Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C46T20 Lonicera japonica HOM05D007639 ORTHO05D009509 5.6e-65 253.4 295 100.0
Dinv39377 Davidia involucrata HOM05D007639 ORTHO05D009509 1.8e-23 115.5 84 65.5
Cfa018449 Carpinus fangiana HOM05D007639 ORTHO05D009509 2.5e-20 105.1 87 57.5
Manes.05G164100 Manihot esculenta HOM05D007639 ORTHO05D009509 3.2e-20 104.8 87 57.5
GSVIVG01009638001 Vitis vinifera HOM05D007639 ORTHO05D009509 7.9e-19 100.1 83 57.8
TWI60G0667 Tripterygium wilfordii HOM05D007639 ORTHO05D009509 5.1e-18 97.4 87 55.2
DCAR_008778 Daucus carota HOM05D007639 ORTHO05D009509 6.7e-18 97.1 88 55.7
QL09p028535 Quercus lobata HOM05D007639 ORTHO05D009509 8.8e-18 96.7 87 52.9
Potri.014G040200 Populus trichocarpa HOM05D007639 ORTHO05D009509 2.0e-17 95.5 83 56.6
TAR625G1528 Trochodendron aralioides HOM05D007639 ORTHO05D009509 3.3e-17 94.7 83 53.0
Haze_17619 Corylus avellana HOM05D007639 ORTHO05D009509 5.7e-17 94.0 83 55.4
ECA234G3464 Erigeron canadensis HOM05D007639 ORTHO05D009509 2.8e-16 91.7 79 57.0
Duzib093G1018 Durio zibethinus HOM05D007639 ORTHO05D009509 3.7e-16 91.3 87 56.3
CSS0026781 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 8.2e-16 90.1 55 70.9
Lj6g0022088 Lotus japonicus HOM05D007639 ORTHO05D009509 1.8e-15 89.0 88 44.3
Cpa.g.sc207.2 Carica papaya HOM05D007639 ORTHO05D009509 3.1e-15 88.2 84 51.2
CAN.G371.124 Capsicum annuum HOM05D007639 ORTHO05D009509 5.3e-15 87.4 87 49.4
CAN.G371.126 Capsicum annuum HOM05D007639 ORTHO05D009509 5.3e-15 87.4 87 49.4
Prupe.1G585600 Prunus persica HOM05D007639 ORTHO05D009509 9.1e-15 86.7 87 47.1
Nn4g24966 Nelumbo nucifera HOM05D007639 ORTHO05D009509 1.2e-14 86.3 84 48.8
Oeu009601.2 Olea europaea HOM05D007639 ORTHO05D009509 1.2e-14 86.3 86 51.2
AUR62034326 Chenopodium quinoa HOM05D007639 ORTHO05D009509 2.6e-14 85.1 52 75.0
AUR62022372 Chenopodium quinoa HOM05D007639 ORTHO05D009509 3.4e-14 84.7 50 78.0
HanXRQChr17g0557061 Helianthus annuus HOM05D007639 ORTHO05D009509 3.4e-14 84.7 91 49.5
CiPaw.15G071600 Carya illinoinensis HOM05D007639 ORTHO05D009509 4.5e-14 84.3 80 51.2
Atru.BG.247.p Acer truncatum HOM05D007639 ORTHO05D009509 7.7e-14 83.6 53 69.8
SalBow7G0144 Salvia bowleyana HOM05D007639 ORTHO05D009509 7.7e-14 83.6 82 47.6
SalBow7G4426 Salvia bowleyana HOM05D007639 ORTHO05D009509 7.7e-14 83.6 82 47.6
Thecc.08G021400 Theobroma cacao HOM05D007639 ORTHO05D009509 7.7e-14 83.6 78 56.4
CSS0043455 Camellia sinensis var. sinensis HOM05D007639 ORTHO05D009509 1.0e-13 83.2 51 70.6
Gorai.009G205400 Gossypium raimondii HOM05D007639 ORTHO05D009509 1.0e-13 83.2 87 48.3
Gohir.D05G200100 Gossypium hirsutum HOM05D007639 ORTHO05D009509 1.7e-13 82.4 87 48.3
Lalb_Chr23g0275911 Lupinus albus HOM05D007639 ORTHO05D009509 1.7e-13 82.4 88 44.3
Peaxi162Scf00057g00149 Petunia axillaris HOM05D000909 ORTHO05D009509 1.7e-13 82.4 54 66.7
Sopen04g033420 Solanum pennellii HOM05D007639 ORTHO05D009509 1.7e-13 82.4 87 49.4
Nitab4.5_0000110g0140 Nicotiana tabacum HOM05D007639 ORTHO05D009509 2.2e-13 82.0 83 50.6
COL.COLO4_26382 Corchorus olitorius HOM05D007639 ORTHO05D009509 2.9e-13 81.6 84 50.0
Phvul.009G213300 Phaseolus vulgaris HOM05D007639 ORTHO05D009509 3.8e-13 81.3 88 43.2
Solyc04g079850.2 Solanum lycopersicum HOM05D007639 ORTHO05D009509 3.8e-13 81.3 87 48.3
Gohir.A05G197000 Gossypium hirsutum HOM05D007639 ORTHO05D009509 6.5e-13 80.5 87 47.1
Nitab4.5_0006518g0030 Nicotiana tabacum HOM05D007639 ORTHO05D009509 6.5e-13 80.5 83 49.4
Glyma.15G197000 Glycine max HOM05D007639 ORTHO05D009509 8.5e-13 80.1 88 42.0
AL1G31880 Arabidopsis lyrata HOM05D007639 ORTHO05D009509 1.1e-12 79.7 49 71.4
Cc10_g03430 Coffea canephora HOM05D007639 ORTHO05D009509 1.1e-12 79.7 55 65.5
BcaC07g38995 Brassica carinata HOM05D007639 ORTHO05D009509 1.9e-12 79.0 50 70.0
BolC8t49556H Brassica oleracea HOM05D007639 ORTHO05D009509 1.9e-12 79.0 50 70.0
RcHm_v2.0_Chr6g0300361 Rosa chinensis HOM05D007639 ORTHO05D009509 1.9e-12 79.0 51 70.6
Ca_02594_v3 Cicer arietinum L. HOM05D007639 ORTHO05D009509 2.5e-12 78.6 84 42.9
Lsat_1_v5_gn_4_37641 Lactuca sativa HOM05D007639 ORTHO05D009509 2.5e-12 78.6 78 47.4
SHI25578 Sapria himalayana HOM05D007639 ORTHO05D009509 2.5e-12 78.6 46 76.1
THA.LOC104813851 Tarenaya hassleriana HOM05D007639 ORTHO05D009509 2.5e-12 78.6 80 46.2
MELO3C003888.2 Cucumis melo HOM05D007639 ORTHO05D009509 3.2e-12 78.2 49 75.5
Migut.L00762 Erythranthe guttata HOM05D007639 ORTHO05D009509 3.2e-12 78.2 88 42.0
FvH4_2g40380 Fragaria vesca HOM05D007639 ORTHO05D009509 3.2e-12 78.2 80 51.2
MD15G1444300 Malus domestica HOM05D007639 ORTHO05D009509 3.2e-12 78.2 49 71.4
SGA_v2.0_scaffold24G10272 Striga asiatica HOM05D007639 ORTHO05D009509 3.2e-12 78.2 85 43.5
A08p29890 Brassica napus HOM05D007639 ORTHO05D009509 4.2e-12 77.8 50 68.0
BraA08t34924Z Brassica rapa HOM05D007639 ORTHO05D009509 4.2e-12 77.8 50 68.0
Ciclev10003562m.g Citrus clementina HOM05D007639 ORTHO05D009509 4.2e-12 77.8 49 69.4
Thhalv10006776m.g Eutrema salsugineum HOM05D007639 ORTHO05D009509 4.2e-12 77.8 49 71.4
Glyma.09G089200 Glycine max HOM05D007639 ORTHO05D009509 4.2e-12 77.8 82 42.7
Psat1g020640 Pisum sativum HOM05D007639 ORTHO05D009509 5.5e-12 77.4 86 45.3
Carub.0001s1888 Capsella rubella HOM05D007639 ORTHO05D009509 7.2e-12 77.0 46 76.1
AT1G19290 Arabidopsis thaliana HOM05D007639 ORTHO05D009509 9.4e-12 76.6 49 67.3
CsaV3_3G044860 Cucumis sativus L. HOM05D007639 ORTHO05D009509 9.4e-12 76.6 49 73.5
vmacro04826 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 1.6e-11 75.9 54 64.8
vmacro04988 Vaccinium macrocarpon HOM05D007639 ORTHO05D009509 1.6e-11 75.9 54 64.8
VMungo1309G2587 Vigna mungo HOM05D007639 ORTHO05D009509 1.6e-11 75.9 88 40.9
MSTRG.1303 Avicennia marina HOM05D007639 ORTHO05D009509 2.1e-11 75.5 86 43.0
C08p19350 Brassica napus HOM05D007639 ORTHO05D009509 2.1e-11 75.5 50 66.0
PSO541G4055 Papaver somniferum HOM05D007639 ORTHO05D009509 2.1e-11 75.5 84 52.4
ClCG05G019220 Citrullus lanatus HOM05D007639 ORTHO05D009509 2.7e-11 75.1 47 76.6
Aa31LG7G3990 Aethionema arabicum HOM05D007639 ORTHO05D009509 3.6e-11 74.7 47 72.3
Aqoxy6G01002 Aquilegia oxysepala HOM05D007639 ORTHO05D009509 4.7e-11 74.3 77 45.5
PSO675G4860 Papaver somniferum HOM05D007639 ORTHO05D009509 4.7e-11 74.3 84 51.2
Ah.04g165440 Amaranthus hybridus HOM05D007639 ORTHO05D009509 6.1e-11 73.9 52 63.5
Sp1g17190 Schrenkiella parvula HOM05D007639 ORTHO05D009509 6.1e-11 73.9 49 67.3
Psat3g180320 Pisum sativum HOM05D007639 ORTHO05D009509 8.0e-11 73.6 89 43.8
HPP92_006134 Vanilla planifolia HOM05D007639 ORTHO05D009509 8.0e-11 73.6 87 41.4
CARHR019880 Cardamine hirsuta HOM05D007639 ORTHO05D009509 1.0e-10 73.2 91 49.5
MBI16_g10987_MAGBIO Magnolia biondii HOM05D007639 ORTHO05D009509 1.8e-10 72.4 74 45.9
Medtr2g049740 Medicago truncatula HOM05D007639 ORTHO05D009509 1.8e-10 72.4 89 42.7
Sed0007352 Sechium edule HOM05D007639 ORTHO05D009509 1.8e-10 72.4 47 74.5
TPR.G34687 Trifolium pratense HOM05D007639 ORTHO05D009509 1.8e-10 72.4 81 45.7
BcaB03g12921 Brassica carinata HOM05D007639 ORTHO05D009509 8.8e-10 70.1 50 64.0
Psat3g155040 Pisum sativum HOM05D000871 ORTHO05D000770 2.0e-09 68.9 86 41.9
Sc15g0006760 Simmondsia chinensis HOM05D007639 ORTHO05D009509 4.4e-09 67.8 92 37.0
PGR031G3090 Punica granatum HOM05D007639 ORTHO05D009509 1.3e-08 66.2 49 65.3
ATR0733G078 Amborella trichopoda HOM05D007639 ORTHO05D009509 1.7e-08 65.9 54 51.9
Eucgr.A00484 Eucalyptus grandis HOM05D007639 ORTHO05D009509 3.7e-08 64.7 43 65.1
CDE04G3788 Ceratophyllum demersum HOM05D007639 ORTHO05D009509 8.2e-08 63.5 54 51.9
Sabra14G0029300 Salix brachista HOM05D007639 ORTHO05D009509 1.2e-06 59.7 42 61.9


User provided reference genes

Program Settings