Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C621T2 Lonicera japonica HOM05D000028 ORTHO05D000296 5.4e-40 167.2 81 100.0
Lj4A621T41 Lonicera japonica HOM05D000028 ORTHO05D000296 1.2e-34 149.4 77 93.5
Dinv40408 Davidia involucrata HOM05D000028 ORTHO05D000296 4.0e-11 71.2 77 51.9
FvH4_2g26690 Fragaria vesca HOM05D000028 ORTHO05D000296 4.0e-11 71.2 82 46.3
FAN15G2600 Fragaria x ananassa HOM05D000028 ORTHO05D000296 6.8e-11 70.5 80 46.2
RcHm_v2.0_Chr6g0295531 Rosa chinensis HOM05D000028 ORTHO05D000296 8.9e-11 70.1 79 46.8
Dinv40412 Davidia involucrata HOM05D000028 ORTHO05D000296 1.3e-09 66.2 60 63.3
DCAR_014098 Daucus carota HOM05D000028 ORTHO05D000296 2.9e-09 65.1 59 54.2
vmacro00821 Vaccinium macrocarpon HOM05D000028 ORTHO05D000296 8.3e-09 63.5 53 60.4
GSVIVG01008890001 Vitis vinifera HOM05D000028 ORTHO05D000296 8.3e-09 63.5 75 42.7
GSVIVG01008889001 Vitis vinifera HOM05D000028 ORTHO05D000296 1.4e-08 62.8 60 50.0
Actinidia03486 Actinidia chinensis HOM05D000028 ORTHO05D000296 7.1e-08 60.5 77 51.9
arahy.Tifrunner.gnm1.ann1.CYY94F Arachis hypogaea HOM05D000028 ORTHO05D000296 7.1e-08 60.5 48 60.4
arahy.Tifrunner.gnm1.ann1.PUN2TH Arachis hypogaea HOM05D000028 ORTHO05D000296 7.1e-08 60.5 48 60.4
RhsimUnG0094100 Rhododendron simsii HOM05D000028 ORTHO05D000296 1.6e-07 59.3 54 57.4
Phvul.009G123700 Phaseolus vulgaris HOM05D000028 ORTHO05D000296 2.7e-07 58.5 48 58.3
Glyma.04G251000 Glycine max HOM05D000028 ORTHO05D000296 3.5e-07 58.2 51 56.9
Lalb_Chr10g0101861 Lupinus albus HOM05D000028 ORTHO05D000296 3.5e-07 58.2 48 62.5
CSS0020215 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 6.0e-07 57.4 78 42.3
CSS0032787 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 6.0e-07 57.4 78 42.3
Prupe.1G500600 Prunus persica HOM05D000028 ORTHO05D000296 7.8e-07 57.0 78 39.7
arahy.Tifrunner.gnm1.ann1.L4R73E Arachis hypogaea HOM05D000028 ORTHO05D000296 1.0e-06 56.6 55 52.7
arahy.Tifrunner.gnm1.ann1.QHG6EX Arachis hypogaea HOM05D000028 ORTHO05D000296 1.0e-06 56.6 55 52.7
Glyma.06G111600 Glycine max HOM05D000028 ORTHO05D000296 1.0e-06 56.6 57 49.1
CSS0044318 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 1.3e-06 56.2 63 52.4
VMungo1309G2931 Vigna mungo HOM05D000028 ORTHO05D000296 1.3e-06 56.2 51 54.9
Glyma.04G251100 Glycine max HOM05D000028 ORTHO05D000296 1.7e-06 55.8 48 60.4
Lj1g0001317 Lotus japonicus HOM05D000028 ORTHO05D000296 1.7e-06 55.8 57 50.9
Gorai.002G221400 Gossypium raimondii HOM05D000028 ORTHO05D000296 2.3e-06 55.5 61 45.9
Lj1g0024139 Lotus japonicus HOM05D000028 ORTHO05D000296 2.3e-06 55.5 52 51.9
CSS0017925 Camellia sinensis var. sinensis HOM05D000028 ORTHO05D000296 3.0e-06 55.1 63 50.8
Medtr3g072530 Medicago truncatula HOM05D000028 ORTHO05D000296 6.6e-06 53.9 54 53.7
Thecc.08G123000 Theobroma cacao HOM05D000028 ORTHO05D000296 6.6e-06 53.9 53 49.1
TPR.G9110 Trifolium pratense HOM05D000028 ORTHO05D000296 6.6e-06 53.9 50 58.0
FAN15G1266 Fragaria x ananassa HOM05D000028 ORTHO05D000296 8.6e-06 53.5 48 52.1
FAN20G2414 Fragaria x ananassa HOM05D000028 ORTHO05D000296 8.6e-06 53.5 53 47.2
FAN27G2146 Fragaria x ananassa HOM05D000028 ORTHO05D000296 8.6e-06 53.5 53 47.2
Glyma.13G077800 Glycine max HOM05D000028 ORTHO05D000296 8.6e-06 53.5 48 52.1
Nn1g08726 Nelumbo nucifera HOM05D000028 ORTHO05D000296 8.6e-06 53.5 54 51.9


User provided reference genes

Program Settings