Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C240T7 Lonicera japonica HOM05D005976 ORTHO05D007149 9.1e-270 932.9 458 100.0
Dinv40218 Davidia involucrata HOM05D005976 ORTHO05D007149 1.1e-201 706.8 456 76.8
Actinidia28755 Actinidia chinensis HOM05D005976 ORTHO05D007149 1.6e-189 666.4 458 71.6
TAR381G0142 Trochodendron aralioides HOM05D005976 ORTHO05D007149 1.3e-186 656.8 462 68.8
Hma1.2p1_0085F.1_g044370 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 8.2e-186 654.1 453 71.3
DCAR_014120 Daucus carota HOM05D005976 ORTHO05D007149 1.7e-183 646.4 460 71.3
Peaxi162Scf00677g00223 Petunia axillaris HOM05D005976 ORTHO05D007149 2.9e-183 645.6 459 68.2
Nitab4.5_0011596g0010 Nicotiana tabacum HOM05D005976 ORTHO05D007149 3.2e-182 642.1 460 67.4
Cc07_g12200 Coffea canephora HOM05D005976 ORTHO05D007149 4.2e-182 641.7 454 70.0
Nitab4.5_0000855g0090 Nicotiana tabacum HOM05D005976 ORTHO05D007149 9.3e-182 640.6 460 67.4
PGSC0003DMG402013639 Solanum tuberosum HOM05D005976 ORTHO05D007149 5.1e-180 634.8 460 67.0
MD15G1228100 Malus domestica HOM05D005976 ORTHO05D007149 6.7e-180 634.4 455 68.6
Sopen02g026940 Solanum pennellii HOM05D005976 ORTHO05D007149 8.7e-180 634.0 460 67.0
Rhsim08G0025900 Rhododendron simsii HOM05D005976 ORTHO05D007149 1.9e-179 632.9 451 68.3
CAN.G1428.10 Capsicum annuum HOM05D005976 ORTHO05D007149 5.7e-179 631.3 452 67.5
Solyc02g082280.3 Solanum lycopersicum HOM05D005976 ORTHO05D007149 9.7e-179 630.6 460 66.5
Prupe.7G186800 Prunus persica HOM05D005976 ORTHO05D007149 2.2e-178 629.4 455 67.0
Atru.chr3.58 Acer truncatum HOM05D005976 ORTHO05D007149 4.8e-178 628.2 450 68.0
QL10p048872 Quercus lobata HOM05D005976 ORTHO05D007149 1.8e-177 626.3 459 67.3
ECA232G3572 Erigeron canadensis HOM05D005976 ORTHO05D007149 1.3e-175 620.2 449 68.4
vmacro18477 Vaccinium macrocarpon HOM05D005976 ORTHO05D007149 1.7e-175 619.8 452 67.3
Duzib147G1500 Durio zibethinus HOM05D005976 ORTHO05D007149 2.2e-175 619.4 461 65.3
Haze_03641 Corylus avellana HOM05D005976 ORTHO05D007149 1.1e-174 617.1 459 67.5
Gohir.D07G179000 Gossypium hirsutum HOM05D005976 ORTHO05D007149 3.2e-174 615.5 461 65.3
Gorai.001G200200 Gossypium raimondii HOM05D005976 ORTHO05D007149 3.2e-174 615.5 461 65.3
Cfa007111 Carpinus fangiana HOM05D005976 ORTHO05D007149 5.5e-174 614.8 459 66.4
Eucgr.I02203 Eucalyptus grandis HOM05D005976 ORTHO05D007149 5.5e-174 614.8 459 64.5
Thecc.01G002100 Theobroma cacao HOM05D005976 ORTHO05D007149 9.4e-174 614.0 461 65.7
Potri.011G144700 Populus trichocarpa HOM05D005976 ORTHO05D007149 1.6e-173 613.2 462 64.7
Lsat_1_v5_gn_8_114080 Lactuca sativa HOM05D005976 ORTHO05D007149 3.6e-173 612.1 449 68.6
COL.COLO4_25046 Corchorus olitorius HOM05D005976 ORTHO05D007149 7.9e-173 610.9 463 64.4
Gohir.A07G172300 Gossypium hirsutum HOM05D005976 ORTHO05D007149 1.4e-172 610.1 461 64.2
Manes.02G116600 Manihot esculenta HOM05D005976 ORTHO05D007149 1.8e-172 609.8 460 64.3
HanXRQChr09g0259071 Helianthus annuus HOM05D005976 ORTHO05D007149 2.3e-172 609.4 458 66.8
Cpa.g.sc365.8 Carica papaya HOM05D005976 ORTHO05D007149 5.1e-172 608.2 462 63.0
Sabra11G0129800 Salix brachista HOM05D005976 ORTHO05D007149 6.7e-172 607.8 462 64.5
MBI04_g31209_MAGBIO Magnolia biondii HOM05D005976 ORTHO05D007149 8.8e-172 607.4 459 64.9
Hma1.2p1_0085F.1_g044380 Hydrangea macrophylla HOM05D005976 ORTHO05D007149 1.1e-171 607.1 456 67.3
Ciclev10026942m.g Citrus clementina HOM05D005976 ORTHO05D007149 4.4e-171 605.1 454 64.8
Oeu021989.1 Olea europaea HOM05D005976 ORTHO05D007149 9.7e-171 604.0 459 66.0
Sc03g0004130 Simmondsia chinensis HOM05D005976 ORTHO05D007149 1.3e-170 603.6 455 64.0
FAN28G0094 Fragaria x ananassa HOM05D005976 ORTHO05D007149 1.7e-170 603.2 455 64.0
RcHm_v2.0_Chr2g0096791 Rosa chinensis HOM05D005976 ORTHO05D007149 2.2e-170 602.8 455 65.3
FvH4_1g10000 Fragaria vesca HOM05D005976 ORTHO05D007149 6.3e-170 601.3 455 64.0
FAN19G1634 Fragaria x ananassa HOM05D005976 ORTHO05D007149 1.8e-169 599.7 455 63.7
Nn6g31621 Nelumbo nucifera HOM05D005976 ORTHO05D007149 2.4e-169 599.4 462 64.3
Aqoxy6G02993 Aquilegia oxysepala HOM05D005976 ORTHO05D007149 6.9e-169 597.8 454 63.7
FAN26G2461 Fragaria x ananassa HOM05D005976 ORTHO05D007149 1.2e-168 597.0 455 63.5
PGR119G1871 Punica granatum HOM05D005976 ORTHO05D007149 5.9e-168 594.7 459 63.2
Ca_22438_v3 Cicer arietinum L. HOM05D005976 ORTHO05D007149 1.0e-167 594.0 455 62.9
FAN23G1414 Fragaria x ananassa HOM05D005976 ORTHO05D007149 1.7e-167 593.2 455 63.3
Psat4g106360 Pisum sativum HOM05D005976 ORTHO05D007149 2.9e-167 592.4 456 62.9
AUR62018030 Chenopodium quinoa HOM05D005976 ORTHO05D007149 5.0e-167 591.7 457 62.4
AUR62003719 Chenopodium quinoa HOM05D005976 ORTHO05D007149 6.5e-167 591.3 457 62.4
TWI73G0718 Tripterygium wilfordii HOM05D005976 ORTHO05D007149 8.5e-167 590.9 462 63.4
Ah.02g123200 Amaranthus hybridus HOM05D005976 ORTHO05D007149 1.6e-165 586.6 454 61.5
EL10Ac6g15029 Beta vulgaris HOM05D005976 ORTHO05D007149 2.7e-165 585.9 452 62.6
Medtr8g072710 Medicago truncatula HOM05D005976 ORTHO05D007149 3.6e-165 585.5 467 60.8
Hund19685 Selenicereus undatus HOM05D005976 ORTHO05D007149 3.6e-165 585.5 460 61.5
Glyma.16G112900 Glycine max HOM05D005976 ORTHO05D007149 1.4e-164 583.6 456 61.2
SalBow2G0432 Salvia bowleyana HOM05D005976 ORTHO05D007149 5.2e-164 581.6 448 63.8
Lalb_Chr16g0391711 Lupinus albus HOM05D005976 ORTHO05D007149 1.1e-163 580.5 454 60.8
Glyma.09G196100 Glycine max HOM05D005976 ORTHO05D007149 5.7e-163 578.2 454 61.2
PSO675G7053 Papaver somniferum HOM05D005976 ORTHO05D007149 2.8e-162 575.9 458 63.3
TPR.G27924 Trifolium pratense HOM05D005976 ORTHO05D007149 8.2e-162 574.3 473 59.0
MSTRG.18885 Avicennia marina HOM05D005976 ORTHO05D007149 4.1e-161 572.0 465 62.2
Lj4g0003913 Lotus japonicus HOM05D005976 ORTHO05D007149 4.1e-161 572.0 454 60.8
VMungo0251G2412 Vigna mungo HOM05D005976 ORTHO05D007149 2.0e-160 569.7 454 60.1
Phvul.003G271600 Phaseolus vulgaris HOM05D005976 ORTHO05D007149 1.3e-159 567.0 454 59.9
Aa31LG1G14470 Aethionema arabicum HOM05D005976 ORTHO05D007149 1.1e-158 563.9 451 61.9
MELO3C007982.2 Cucumis melo HOM05D005976 ORTHO05D007149 1.1e-158 563.9 449 62.6
Migut.D02574 Erythranthe guttata HOM05D005976 ORTHO05D007149 2.5e-158 562.8 452 62.6
ClCG01G020980 Citrullus lanatus HOM05D005976 ORTHO05D007149 3.2e-158 562.4 449 63.0
SGA_v2.0_scaffold6G03353 Striga asiatica HOM05D005976 ORTHO05D007149 7.2e-158 561.2 456 62.5
arahy.Tifrunner.gnm1.ann1.2S25M9 Arachis hypogaea HOM05D005976 ORTHO05D007149 9.4e-158 560.8 455 59.1
arahy.Tifrunner.gnm1.ann1.8BHC3E Arachis hypogaea HOM05D005976 ORTHO05D007149 1.4e-156 557.0 455 58.9
Thhalv10003539m.g Eutrema salsugineum HOM05D005976 ORTHO05D007149 1.8e-156 556.6 453 61.1
CsaV3_6G047940 Cucumis sativus L. HOM05D005976 ORTHO05D007149 2.3e-156 556.2 449 61.7
Sed0007865 Sechium edule HOM05D005976 ORTHO05D007149 2.2e-154 549.7 448 61.2
Sp2g30740 Schrenkiella parvula HOM05D005976 ORTHO05D007149 4.8e-154 548.5 451 59.4
THA.LOC104819155 Tarenaya hassleriana HOM05D005976 ORTHO05D007149 6.3e-154 548.1 454 59.7
AT5G65950 Arabidopsis thaliana HOM05D005976 ORTHO05D007149 8.2e-154 547.7 448 59.6
BolC3t21644H Brassica oleracea HOM05D005976 ORTHO05D007149 2.0e-152 543.1 451 59.0
Sed0007938 Sechium edule HOM05D005976 ORTHO05D007149 4.5e-152 542.0 449 60.4
Carub.0008s2857 Capsella rubella HOM05D005976 ORTHO05D007149 7.7e-152 541.2 453 59.4
CARHR281820 Cardamine hirsuta HOM05D005976 ORTHO05D007149 1.0e-151 540.8 449 59.5
A08p00020 Brassica napus HOM05D005976 ORTHO05D007149 1.3e-151 540.4 451 58.8
AL8G45690 Arabidopsis lyrata HOM05D005976 ORTHO05D007149 8.5e-151 537.7 446 59.0
unitig_746.g26634 Utricularia gibba HOM05D005976 ORTHO05D007149 2.1e-149 533.1 459 57.1
ATR0605G043 Amborella trichopoda HOM05D005976 ORTHO05D007149 8.6e-143 511.1 453 55.6
HPP92_022739 Vanilla planifolia HOM05D005976 ORTHO05D007149 1.5e-142 510.4 448 55.8
CDE06G1894 Ceratophyllum demersum HOM05D005976 ORTHO05D007149 2.5e-142 509.6 449 57.0
Potri.001G457201 Populus trichocarpa HOM05D005976 ORTHO05D007149 3.6e-141 505.8 463 57.0
Zm00001eb252650 Zea mays HOM05D005976 ORTHO05D007149 5.4e-137 491.9 448 55.1
CiPaw.06G032800 Carya illinoinensis HOM05D005976 ORTHO05D007149 3.4e-131 472.6 371 63.9
GSVIVG01026446001 Vitis vinifera HOM05D005976 ORTHO05D007149 8.3e-122 441.4 313 66.1
SEGI_34852 Sequoiadendron giganteum HOM05D005976 ORTHO05D007149 5.2e-116 422.2 493 47.5
BcaNung06215 Brassica carinata HOM05D005976 ORTHO05D007149 6.4e-106 388.7 451 46.6
Hund03584 Selenicereus undatus HOM05D005976 ORTHO05D007149 1.3e-103 380.9 302 61.3
SHI19208 Sapria himalayana HOM05D005976 ORTHO05D007149 2.1e-101 373.6 464 43.3
Cc04_g09170 Coffea canephora HOM05D005976 ORTHO05D007149 4.0e-100 369.4 357 55.2
Pp3c17_22570 Physcomitrium patens HOM05D005976 ORTHO05D007149 7.4e-78 295.4 464 37.7
Mapoly0077s0054 Marchantia polymorpha HOM05D005976 ORTHO05D007149 3.4e-75 286.6 463 36.9
Mapoly0075s0041 Marchantia polymorpha HOM05D005976 ORTHO05D007149 1.5e-67 261.2 456 36.2
SMO144G0134 Selaginella moellendorffii HOM05D005976 ORTHO05D007149 5.0e-50 203.0 374 32.6
CBR_g24120 Chara braunii HOM05D005976 ORTHO05D007149 3.8e-18 97.1 126 39.7
PRCOL_00004193 Prasinoderma coloniale HOM05D005976 ORTHO05D007149 8.6e-10 69.3 147 29.9


User provided reference genes

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