Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 6.5e-183 644.0 353 100.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 1.8e-116 423.3 300 73.0
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 4.5e-107 392.1 298 67.1
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 1.7e-106 390.2 298 66.1
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.7e-106 390.2 308 65.6
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 2.9e-106 389.4 296 66.6
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 7.1e-105 384.8 308 64.9
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.1e-104 383.3 301 67.8
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 4.6e-104 382.1 304 64.8
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 7.9e-104 381.3 301 66.4
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 6.7e-103 378.3 300 64.7
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.5e-102 377.1 298 65.8
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 1.9e-102 376.7 300 64.3
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 7.4e-102 374.8 300 64.3
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.3e-101 374.0 304 63.5
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.3e-101 374.0 308 64.9
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.3e-101 374.0 304 65.1
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 1.6e-101 373.6 298 64.4
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.1e-101 373.2 300 64.3
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 4.8e-101 372.1 291 66.7
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 1.1e-100 370.9 299 65.6
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 1.4e-100 370.5 300 66.0
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 1.8e-100 370.2 311 61.4
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 1.8e-100 370.2 304 63.5
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 2.4e-100 369.8 298 64.4
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 2.4e-100 369.8 300 63.7
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 4.0e-100 369.0 304 62.8
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 6.9e-100 368.2 311 61.4
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 6.9e-100 368.2 311 61.4
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 9.0e-100 367.9 304 64.1
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.2e-99 367.5 300 62.7
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 7.6e-99 364.8 291 63.9
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 3.8e-98 362.5 297 65.0
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 4.9e-98 362.1 299 62.9
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 8.4e-98 361.3 298 63.1
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 1.1e-97 360.9 310 62.3
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 9.3e-97 357.8 303 63.0
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.6e-96 357.1 298 63.4
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.3e-95 354.0 299 62.2
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 6.7e-95 351.7 274 65.7
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 6.7e-95 351.7 308 61.4
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 8.7e-95 351.3 298 62.4
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.8e-93 346.3 297 61.6
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 2.8e-93 346.3 284 65.5
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 6.3e-93 345.1 285 62.5
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 6.3e-93 345.1 300 60.3
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 6.3e-93 345.1 299 60.5
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.8e-92 343.6 299 60.5
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 3.1e-92 342.8 251 70.1
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 1.2e-91 340.9 304 59.9
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 2.0e-91 340.1 284 62.7
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 7.6e-91 338.2 338 56.2
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.3e-90 337.4 297 59.3
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 1.1e-89 334.3 275 64.0
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 1.4e-89 334.0 303 59.4
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.4e-89 334.0 284 60.6
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 2.7e-88 329.7 303 58.1
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 8.7e-87 324.7 265 63.0
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 2.5e-86 323.2 297 59.6
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.5e-86 323.2 312 56.4
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 4.3e-86 322.4 311 56.3
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 1.6e-85 320.5 301 59.1
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 2.2e-85 320.1 288 58.7
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 2.8e-85 319.7 269 63.2
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 3.7e-85 319.3 273 60.8
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 4.8e-85 318.9 253 66.8
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 1.4e-84 317.4 293 58.4
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 5.3e-84 315.5 299 55.9
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 5.3e-84 315.5 295 58.6
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 6.9e-84 315.1 285 58.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 1.5e-83 313.9 312 55.4
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.5e-83 313.9 283 58.0
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 2.6e-83 313.2 292 57.5
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 5.9e-83 312.0 292 57.5
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 5.9e-83 312.0 292 57.5
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 7.7e-83 311.6 301 56.1
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.7e-82 310.5 300 54.3
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 1.7e-82 310.5 292 57.2
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 5.0e-82 308.9 264 59.8
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 5.0e-82 308.9 264 59.8
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 6.5e-82 308.5 297 56.9
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 6.5e-82 308.5 293 57.3
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 8.5e-82 308.1 312 54.2
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 8.5e-82 308.1 291 56.4
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.4e-81 307.4 292 57.2
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 2.5e-81 306.6 265 61.5
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 4.2e-81 305.8 281 58.0
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 4.2e-81 305.8 304 54.6
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 9.4e-81 304.7 271 59.4
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 1.0e-79 301.2 227 66.5
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 3.0e-79 299.7 294 55.1
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.1e-79 298.9 282 55.3
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 3.3e-78 296.2 282 55.0
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 4.4e-78 295.8 284 56.3
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 4.4e-78 295.8 224 67.4
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 6.3e-77 292.0 293 54.9
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.8e-76 290.4 222 65.8
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 1.5e-75 287.3 229 60.7
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 1.5e-75 287.3 268 59.7
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 2.6e-75 286.6 226 64.6
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 5.9e-75 285.4 282 53.5
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.9e-74 283.1 297 51.9
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 6.5e-74 282.0 296 53.0
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 1.1e-73 281.2 285 54.0
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 3.1e-68 263.1 229 59.8
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 6.3e-61 238.8 245 50.6
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 8.2e-61 238.4 183 66.1
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 8.2e-61 238.4 280 48.9
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 9.4e-57 224.9 299 41.5
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 3.6e-56 223.0 274 43.8
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 4.0e-55 219.5 270 44.4
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 3.4e-54 216.5 128 82.8
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 6.5e-50 202.2 103 89.3
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 1.6e-48 197.6 227 46.7
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 5.2e-47 192.6 287 41.8
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 7.5e-46 188.7 206 48.5
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 2.0e-43 180.6 280 40.4
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 7.8e-43 178.7 307 37.5
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 2.3e-31 140.6 79 77.2
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 1.2e-30 138.3 69 87.0
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 1.9e-25 120.9 197 42.1
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 7.6e-14 82.4 58 63.8
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 1.6e-08 64.7 133 29.3
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 2.1e-08 64.3 43 72.1
Cpa.g.c30633.1 Carica papaya HOM05D005712 ORTHO05D120172 2.8e-08 63.9 61 57.4


User provided reference genes

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