.0 140 27.1
TAR371G0448 Trochodendron aralioides HOM05D000007 ORTHO05D007252 2.0e-06 57.0 134 30.6
Actinidia38508 Actinidia chinensis HOM05D000007 ORTHO05D013933 3.5e-06 56.2 143 28.0
Lj5C63G13 Lonicera japonica HOM05D013022 ORTHO05D007252 3.5e-06 56.2 96 38.5
TAR371G1173 Trochodendron aralioides HOM05D000007 ORTHO05D007252 4.5e-06 55.8 119 28.6
A07p28710 Brassica napus HOM05D011922 ORTHO05D007252 5.9e-06 55.5 192 24.0
TAR371G0430 Trochodendron aralioides HOM05D000007 ORTHO05D007252 5.9e-06 55.5 140 27.1
Dinv21217 Davidia involucrata HOM05D000007 ORTHO05D007252 7.7e-06 55.1 170 26.5
Hma1.2p1_0084F.1_g043690 Hydrangea macrophylla HOM05D000007 ORTHO05D007252 7.7e-06 55.1 188 24.5


User provided reference genes

Program Settings