Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C628G13 Lonicera japonica HOM05D006264 ORTHO05D007739 4.3e-197 691.0 329 100.0
Actinidia29470 Actinidia chinensis HOM05D006264 ORTHO05D007739 1.0e-169 600.1 329 83.0
Dinv27304 Davidia involucrata HOM05D006264 ORTHO05D007739 1.0e-169 600.1 329 85.4
Ciclev10001823m.g Citrus clementina HOM05D006264 ORTHO05D007739 2.2e-169 599.0 329 83.3
Cc10_g12020 Coffea canephora HOM05D006264 ORTHO05D007739 5.5e-168 594.3 329 83.0
CSS0035031 Camellia sinensis var. sinensis HOM05D006264 ORTHO05D007739 1.6e-167 592.8 329 83.9
Thecc.08G126800 Theobroma cacao HOM05D006264 ORTHO05D007739 1.6e-167 592.8 329 82.7
MD15G1347000 Malus domestica HOM05D006264 ORTHO05D007739 6.1e-167 590.9 329 83.9
Oeu040415.1 Olea europaea HOM05D006264 ORTHO05D007739 1.0e-166 590.1 329 83.0
arahy.Tifrunner.gnm1.ann1.YYE7NP Arachis hypogaea HOM05D006264 ORTHO05D007739 1.8e-166 589.3 328 81.1
arahy.Tifrunner.gnm1.ann1.W8H4W4 Arachis hypogaea HOM05D006264 ORTHO05D007739 8.8e-166 587.0 328 80.8
TAR381G1225 Trochodendron aralioides HOM05D006264 ORTHO05D007739 2.0e-165 585.9 329 83.0
Prupe.1G494700 Prunus persica HOM05D006264 ORTHO05D007739 3.3e-165 585.1 329 83.3
Nn1g08814 Nelumbo nucifera HOM05D006264 ORTHO05D007739 4.4e-165 584.7 329 83.0
MSTRG.1441 Avicennia marina HOM05D006264 ORTHO05D007739 7.5e-165 583.9 329 82.4
QL09p034323 Quercus lobata HOM05D006264 ORTHO05D007739 7.5e-165 583.9 328 81.1
CsaV3_4G028200 Cucumis sativus L. HOM05D006264 ORTHO05D007739 8.2e-164 580.5 329 80.2
FAN15G0088 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.8e-163 579.3 330 81.2
Glyma.06G115200 Glycine max HOM05D006264 ORTHO05D007739 2.4e-163 578.9 327 81.0
Sed0004807 Sechium edule HOM05D006264 ORTHO05D007739 2.4e-163 578.9 329 80.5
MELO3C010482.2 Cucumis melo HOM05D006264 ORTHO05D007739 5.3e-163 577.8 329 80.2
FAN24G2929 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.2e-162 576.6 328 80.8
Glyma.04G247500 Glycine max HOM05D006264 ORTHO05D007739 1.2e-162 576.6 328 81.4
COL.COLO4_04990 Corchorus olitorius HOM05D006264 ORTHO05D007739 1.6e-162 576.2 329 80.5
FAN20G0424 Fragaria x ananassa HOM05D006264 ORTHO05D007739 1.6e-162 576.2 330 80.9
PGSC0003DMG400000884 Solanum tuberosum HOM05D006264 ORTHO05D007739 2.0e-162 575.9 329 81.5
Lj1g0001411 Lotus japonicus HOM05D006264 ORTHO05D007739 2.7e-162 575.5 327 81.0
Medtr3g088580 Medicago truncatula HOM05D006264 ORTHO05D007739 2.7e-162 575.5 327 80.1
CAN.G2.26 Capsicum annuum HOM05D006264 ORTHO05D007739 3.5e-162 575.1 326 81.3
Lalb_Chr08g0241301 Lupinus albus HOM05D006264 ORTHO05D007739 3.5e-162 575.1 329 80.2
PGR044G1646 Punica granatum HOM05D006264 ORTHO05D007739 3.5e-162 575.1 329 80.5
RcHm_v2.0_Chr6g0295971 Rosa chinensis HOM05D006264 ORTHO05D007739 7.7e-162 573.9 329 80.5
Solyc11g012830.3 Solanum lycopersicum HOM05D006264 ORTHO05D007739 2.2e-161 572.4 329 80.5
Lalb_Chr11g0066051 Lupinus albus HOM05D006264 ORTHO05D007739 2.9e-161 572.0 327 80.1
Rhsim11G0069200 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.9e-161 572.0 332 80.4
CANSAT11G2315 Cannabis sativa HOM05D006264 ORTHO05D007739 5.0e-161 571.2 329 79.6
Phvul.009G127300 Phaseolus vulgaris HOM05D006264 ORTHO05D007739 5.0e-161 571.2 327 80.4
HanXRQChr05g0151071 Helianthus annuus HOM05D006264 ORTHO05D007739 6.5e-161 570.9 329 79.6
VMungo1309G2910 Vigna mungo HOM05D006264 ORTHO05D007739 6.5e-161 570.9 327 80.4
Gohir.D06G045800 Gossypium hirsutum HOM05D006264 ORTHO05D007739 5.5e-160 567.8 318 82.4
Gorai.010G051000 Gossypium raimondii HOM05D006264 ORTHO05D007739 5.5e-160 567.8 318 82.4
THA.LOC104810199 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 7.2e-160 567.4 330 80.3
Nitab4.5_0001996g0020 Nicotiana tabacum HOM05D006264 ORTHO05D007739 1.2e-159 566.6 326 80.4
TAR625G1219 Trochodendron aralioides HOM05D006264 ORTHO05D007739 1.2e-159 566.6 329 79.0
vmacro00839 Vaccinium macrocarpon HOM05D006264 ORTHO05D007739 4.7e-159 564.7 329 80.9
Eucgr.F04347 Eucalyptus grandis HOM05D006264 ORTHO05D007739 1.0e-158 563.5 329 79.0
Ca_27657_v3 Cicer arietinum L. HOM05D006264 ORTHO05D007739 5.2e-158 561.2 328 79.3
CARHR022150 Cardamine hirsuta HOM05D006264 ORTHO05D007739 2.6e-157 558.9 331 79.8
arahy.Tifrunner.gnm1.ann1.9W7Z3M Arachis hypogaea HOM05D006264 ORTHO05D007739 5.7e-157 557.8 336 76.5
Haze_00430 Corylus avellana HOM05D006264 ORTHO05D007739 5.7e-157 557.8 341 76.2
Aa31LG7G5740 Aethionema arabicum HOM05D006264 ORTHO05D007739 9.8e-157 557.0 331 79.5
Sp1g19320 Schrenkiella parvula HOM05D006264 ORTHO05D007739 9.8e-157 557.0 331 79.2
Hund17298 Selenicereus undatus HOM05D006264 ORTHO05D007739 4.8e-156 554.7 327 78.6
FvH4_2g27090 Fragaria vesca HOM05D006264 ORTHO05D007739 1.8e-155 552.7 326 77.0
BcaB07g32175 Brassica carinata HOM05D006264 ORTHO05D007739 4.1e-155 551.6 331 78.5
AT1G21760 Arabidopsis thaliana HOM05D006264 ORTHO05D007739 1.2e-154 550.1 331 77.6
TPR.G13464 Trifolium pratense HOM05D006264 ORTHO05D007739 1.6e-154 549.7 328 77.1
TWI60G1034 Tripterygium wilfordii HOM05D006264 ORTHO05D007739 1.6e-154 549.7 328 77.7
BcaC05g26098 Brassica carinata HOM05D006264 ORTHO05D007739 2.7e-154 548.9 331 78.5
Sc02g0005000 Simmondsia chinensis HOM05D006264 ORTHO05D007739 2.7e-154 548.9 329 77.2
Migut.C01127 Erythranthe guttata HOM05D006264 ORTHO05D007739 4.5e-154 548.1 329 78.4
A06p17870 Brassica napus HOM05D006264 ORTHO05D007739 2.9e-153 545.4 347 75.5
CiPaw.05G220800 Carya illinoinensis HOM05D006264 ORTHO05D007739 1.9e-152 542.7 329 76.0
BraA06t24877Z Brassica rapa HOM05D006264 ORTHO05D007739 3.2e-152 542.0 341 75.7
Carub.0001s2122 Capsella rubella HOM05D006264 ORTHO05D007739 5.5e-152 541.2 331 77.9
MBI16_g07653_MAGBIO Magnolia biondii HOM05D006264 ORTHO05D007739 5.5e-152 541.2 329 75.7
EL10Ac1g01023 Beta vulgaris HOM05D006264 ORTHO05D007739 1.2e-151 540.0 329 76.9
ClCG11G015780 Citrullus lanatus HOM05D006264 ORTHO05D007739 1.2e-151 540.0 309 79.0
BolC5t30776H Brassica oleracea HOM05D006264 ORTHO05D007739 2.1e-151 539.3 338 76.0
Peaxi162Scf00914g00315 Petunia axillaris HOM05D006264 ORTHO05D007739 3.6e-151 538.5 311 81.0
Aqoxy6G00234 Aquilegia oxysepala HOM05D006264 ORTHO05D007739 8.0e-151 537.3 319 77.4
SGA_v2.0_scaffold24G10459 Striga asiatica HOM05D006264 ORTHO05D007739 1.7e-148 529.6 329 76.0
Lsat_1_v5_gn_6_112861 Lactuca sativa HOM05D006264 ORTHO05D007739 6.3e-148 527.7 327 76.1
Duzib093G0816 Durio zibethinus HOM05D006264 ORTHO05D007739 1.4e-147 526.6 329 76.3
AUR62019071 Chenopodium quinoa HOM05D006264 ORTHO05D007739 4.1e-147 525.0 327 75.8
AUR62014328 Chenopodium quinoa HOM05D006264 ORTHO05D007739 7.0e-147 524.2 327 75.5
C05p20770 Brassica napus HOM05D006264 ORTHO05D007739 1.0e-145 520.4 313 77.3
Manes.02G164400 Manihot esculenta HOM05D006264 ORTHO05D007739 5.6e-144 514.6 329 71.7
PSO170G1538 Papaver somniferum HOM05D006264 ORTHO05D007739 2.8e-143 512.3 329 71.7
Nitab4.5_0001803g0010 Nicotiana tabacum HOM05D006264 ORTHO05D007739 4.7e-143 511.5 313 78.0
PSO528G0109 Papaver somniferum HOM05D006264 ORTHO05D007739 4.7e-143 511.5 329 71.7
ATR0584G291 Amborella trichopoda HOM05D006264 ORTHO05D007739 1.8e-142 509.6 316 74.7
PSO063G0125 Papaver somniferum HOM05D006264 ORTHO05D007739 4.4e-141 505.0 329 70.8
Potri.005G178600 Populus trichocarpa HOM05D006264 ORTHO05D007739 2.2e-140 502.7 329 72.0
Potri.002G082500 Populus trichocarpa HOM05D006264 ORTHO05D007739 4.9e-140 501.5 329 71.1
CDE02G1850 Ceratophyllum demersum HOM05D006264 ORTHO05D007739 1.8e-139 499.6 329 69.3
GSVIVG01008855001 Vitis vinifera HOM05D006264 ORTHO05D007739 7.3e-136 487.6 329 70.2
HPP92_004401 Vanilla planifolia HOM05D006264 ORTHO05D007739 6.6e-129 464.5 326 64.7
HPP92_027807 Vanilla planifolia HOM05D006264 ORTHO05D007739 1.1e-128 463.8 326 64.4
QL09p034368 Quercus lobata HOM05D006264 ORTHO05D007739 7.3e-128 461.1 254 82.7
THA.LOC104801868 Tarenaya hassleriana HOM05D006264 ORTHO05D007739 1.4e-126 456.8 256 82.8
unitig_748.g7689 Utricularia gibba HOM05D006264 ORTHO05D007739 1.8e-126 456.4 318 69.8
Pp3c3_38060 Physcomitrium patens HOM05D006264 ORTHO05D007739 2.6e-125 452.6 306 68.0
ECA246G2185 Erigeron canadensis HOM05D006264 ORTHO05D007739 7.5e-125 451.1 279 75.3
Thhalv10008543m.g Eutrema salsugineum HOM05D006264 ORTHO05D007739 4.1e-123 445.3 257 80.9
AL1G34960 Arabidopsis lyrata HOM05D006264 ORTHO05D007739 2.1e-122 443.0 255 80.8
Zm00001eb422580 Zea mays HOM05D006264 ORTHO05D007739 5.6e-120 434.9 329 61.7
SMO347G0097 Selaginella moellendorffii HOM05D006264 ORTHO05D007739 6.2e-119 431.4 310 62.9
Sabra02G0064700 Salix brachista HOM05D006264 ORTHO05D007739 1.4e-118 430.3 329 63.5
DCAR_028205 Daucus carota HOM05D006264 ORTHO05D007739 2.4e-118 429.5 255 79.2
Gohir.A06G045300 Gossypium hirsutum HOM05D006264 ORTHO05D007739 2.3e-113 412.9 241 76.8
AagrBONN_evm.TU.Sc2ySwM_117.473 Anthoceros agrestis HOM05D006264 ORTHO05D007739 3.0e-113 412.5 311 60.5
Mapoly0151s0012 Marchantia polymorpha HOM05D006264 ORTHO05D007739 1.8e-110 403.3 318 56.6
Atru.chr13.1491 Acer truncatum HOM05D006264 ORTHO05D007739 1.1e-104 384.0 221 82.4
Sopen11g007570 Solanum pennellii HOM05D006264 ORTHO05D007739 3.3e-96 355.9 199 84.9
CBR_g39544 Chara braunii HOM05D006264 ORTHO05D007739 1.5e-93 347.1 312 52.9
Psat5g086280 Pisum sativum HOM05D006264 ORTHO05D007739 2.3e-81 306.6 166 79.5
Cpa.g.c35582 Carica papaya HOM05D006264 ORTHO05D007739 9.1e-62 241.5 144 77.8
Psat5g086240 Pisum sativum HOM05D006264 ORTHO05D007739 2.6e-56 223.4 133 80.5
Os04g0431200 Oryza sativa ssp. japonica HOM05D006264 ORTHO05D007739 3.2e-51 206.5 142 63.4
MCO07G330 Micromonas commoda HOM05D006264 ORTHO05D007739 8.8e-49 198.4 308 38.3
Cpa.g.sc418.8 Carica papaya HOM05D006264 ORTHO05D007739 3.1e-46 189.9 109 75.2
PRCOL_00004228 Prasinoderma coloniale HOM05D006264 ORTHO05D007739 9.1e-46 188.3 290 37.2
Cre06.g254450 Chlamydomonas reinhardtii HOM05D006264 ORTHO05D007739 1.6e-42 177.6 306 35.3
arahy.Tifrunner.gnm1.ann1.XAL0CN Arachis hypogaea HOM05D003584 ORTHO05D004148 1.5e-32 144.4 109 57.8
Medtr4g068980 Medicago truncatula HOM05D006264 ORTHO05D007739 2.8e-31 140.2 82 72.0
SEGI_39749 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 2.4e-30 137.1 112 64.3
Cpa.g.c45459 Carica papaya HOM05D006264 ORTHO05D007739 1.3e-28 131.3 78 76.9
Zm00001eb082740 Zea mays HOM05D006264 ORTHO05D007739 1.6e-26 124.4 134 51.5
SEGI_38549 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 3.6e-26 123.2 68 75.0
Atru.chr13.1492 Acer truncatum HOM05D006264 ORTHO05D007739 4.9e-23 112.8 72 72.2
Migut.B01582 Erythranthe guttata HOM05D006264 ORTHO05D007739 8.6e-20 102.1 53 83.0
PGSC0003DMG400006698 Solanum tuberosum HOM05D006264 ORTHO05D007739 9.8e-16 88.6 69 58.0
Rhsim11G0069000 Rhododendron simsii HOM05D006264 ORTHO05D007739 2.3e-09 67.4 63 58.7
Actinidia03465 Actinidia chinensis HOM05D006264 ORTHO05D007739 3.1e-09 67.0 38 73.7
SEGI_08627 Sequoiadendron giganteum HOM05D006264 ORTHO05D007739 4.9e-07 59.7 40 60.0


User provided reference genes

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