Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C291G3 Lonicera japonica HOM05D004042 ORTHO05D004552 1.1e-160 570.1 314 100.0
Haze_25938 Corylus avellana HOM05D004042 ORTHO05D004552 2.0e-74 283.5 335 54.9
Cfa003057 Carpinus fangiana HOM05D004042 ORTHO05D004552 2.6e-74 283.1 339 54.6
Dinv36786 Davidia involucrata HOM05D004042 ORTHO05D004552 2.2e-73 280.0 324 54.0
TAR624G0704 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.2e-73 280.0 306 54.6
TAR636G2477 Trochodendron aralioides HOM05D004042 ORTHO05D004552 2.2e-73 280.0 308 55.5
GSVIVG01015174001 Vitis vinifera HOM05D004042 ORTHO05D004552 3.7e-73 279.3 291 57.7
Lj7C679G4 Lonicera japonica HOM05D004042 ORTHO05D004552 1.9e-72 276.9 324 55.2
Migut.J00573 Erythranthe guttata HOM05D004042 ORTHO05D004552 2.4e-72 276.6 338 53.3
Rhsim05G0016600 Rhododendron simsii HOM05D004042 ORTHO05D004552 4.1e-72 275.8 308 56.2
ClCG11G001680 Citrullus lanatus HOM05D004042 ORTHO05D004552 7.1e-72 275.0 237 64.1
Glyma.13G106100 Glycine max HOM05D004042 ORTHO05D004552 1.2e-71 274.2 237 63.7
Prupe.7G206100 Prunus persica HOM05D004042 ORTHO05D004552 2.7e-71 273.1 237 63.7
SGA_v2.0_scaffold91G28060 Striga asiatica HOM05D004042 ORTHO05D004552 6.0e-71 271.9 328 52.4
QL02p062121 Quercus lobata HOM05D004042 ORTHO05D004552 7.8e-71 271.6 237 65.0
TWI32G1194 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 6.6e-70 268.5 237 62.9
Oeu054835.1 Olea europaea HOM05D004042 ORTHO05D004552 8.6e-70 268.1 330 53.0
CANSAT56G0725 Cannabis sativa HOM05D004042 ORTHO05D004552 1.1e-69 267.7 332 50.3
MSTRG.19492 Avicennia marina HOM05D004042 ORTHO05D004552 1.5e-69 267.3 312 52.9
Eucgr.C03419 Eucalyptus grandis HOM05D004042 ORTHO05D004552 1.5e-69 267.3 239 63.2
TWI63G1034 Tripterygium wilfordii HOM05D004042 ORTHO05D004552 1.5e-69 267.3 237 63.3
Glyma.17G053300 Glycine max HOM05D004042 ORTHO05D004552 1.9e-69 266.9 237 62.4
Ciclev10008048m.g Citrus clementina HOM05D004042 ORTHO05D004552 2.5e-69 266.5 237 63.3
CiPaw.03G212500 Carya illinoinensis HOM05D004042 ORTHO05D004552 3.3e-69 266.2 328 51.8
MD15G1210700 Malus domestica HOM05D004042 ORTHO05D004552 3.3e-69 266.2 329 50.5
VMungo1215G0315 Vigna mungo HOM05D004042 ORTHO05D004552 4.3e-69 265.8 236 62.7
Cc06_g11620 Coffea canephora HOM05D004042 ORTHO05D004552 5.6e-69 265.4 238 62.6
MELO3C004632.2 Cucumis melo HOM05D004042 ORTHO05D004552 5.6e-69 265.4 237 62.4
MD02G1082600 Malus domestica HOM05D004042 ORTHO05D004552 5.6e-69 265.4 305 53.1
Oeu032802.1 Olea europaea HOM05D004042 ORTHO05D004552 5.6e-69 265.4 323 52.0
Phvul.003G134900 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 5.6e-69 265.4 237 61.6
Psat7g044040 Pisum sativum HOM05D004042 ORTHO05D004552 7.3e-69 265.0 237 61.6
CsaV3_2G001380 Cucumis sativus L. HOM05D004042 ORTHO05D004552 9.6e-69 264.6 237 62.9
Lj4g0002498 Lotus japonicus HOM05D004042 ORTHO05D004552 9.6e-69 264.6 239 62.8
Ca_21290_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.2e-68 264.2 307 51.8
Oeu051295.1 Olea europaea HOM05D004042 ORTHO05D004552 1.6e-68 263.8 315 54.3
Lj6g0011849 Lotus japonicus HOM05D004042 ORTHO05D004552 2.1e-68 263.5 242 61.2
Manes.16G100000 Manihot esculenta HOM05D004042 ORTHO05D004552 3.6e-68 262.7 242 59.9
Medtr4g125980 Medicago truncatula HOM05D004042 ORTHO05D004552 4.7e-68 262.3 237 61.6
Peaxi162Scf00494g00077 Petunia axillaris HOM05D004042 ORTHO05D004552 6.2e-68 261.9 242 60.7
Actinidia25240 Actinidia chinensis HOM05D004042 ORTHO05D004552 4.0e-67 259.2 323 50.8
Glyma.09G065300 Glycine max HOM05D004042 ORTHO05D004552 4.0e-67 259.2 236 61.4
Aqoxy7G01162 Aquilegia oxysepala HOM05D004042 ORTHO05D004552 8.9e-67 258.1 238 60.1
Atru.chr7.1627 Acer truncatum HOM05D004042 ORTHO05D004552 1.2e-66 257.7 313 52.7
CiPaw.04G147900 Carya illinoinensis HOM05D004042 ORTHO05D004552 1.2e-66 257.7 286 54.5
RcHm_v2.0_Chr2g0093781 Rosa chinensis HOM05D004042 ORTHO05D004552 1.5e-66 257.3 338 50.3
TPR.G9438 Trifolium pratense HOM05D004042 ORTHO05D004552 1.5e-66 257.3 237 60.8
VMungo1309G0638 Vigna mungo HOM05D004042 ORTHO05D004552 1.5e-66 257.3 235 61.3
Sed0015499 Sechium edule HOM05D004042 ORTHO05D004552 2.6e-66 256.5 238 60.5
SalBow6G0873 Salvia bowleyana HOM05D004042 ORTHO05D004552 5.8e-66 255.4 323 52.0
PSO832G2139 Papaver somniferum HOM05D004042 ORTHO05D004552 1.3e-65 254.2 326 50.0
Solyc07g040740.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 1.3e-65 254.2 238 60.1
Sopen07g019480 Solanum pennellii HOM05D004042 ORTHO05D004552 1.7e-65 253.8 238 60.1
Phvul.009G230700 Phaseolus vulgaris HOM05D004042 ORTHO05D004552 2.2e-65 253.4 235 59.1
DCAR_028272 Daucus carota HOM05D004042 ORTHO05D004552 2.9e-65 253.1 244 59.4
Psat1g132200 Pisum sativum HOM05D004042 ORTHO05D004552 3.8e-65 252.7 245 58.0
THA.LOC104814629 Tarenaya hassleriana HOM05D004042 ORTHO05D004552 4.9e-65 252.3 310 51.3
PSO063G3240 Papaver somniferum HOM05D004042 ORTHO05D004552 6.4e-65 251.9 237 59.9
PGR142G2341 Punica granatum HOM05D004042 ORTHO05D004552 6.4e-65 251.9 312 51.0
TPR.G29533 Trifolium pratense HOM05D004042 ORTHO05D004552 8.4e-65 251.5 239 59.4
Sabra06G0116600 Salix brachista HOM05D004042 ORTHO05D004552 1.1e-64 251.1 246 59.8
vmacro17139 Vaccinium macrocarpon HOM05D004042 ORTHO05D004552 1.1e-64 251.1 339 49.9
Dinv42339 Davidia involucrata HOM05D004042 ORTHO05D004552 3.2e-64 249.6 324 50.0
Nn6g35535 Nelumbo nucifera HOM05D004042 ORTHO05D004552 5.4e-64 248.8 309 51.1
FvH4_1g07910 Fragaria vesca HOM05D004042 ORTHO05D004552 9.3e-64 248.1 237 60.8
Manes.03G036000 Manihot esculenta HOM05D004042 ORTHO05D004552 9.3e-64 248.1 327 47.7
Nitab4.5_0009216g0010 Nicotiana tabacum HOM05D004042 ORTHO05D004552 9.3e-64 248.1 308 51.0
Medtr2g039940 Medicago truncatula HOM05D004042 ORTHO05D004552 1.2e-63 247.7 237 59.5
Nitab4.5_0001519g0080 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.6e-63 247.3 311 49.5
PGSC0003DMG400000274 Solanum tuberosum HOM05D004042 ORTHO05D004552 3.5e-63 246.1 237 59.9
Nitab4.5_0002824g0090 Nicotiana tabacum HOM05D004042 ORTHO05D004552 4.6e-63 245.7 286 52.4
Lalb_Chr08g0232371 Lupinus albus HOM05D004042 ORTHO05D004552 6.0e-63 245.4 235 59.6
Lalb_Chr13g0299591 Lupinus albus HOM05D004042 ORTHO05D004552 6.0e-63 245.4 236 57.6
CAN.G57.12 Capsicum annuum HOM05D004042 ORTHO05D004552 1.3e-62 244.2 275 53.1
AUR62029034 Chenopodium quinoa HOM05D004042 ORTHO05D004552 1.3e-62 244.2 328 47.6
Potri.018G066100 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.3e-62 244.2 243 58.8
FAN26G3195 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.3e-62 243.4 316 51.9
FAN23G0463 Fragaria x ananassa HOM05D004042 ORTHO05D004552 3.9e-62 242.7 320 50.6
Sabra18G0058600 Salix brachista HOM05D004042 ORTHO05D004552 8.7e-62 241.5 246 58.1
FAN26G0253 Fragaria x ananassa HOM05D004042 ORTHO05D004552 1.5e-61 240.7 316 51.6
Potri.006G147600 Populus trichocarpa HOM05D004042 ORTHO05D004552 1.5e-61 240.7 246 57.3
C09p14580 Brassica napus HOM05D004042 ORTHO05D004552 3.3e-61 239.6 240 57.5
BraA09t36880Z Brassica rapa HOM05D004042 ORTHO05D004552 3.3e-61 239.6 240 57.5
CDE05G1317 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 4.3e-61 239.2 233 57.1
Sopen12g003900 Solanum pennellii HOM05D004042 ORTHO05D004552 4.3e-61 239.2 319 49.5
Thhalv10022645m.g Eutrema salsugineum HOM05D004042 ORTHO05D004552 5.6e-61 238.8 242 57.0
Sc08g0008580 Simmondsia chinensis HOM05D004042 ORTHO05D004552 5.6e-61 238.8 244 57.4
Solyc12g008970.3 Solanum lycopersicum HOM05D004042 ORTHO05D004552 5.6e-61 238.8 307 49.8
AL3G48800 Arabidopsis lyrata HOM05D004042 ORTHO05D004552 7.3e-61 238.4 236 58.1
AT2G19450 Arabidopsis thaliana HOM05D004042 ORTHO05D004552 7.3e-61 238.4 236 58.1
BcaC04g22852 Brassica carinata HOM05D004042 ORTHO05D004552 7.3e-61 238.4 328 49.7
BolC9t54364H Brassica oleracea HOM05D004042 ORTHO05D004552 7.3e-61 238.4 328 49.7
FAN19G1831 Fragaria x ananassa HOM05D004042 ORTHO05D004552 9.6e-61 238.0 321 49.5
HanXRQChr03g0060291 Helianthus annuus HOM05D004042 ORTHO05D004552 9.6e-61 238.0 236 56.4
Sp3g32820 Schrenkiella parvula HOM05D004042 ORTHO05D004552 1.6e-60 237.3 336 47.6
FAN28G1686 Fragaria x ananassa HOM05D004042 ORTHO05D004552 2.1e-60 236.9 323 49.8
BcaC06g36576 Brassica carinata HOM05D004042 ORTHO05D004552 3.6e-60 236.1 313 49.5
CDE05G1467 Ceratophyllum demersum HOM05D004042 ORTHO05D004552 4.8e-60 235.7 233 57.1
C07p02710 Brassica napus HOM05D004042 ORTHO05D004552 8.1e-60 235.0 325 48.6
BolC7t40671H Brassica oleracea HOM05D004042 ORTHO05D004552 8.1e-60 235.0 325 48.6
A09p12360 Brassica napus HOM05D004042 ORTHO05D004552 1.1e-59 234.6 316 49.1
Aa31LG8G16450 Aethionema arabicum HOM05D004042 ORTHO05D004552 1.4e-59 234.2 326 50.9
arahy.Tifrunner.gnm1.ann1.5W0QMQ Arachis hypogaea HOM05D004042 ORTHO05D004552 1.4e-59 234.2 235 54.5
Ca_13125_v3 Cicer arietinum L. HOM05D004042 ORTHO05D004552 1.4e-59 234.2 245 55.5
CARHR109890 Cardamine hirsuta HOM05D004042 ORTHO05D004552 1.8e-59 233.8 236 57.2
HanXRQChr12g0354671 Helianthus annuus HOM05D004042 ORTHO05D004552 1.8e-59 233.8 278 51.4
Thecc.09G085400 Theobroma cacao HOM05D004042 ORTHO05D004552 1.8e-59 233.8 331 48.0
HPP92_005224 Vanilla planifolia HOM05D004042 ORTHO05D004552 1.8e-59 233.8 341 46.3
ATR0789G051 Amborella trichopoda HOM05D004042 ORTHO05D004552 2.4e-59 233.4 234 56.4
A07p01320 Brassica napus HOM05D004042 ORTHO05D004552 3.1e-59 233.0 328 47.9
BraA07t27923Z Brassica rapa HOM05D004042 ORTHO05D004552 3.1e-59 233.0 328 47.9
HanXRQChr10g0319461 Helianthus annuus HOM05D004042 ORTHO05D004552 3.1e-59 233.0 283 49.5
BcaB07g31608 Brassica carinata HOM05D004042 ORTHO05D004552 5.3e-59 232.3 323 48.9
Carub.0003s3373 Capsella rubella HOM05D004042 ORTHO05D004552 5.3e-59 232.3 316 48.4
ECA234G2403 Erigeron canadensis HOM05D004042 ORTHO05D004552 5.3e-59 232.3 236 56.4
arahy.Tifrunner.gnm1.ann1.W5L64F Arachis hypogaea HOM05D004042 ORTHO05D004552 6.9e-59 231.9 235 54.0
BcaB03g16730 Brassica carinata HOM05D004042 ORTHO05D004552 6.9e-59 231.9 315 48.9
Gohir.D07G012400 Gossypium hirsutum HOM05D004042 ORTHO05D004552 9.0e-59 231.5 237 56.5
Gorai.001G013100 Gossypium raimondii HOM05D004042 ORTHO05D004552 9.0e-59 231.5 237 56.5
PSO210G6497 Papaver somniferum HOM05D004042 ORTHO05D004552 1.2e-58 231.1 237 57.8
Lsat_1_v5_gn_5_143061 Lactuca sativa HOM05D004042 ORTHO05D004552 2.0e-58 230.3 284 50.4
PSO210G1704 Papaver somniferum HOM05D004042 ORTHO05D004552 2.6e-58 229.9 241 56.8
Hund25994 Selenicereus undatus HOM05D004042 ORTHO05D004552 3.4e-58 229.6 237 55.3
Zm00001eb277490 Zea mays HOM05D004042 ORTHO05D004552 5.8e-58 228.8 234 54.3
Hund06663 Selenicereus undatus HOM05D004042 ORTHO05D004552 9.9e-58 228.0 282 49.6
Gohir.A07G012600 Gossypium hirsutum HOM05D004042 ORTHO05D004552 2.2e-57 226.9 237 55.7
EL10Ac8g19178 Beta vulgaris HOM05D004042 ORTHO05D004552 3.8e-57 226.1 275 50.9
Os06g0563900 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 3.2e-56 223.0 234 54.3
Peaxi162Scf00498g00448 Petunia axillaris HOM05D004042 ORTHO05D004552 4.2e-56 222.6 235 57.0
arahy.Tifrunner.gnm1.ann1.MYU01D Arachis hypogaea HOM05D004042 ORTHO05D004552 7.1e-56 221.9 292 47.9
Sc18g0002260 Simmondsia chinensis HOM05D004042 ORTHO05D004552 1.3e-54 217.6 244 53.3
arahy.Tifrunner.gnm1.ann1.MZM9C8 Arachis hypogaea HOM05D004042 ORTHO05D004552 1.7e-54 217.2 304 46.1
Nitab4.5_0002642g0100 Nicotiana tabacum HOM05D004042 ORTHO05D004552 1.5e-53 214.2 210 57.6
Os05g0196800 Oryza sativa ssp. japonica HOM05D004042 ORTHO05D004552 1.9e-53 213.8 239 51.9
HPP92_003981 Vanilla planifolia HOM05D004042 ORTHO05D004552 5.6e-53 212.2 285 47.7
Zm00001eb284200 Zea mays HOM05D004042 ORTHO05D004552 5.6e-53 212.2 245 51.8
Lalb_Chr11g0074521 Lupinus albus HOM05D004042 ORTHO05D004552 1.6e-52 210.7 204 60.8
CSS0045629 Camellia sinensis var. sinensis HOM05D004042 ORTHO05D004552 9.9e-50 201.4 261 51.0
AagrBONN_evm.TU.Sc2ySwM_117.1233 Anthoceros agrestis HOM05D004042 ORTHO05D004552 9.3e-48 194.9 243 46.9
PGSC0003DMG400032788 Solanum tuberosum HOM05D004042 ORTHO05D004552 6.0e-47 192.2 319 43.3
Duzib168G0739 Durio zibethinus HOM05D004042 ORTHO05D004552 3.0e-46 189.9 316 44.6
Mapoly0012s0121 Marchantia polymorpha HOM05D004042 ORTHO05D004552 3.0e-46 189.9 238 45.0
AagrBONN_evm.TU.Sc2ySwM_344.3248 Anthoceros agrestis HOM05D004042 ORTHO05D004552 3.3e-45 186.4 243 44.9
SMO356G0470 Selaginella moellendorffii HOM05D004042 ORTHO05D004552 3.3e-45 186.4 229 49.8
CAN.G1583.6 Capsicum annuum HOM05D004042 ORTHO05D004552 9.6e-45 184.9 133 71.4
Pp3c15_23830 Physcomitrium patens HOM05D004042 ORTHO05D004552 2.1e-44 183.7 346 37.3
AUR62033935 Chenopodium quinoa HOM05D004042 ORTHO05D004552 3.7e-44 183.0 272 45.2
unitig_8.g4318 Utricularia gibba HOM05D004042 ORTHO05D004552 1.4e-43 181.0 199 55.8
AagrBONN_evm.TU.Sc2ySwM_344.1721 Anthoceros agrestis HOM05D004042 ORTHO05D004552 6.9e-43 178.7 243 44.0
DCAR_011961 Daucus carota HOM05D004042 ORTHO05D004552 1.0e-41 174.9 163 58.3
Hma1.2p1_0672F.1_g201023 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.9e-41 173.3 111 75.7
Hma1.2p1_0672F.1_g201026 Hydrangea macrophylla HOM05D004042 ORTHO05D004552 2.9e-41 173.3 111 75.7
Pp3c9_24440 Physcomitrium patens HOM05D004042 ORTHO05D004552 8.4e-41 171.8 246 43.9
COL.COLO4_18176 Corchorus olitorius HOM05D004042 ORTHO05D004552 3.9e-38 162.9 168 58.3
Cpa.g.sc737.3 Carica papaya HOM05D004042 ORTHO05D004552 5.3e-19 99.4 194 43.3
PRCOL_00002371 Prasinoderma coloniale HOM05D004042 ORTHO05D004552 9.1e-19 98.6 246 30.1
PSO339G6631 Papaver somniferum HOM05D002947 ORTHO05D037275 3.9e-14 83.2 117 45.3
PSO765G0232 Papaver somniferum HOM05D004042 ORTHO05D004552 2.2e-12 77.4 72 63.9
SEGI_28032 Sequoiadendron giganteum HOM05D004042 ORTHO05D004552 2.2e-12 77.4 63 54.0
PSO266G0038 Papaver somniferum HOM05D002947 ORTHO05D037275 5.0e-09 66.2 78 50.0


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