Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C620T7 Lonicera japonica HOM05D001191 ORTHO05D000979 3.4e-106 388.3 189 100.0
Lj2C268T1 Lonicera japonica HOM05D001191 ORTHO05D000979 3.3e-16 89.4 213 35.7
Nitab4.5_0005074g0020 Nicotiana tabacum HOM05D001191 ORTHO05D000979 6.5e-12 75.1 184 34.8
Cc09_g01600 Coffea canephora HOM05D001191 ORTHO05D000979 1.1e-11 74.3 209 31.6
Nitab4.5_0002827g0040 Nicotiana tabacum HOM05D001191 ORTHO05D000979 2.1e-10 70.1 216 30.1
CSS0049792 Camellia sinensis var. sinensis HOM05D001191 ORTHO05D000979 2.7e-10 69.7 213 31.0
GSVIVG01012718001 Vitis vinifera HOM05D001191 ORTHO05D000979 7.9e-10 68.2 209 31.1
CSS0042040 Camellia sinensis var. sinensis HOM05D001191 ORTHO05D000979 1.0e-09 67.8 213 30.5
Lsat_1_v5_gn_4_60901 Lactuca sativa HOM05D001191 ORTHO05D000979 3.0e-09 66.2 206 32.0
HanXRQChr12g0367551 Helianthus annuus HOM05D001191 ORTHO05D000979 3.9e-09 65.9 210 32.4
Phvul.003G079500 Phaseolus vulgaris HOM05D001191 ORTHO05D000979 3.9e-09 65.9 209 31.1
VMungo1215G1108 Vigna mungo HOM05D001191 ORTHO05D000979 8.7e-09 64.7 209 28.7
Peaxi162Scf01204g00126 Petunia axillaris HOM05D001191 ORTHO05D000979 1.1e-08 64.3 210 31.4
Sabra11G0003600 Salix brachista HOM05D001191 ORTHO05D000979 1.1e-08 64.3 213 31.5
DCAR_008157 Daucus carota HOM05D001191 ORTHO05D000979 1.5e-08 63.9 224 28.6
Actinidia05510 Actinidia chinensis HOM05D001191 ORTHO05D000979 1.9e-08 63.5 209 31.1
Nn1g07155 Nelumbo nucifera HOM05D001191 ORTHO05D000979 1.9e-08 63.5 209 29.2
CAN.G569.3 Capsicum annuum HOM05D001191 ORTHO05D000979 3.3e-08 62.8 214 29.0
TAR627G0590 Trochodendron aralioides HOM05D001191 ORTHO05D000979 3.3e-08 62.8 209 29.2
RcHm_v2.0_Chr5g0002861 Rosa chinensis HOM05D001191 ORTHO05D000979 4.3e-08 62.4 209 30.6
Dinv13899 Davidia involucrata HOM05D001191 ORTHO05D000979 7.4e-08 61.6 209 30.1
Potri.011G004500 Populus trichocarpa HOM05D001191 ORTHO05D000979 7.4e-08 61.6 213 30.5
ECA234G3111 Erigeron canadensis HOM05D001191 ORTHO05D000979 9.7e-08 61.2 211 32.2
Glyma.07G261200 Glycine max HOM05D001191 ORTHO05D000979 9.7e-08 61.2 209 29.2
Solyc02g080610.4 Solanum lycopersicum HOM05D001191 ORTHO05D000979 9.7e-08 61.2 221 27.1
Sopen02g025310 Solanum pennellii HOM05D001191 ORTHO05D000979 9.7e-08 61.2 221 27.1
Aa31LG2G8880 Aethionema arabicum HOM05D001191 ORTHO05D000979 1.6e-07 60.5 209 28.7
Rhsim13G0153200 Rhododendron simsii HOM05D001191 ORTHO05D000979 2.8e-07 59.7 209 30.1
Hund23464 Selenicereus undatus HOM05D001191 ORTHO05D000979 2.8e-07 59.7 209 28.2
COL.COLO4_31784 Corchorus olitorius HOM05D001191 ORTHO05D000979 3.7e-07 59.3 205 30.2
Glyma.17G012800 Glycine max HOM05D001191 ORTHO05D000979 3.7e-07 59.3 209 28.7
TWI38G2238 Tripterygium wilfordii HOM05D001191 ORTHO05D000979 3.7e-07 59.3 209 29.7
Manes.16G006300 Manihot esculenta HOM05D001191 ORTHO05D000979 4.8e-07 58.9 205 28.8
CiPaw.09G092700 Carya illinoinensis HOM05D001191 ORTHO05D000979 6.3e-07 58.5 205 27.3
Potri.004G013500 Populus trichocarpa HOM05D001191 ORTHO05D000979 6.3e-07 58.5 213 30.0
TWI38G0086 Tripterygium wilfordii HOM05D001191 ORTHO05D000979 6.3e-07 58.5 209 30.6
Cpa.g.sc152.21 Carica papaya HOM05D001191 ORTHO05D000979 8.2e-07 58.2 205 29.8
Thhalv10023357m.g Eutrema salsugineum HOM05D001191 ORTHO05D000979 8.2e-07 58.2 209 28.7
FvH4_3g01950 Fragaria vesca HOM05D001191 ORTHO05D000979 8.2e-07 58.2 213 29.6
Prupe.4G019600 Prunus persica HOM05D001191 ORTHO05D000979 8.2e-07 58.2 213 29.6
Sp2g02510 Schrenkiella parvula HOM05D001191 ORTHO05D000979 8.2e-07 58.2 209 28.7
Thecc.06G221900 Theobroma cacao HOM05D001191 ORTHO05D000979 8.2e-07 58.2 205 29.3
ClCG01G021930 Citrullus lanatus HOM05D001191 ORTHO05D000979 1.1e-06 57.8 205 27.8
FAN21G2981 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.1e-06 57.8 213 29.6
A03p67440 Brassica napus HOM05D001191 ORTHO05D000979 1.4e-06 57.4 209 29.2
BraA01t02731Z Brassica rapa HOM05D001191 ORTHO05D000979 1.4e-06 57.4 209 29.2
Cfa000213 Carpinus fangiana HOM05D001191 ORTHO05D000979 1.4e-06 57.4 209 27.3
CsaV3_6G049000 Cucumis sativus L. HOM05D001191 ORTHO05D000979 1.4e-06 57.4 205 27.8
Duzib235G0698 Durio zibethinus HOM05D001191 ORTHO05D000979 1.4e-06 57.4 205 29.3
Hma1.2p1_0749F.1_g212640 Hydrangea macrophylla HOM05D001191 ORTHO05D000979 1.4e-06 57.4 209 28.7
THA.LOC104809503 Tarenaya hassleriana HOM05D001191 ORTHO05D000979 1.4e-06 57.4 209 28.2
BcaC06g31878 Brassica carinata HOM05D001191 ORTHO05D000979 1.8e-06 57.0 209 29.2
Ciclev10014683m.g Citrus clementina HOM05D001191 ORTHO05D000979 1.8e-06 57.0 209 28.7
Haze_06808 Corylus avellana HOM05D001191 ORTHO05D000979 1.8e-06 57.0 209 27.3
FAN25G3711 Fragaria x ananassa HOM05D001191 ORTHO05D000979 1.8e-06 57.0 209 29.7
Gohir.A06G148500 Gossypium hirsutum HOM05D001191 ORTHO05D000979 2.4e-06 56.6 205 28.8
Gorai.010G180500 Gossypium raimondii HOM05D001191 ORTHO05D000979 2.4e-06 56.6 205 28.8
MELO3C007395.2 Cucumis melo HOM05D001191 ORTHO05D000979 3.1e-06 56.2 205 27.3
BcaC02g10513 Brassica carinata HOM05D001191 ORTHO05D000979 4.1e-06 55.8 209 28.7
C04p28050 Brassica napus HOM05D001191 ORTHO05D000979 4.1e-06 55.8 209 28.7
BolC4t24349H Brassica oleracea HOM05D001191 ORTHO05D000979 4.1e-06 55.8 209 28.7
MD10G1322300 Malus domestica HOM05D001191 ORTHO05D000979 4.1e-06 55.8 213 29.6
QL05p073028 Quercus lobata HOM05D001191 ORTHO05D000979 4.1e-06 55.8 213 27.2
Sed0017375 Sechium edule HOM05D001191 ORTHO05D000979 4.1e-06 55.8 205 28.3
AL2G13850 Arabidopsis lyrata HOM05D001191 ORTHO05D000979 5.3e-06 55.5 209 27.8
AT1G62050 Arabidopsis thaliana HOM05D001191 ORTHO05D000979 5.3e-06 55.5 209 27.8
arahy.Tifrunner.gnm1.ann1.52W6Q5 Arachis hypogaea HOM05D001191 ORTHO05D000979 5.3e-06 55.5 209 27.3
Carub.0002s0296 Capsella rubella HOM05D001191 ORTHO05D000979 5.3e-06 55.5 209 27.8
MD05G1347900 Malus domestica HOM05D001191 ORTHO05D000979 9.0e-06 54.7 213 28.2
Medtr2g023450 Medicago truncatula HOM05D001191 ORTHO05D000979 9.0e-06 54.7 213 30.5
vmacro23208 Vaccinium macrocarpon HOM05D001191 ORTHO05D000979 9.0e-06 54.7 43 65.1


User provided reference genes

Program Settings