Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C240T4 Lonicera japonica HOM05D004767 ORTHO05D005674 8.9e-196 686.8 359 100.0
SGA_v2.0_scaffold108G30887 Striga asiatica HOM05D004767 ORTHO05D005674 1.5e-150 536.6 354 75.1
TAR381G0314 Trochodendron aralioides HOM05D004767 ORTHO05D005674 2.2e-149 532.7 354 75.4
MSTRG.16702 Avicennia marina HOM05D004767 ORTHO05D005674 7.7e-147 524.2 354 73.4
Oeu010411.1 Olea europaea HOM05D004767 ORTHO05D005674 1.0e-146 523.9 354 74.6
TAR625G0043 Trochodendron aralioides HOM05D004767 ORTHO05D005674 6.5e-146 521.2 355 73.5
GSVIVG01017458001 Vitis vinifera HOM05D004767 ORTHO05D005674 3.2e-145 518.8 355 74.4
Nitab4.5_0000235g0120 Nicotiana tabacum HOM05D004767 ORTHO05D005674 5.5e-145 518.1 355 73.0
Peaxi162Scf00431g00415 Petunia axillaris HOM05D004767 ORTHO05D005674 1.6e-144 516.5 356 73.6
RcHm_v2.0_Chr3g0480691 Rosa chinensis HOM05D004767 ORTHO05D005674 6.1e-144 514.6 354 71.5
Psat1g185000 Pisum sativum HOM05D004767 ORTHO05D005674 7.9e-144 514.2 360 71.7
GSVIVG01020926001 Vitis vinifera HOM05D004767 ORTHO05D005674 7.9e-144 514.2 355 73.8
Glyma.10G129800 Glycine max HOM05D004767 ORTHO05D005674 1.0e-143 513.8 354 70.1
Lalb_Chr05g0214971 Lupinus albus HOM05D004767 ORTHO05D005674 1.4e-143 513.5 354 72.0
Medtr4g111810 Medicago truncatula HOM05D004767 ORTHO05D005674 3.9e-143 511.9 360 70.0
HanXRQChr15g0489741 Helianthus annuus HOM05D004767 ORTHO05D005674 5.1e-143 511.5 354 74.9
Lalb_Chr09g0324851 Lupinus albus HOM05D004767 ORTHO05D005674 8.8e-143 510.8 354 69.8
MD14G1063600 Malus domestica HOM05D004767 ORTHO05D005674 8.8e-143 510.8 355 73.8
PGSC0003DMG400003462 Solanum tuberosum HOM05D004767 ORTHO05D005674 1.1e-142 510.4 355 73.0
Prupe.7G070600 Prunus persica HOM05D004767 ORTHO05D005674 2.5e-142 509.2 353 70.8
VMungo1127G0990 Vigna mungo HOM05D004767 ORTHO05D005674 2.5e-142 509.2 354 69.5
Sopen02g012180 Solanum pennellii HOM05D004767 ORTHO05D005674 3.3e-142 508.8 356 73.0
Nn6g31627 Nelumbo nucifera HOM05D004767 ORTHO05D005674 5.7e-142 508.1 355 72.4
Solyc02g038750.3 Solanum lycopersicum HOM05D004767 ORTHO05D005674 5.7e-142 508.1 356 73.0
TPR.G26773 Trifolium pratense HOM05D004767 ORTHO05D005674 5.7e-142 508.1 361 70.1
TPR.G18695 Trifolium pratense HOM05D004767 ORTHO05D005674 1.3e-141 506.9 361 70.6
Nitab4.5_0006401g0010 Nicotiana tabacum HOM05D004767 ORTHO05D005674 1.7e-141 506.5 337 75.1
MD12G1063000 Malus domestica HOM05D004767 ORTHO05D005674 3.7e-141 505.4 353 70.3
Phvul.011G028400 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 3.7e-141 505.4 354 68.4
Eucgr.H00074 Eucalyptus grandis HOM05D004767 ORTHO05D005674 4.8e-141 505.0 353 70.8
FAN09G1063 Fragaria x ananassa HOM05D004767 ORTHO05D005674 4.8e-141 505.0 353 69.7
FAN02G2069 Fragaria x ananassa HOM05D004767 ORTHO05D005674 4.1e-140 501.9 353 69.4
FvH4_6g22900 Fragaria vesca HOM05D004767 ORTHO05D005674 6.9e-140 501.1 353 69.4
QL10p048860 Quercus lobata HOM05D004767 ORTHO05D005674 9.1e-140 500.7 353 68.8
FAN14G1715 Fragaria x ananassa HOM05D004767 ORTHO05D005674 1.2e-139 500.4 353 69.4
CiPaw.03G094400 Carya illinoinensis HOM05D004767 ORTHO05D005674 2.6e-139 499.2 354 69.8
PGR102G1152 Punica granatum HOM05D004767 ORTHO05D005674 4.5e-139 498.4 354 70.3
Medtr4g077783 Medicago truncatula HOM05D004767 ORTHO05D005674 5.0e-138 495.0 310 75.2
arahy.Tifrunner.gnm1.ann1.BE8FK9 Arachis hypogaea HOM05D004767 ORTHO05D005674 1.1e-137 493.8 408 65.0
Glyma.12G025800 Glycine max HOM05D004767 ORTHO05D005674 2.5e-137 492.7 354 68.1
Lj1g0021179 Lotus japonicus HOM05D004767 ORTHO05D005674 2.5e-137 492.7 357 67.5
arahy.Tifrunner.gnm1.ann1.AK1NBZ Arachis hypogaea HOM05D004767 ORTHO05D005674 5.5e-137 491.5 357 70.9
ECA233G4977 Erigeron canadensis HOM05D004767 ORTHO05D005674 7.2e-137 491.1 355 73.0
Cc07_g12190 Coffea canephora HOM05D004767 ORTHO05D005674 1.6e-136 490.0 289 82.4
CANSAT54G2063 Cannabis sativa HOM05D004767 ORTHO05D005674 2.1e-136 489.6 308 75.3
TWI73G0530 Tripterygium wilfordii HOM05D004767 ORTHO05D005674 1.1e-134 483.8 353 68.6
EL10Ac3g07307 Beta vulgaris HOM05D004767 ORTHO05D005674 1.3e-133 480.3 346 69.9
Ca_02533_v3 Cicer arietinum L. HOM05D004767 ORTHO05D005674 2.2e-133 479.6 358 66.2
Migut.B00408 Erythranthe guttata HOM05D004767 ORTHO05D005674 3.7e-133 478.8 345 68.7
Potri.004G095000 Populus trichocarpa HOM05D004767 ORTHO05D005674 4.8e-133 478.4 354 67.2
PSO017G2362 Papaver somniferum HOM05D004767 ORTHO05D005674 6.3e-133 478.0 354 66.7
Potri.017G120100 Populus trichocarpa HOM05D004767 ORTHO05D005674 6.3e-133 478.0 354 66.4
Sed0020265 Sechium edule HOM05D004767 ORTHO05D005674 1.8e-132 476.5 305 75.7
DCAR_019301 Daucus carota HOM05D004767 ORTHO05D005674 3.1e-132 475.7 338 72.8
Sed0012135 Sechium edule HOM05D004767 ORTHO05D005674 5.3e-132 474.9 304 76.3
Hma1.2p1_0085F.1_g044390 Hydrangea macrophylla HOM05D004767 ORTHO05D005674 9.1e-132 474.2 377 70.0
Hund21306 Selenicereus undatus HOM05D004767 ORTHO05D005674 2.0e-131 473.0 309 73.8
Aqoxy6G02991 Aquilegia oxysepala HOM05D004767 ORTHO05D005674 2.9e-130 469.2 360 65.8
Duzib264G0649 Durio zibethinus HOM05D004767 ORTHO05D005674 8.5e-130 467.6 355 66.5
Manes.02G116500 Manihot esculenta HOM05D004767 ORTHO05D005674 1.1e-129 467.2 355 65.9
Cpa.g.sc365.7 Carica papaya HOM05D004767 ORTHO05D005674 1.9e-129 466.5 354 65.5
Rhsim08G0026000 Rhododendron simsii HOM05D004767 ORTHO05D005674 2.5e-129 466.1 387 63.8
Sc03g0004110 Simmondsia chinensis HOM05D004767 ORTHO05D005674 9.4e-129 464.2 308 72.1
SalBow6G2358 Salvia bowleyana HOM05D004767 ORTHO05D005674 3.6e-128 462.2 365 66.3
EL10Ac8g19950 Beta vulgaris HOM05D004767 ORTHO05D005674 1.0e-127 460.7 311 69.8
Gorai.012G034000 Gossypium raimondii HOM05D004767 ORTHO05D005674 2.3e-127 459.5 356 67.7
unitig_61.g26025 Utricularia gibba HOM05D004767 ORTHO05D005674 2.3e-127 459.5 357 63.3
THA.LOC104820618 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 8.8e-127 457.6 354 63.8
TAR625G0966 Trochodendron aralioides HOM05D004767 ORTHO05D005674 1.1e-126 457.2 334 69.8
ClCG10G013460 Citrullus lanatus HOM05D004767 ORTHO05D005674 1.5e-126 456.8 309 71.8
Lsat_1_v5_gn_8_114040 Lactuca sativa HOM05D004767 ORTHO05D005674 2.6e-126 456.1 340 71.2
COL.COLO4_35713 Corchorus olitorius HOM05D004767 ORTHO05D005674 3.3e-126 455.7 354 65.3
SalBow6G5765 Salvia bowleyana HOM05D004767 ORTHO05D005674 1.7e-125 453.4 365 65.8
Gohir.D04G022900 Gossypium hirsutum HOM05D004767 ORTHO05D005674 2.8e-125 452.6 356 68.0
THA.LOC104816808 Tarenaya hassleriana HOM05D004767 ORTHO05D005674 3.7e-125 452.2 357 64.1
Gohir.A05G385700 Gossypium hirsutum HOM05D004767 ORTHO05D005674 6.3e-125 451.4 356 67.7
Thecc.01G130700 Theobroma cacao HOM05D004767 ORTHO05D005674 1.1e-124 450.7 303 72.6
SalBow2G0232 Salvia bowleyana HOM05D004767 ORTHO05D005674 5.3e-124 448.4 354 65.5
CDE08G0085 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 7.0e-124 448.0 355 65.6
AUR62012542 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.2e-123 447.2 303 71.6
Atru.chr5.1742 Acer truncatum HOM05D004767 ORTHO05D005674 2.6e-123 446.0 354 67.2
Lj3A907T66 Lonicera japonica HOM05D004767 ORTHO05D005674 2.6e-123 446.0 349 65.9
Sabra17G0099100 Salix brachista HOM05D004767 ORTHO05D005674 3.5e-123 445.7 363 63.4
HPP92_003941 Vanilla planifolia HOM05D004767 ORTHO05D005674 3.5e-123 445.7 355 66.2
CDE02G0197 Ceratophyllum demersum HOM05D004767 ORTHO05D005674 7.7e-123 444.5 356 66.6
Psat1g210160 Pisum sativum HOM05D004767 ORTHO05D005674 5.0e-122 441.8 273 77.7
Aa31LG9G14020 Aethionema arabicum HOM05D004767 ORTHO05D005674 6.5e-122 441.4 354 65.8
Actinidia28754 Actinidia chinensis HOM05D004767 ORTHO05D005674 2.1e-120 436.4 295 75.3
PSO170G0853 Papaver somniferum HOM05D004767 ORTHO05D005674 2.1e-120 436.4 354 63.3
CARHR128360 Cardamine hirsuta HOM05D004767 ORTHO05D005674 1.4e-119 433.7 355 64.5
COL.COLO4_38041 Corchorus olitorius HOM05D004767 ORTHO05D005674 1.4e-119 433.7 312 68.3
RcHm_v2.0_Chr4g0410631 Rosa chinensis HOM05D004767 ORTHO05D005674 3.0e-119 432.6 355 62.8
Carub.0004s1593 Capsella rubella HOM05D004767 ORTHO05D005674 1.2e-118 430.6 355 64.2
AT2G34260 Arabidopsis thaliana HOM05D004767 ORTHO05D005674 2.6e-118 429.5 355 64.2
BolC4t23059H Brassica oleracea HOM05D004767 ORTHO05D005674 4.8e-117 425.2 306 67.0
Os07g0660700 Oryza sativa ssp. japonica HOM05D004767 ORTHO05D005674 4.8e-117 425.2 346 61.0
C04p14860 Brassica napus HOM05D004767 ORTHO05D005674 6.3e-117 424.9 306 67.0
BcaC02g11487 Brassica carinata HOM05D004767 ORTHO05D005674 8.3e-117 424.5 306 67.0
Sp4g16550 Schrenkiella parvula HOM05D004767 ORTHO05D005674 3.1e-116 422.5 306 67.0
A05p11370 Brassica napus HOM05D004767 ORTHO05D005674 4.1e-116 422.2 306 66.7
BraA05t20086Z Brassica rapa HOM05D004767 ORTHO05D005674 4.1e-116 422.2 306 66.7
C04p63650 Brassica napus HOM05D004767 ORTHO05D005674 1.2e-115 420.6 306 67.0
BcaB06g28745 Brassica carinata HOM05D004767 ORTHO05D005674 1.6e-115 420.2 299 67.2
BcaB02g09562 Brassica carinata HOM05D004767 ORTHO05D005674 4.5e-115 418.7 298 67.1
MELO3C026614.2 Cucumis melo HOM05D004767 ORTHO05D005674 4.5e-115 418.7 308 66.2
BraA04t18130Z Brassica rapa HOM05D004767 ORTHO05D005674 1.3e-114 417.2 306 66.3
Zm00001eb349300 Zea mays HOM05D004767 ORTHO05D005674 2.2e-114 416.4 350 60.3
vmacro18476 Vaccinium macrocarpon HOM05D004767 ORTHO05D005674 1.6e-112 410.2 309 65.7
Dinv40217 Davidia involucrata HOM05D004767 ORTHO05D005674 8.3e-109 397.9 230 83.5
AL4G30210 Arabidopsis lyrata HOM05D004767 ORTHO05D005674 1.0e-103 380.9 364 58.2
Haze_03669 Corylus avellana HOM05D004767 ORTHO05D005674 1.4e-103 380.6 315 63.8
Thhalv10016919m.g Eutrema salsugineum HOM05D004767 ORTHO05D005674 2.0e-102 376.7 306 60.8
CsaV3_3G043180 Cucumis sativus L. HOM05D004767 ORTHO05D005674 1.0e-98 364.4 301 60.5
Mapoly0040s0029 Marchantia polymorpha HOM05D004767 ORTHO05D005674 5.0e-98 362.1 307 56.7
Glyma.11G099900 Glycine max HOM05D004767 ORTHO05D005674 2.1e-96 356.7 301 59.1
CSS0049016 Camellia sinensis var. sinensis HOM05D004767 ORTHO05D005674 2.8e-96 356.3 290 64.5
Phvul.005G015700 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 9.8e-94 347.8 309 58.3
AUR62014654 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.9e-92 343.6 308 58.4
AagrBONN_evm.TU.Sc2ySwM_344.1647 Anthoceros agrestis HOM05D004767 ORTHO05D005674 1.2e-91 340.9 288 56.2
SMO364G0336 Selaginella moellendorffii HOM05D004767 ORTHO05D005674 1.2e-91 340.9 358 50.0
Ah.09g236950 Amaranthus hybridus HOM05D004767 ORTHO05D005674 1.6e-91 340.5 316 56.0
Phvul.005G015600 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 1.0e-90 337.8 307 56.7
Cfa006688 Carpinus fangiana HOM05D004767 ORTHO05D005674 7.3e-89 331.6 266 65.0
AUR62044118 Chenopodium quinoa HOM05D004767 ORTHO05D005674 1.8e-87 327.0 289 60.2
A04p26260 Brassica napus HOM05D004767 ORTHO05D005674 6.0e-83 312.0 211 69.7
CBR_g37537 Chara braunii HOM05D004767 ORTHO05D005674 1.3e-77 294.3 277 49.5
MCO07G146 Micromonas commoda HOM05D004767 ORTHO05D005674 4.3e-65 252.7 298 42.3
Glyma.20G080900 Glycine max HOM05D004767 ORTHO05D005674 1.1e-63 248.1 144 81.9
Medtr1g076780 Medicago truncatula HOM05D004767 ORTHO05D005674 2.2e-61 240.4 156 75.6
SHI13610 Sapria himalayana HOM05D004767 ORTHO05D005674 1.1e-52 211.5 247 44.5
Oeu036465.1 Olea europaea HOM05D004767 ORTHO05D005674 4.3e-49 199.5 286 45.8
ATR0680G041 Amborella trichopoda HOM05D004767 ORTHO05D005674 2.1e-48 197.2 155 60.6
Psat6g227720 Pisum sativum HOM05D004767 ORTHO05D005674 9.0e-47 191.8 145 65.5
SEGI_28078 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 1.0e-45 188.3 142 63.4
Psat6g227760 Pisum sativum HOM05D004767 ORTHO05D005674 5.5e-44 182.6 140 65.7
PRCOL_00000722 Prasinoderma coloniale HOM05D004767 ORTHO05D005674 7.1e-44 182.2 293 38.2
Cre02.g113250 Chlamydomonas reinhardtii HOM05D004767 ORTHO05D005674 3.3e-41 173.3 245 40.8
Phvul.011G028501 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 2.0e-38 164.1 117 61.5
Pp3c5_17020 Physcomitrium patens HOM05D004767 ORTHO05D005674 3.2e-36 156.8 296 34.8
QL07p001807 Quercus lobata HOM05D004767 ORTHO05D005674 6.9e-31 139.0 153 46.4
BolC4t27833H Brassica oleracea HOM05D004767 ORTHO05D005674 4.2e-28 129.8 316 35.8
Sabra17G0099200 Salix brachista HOM05D004767 ORTHO05D005674 2.2e-24 117.5 79 70.9
ATR0231G001 Amborella trichopoda HOM05D004767 ORTHO05D005674 3.1e-23 113.6 90 62.2
SEGI_20710 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 1.9e-20 104.4 94 55.3
SEGI_27353 Sequoiadendron giganteum HOM05D004767 ORTHO05D005674 9.7e-17 92.0 63 66.7
Cc11_g01140 Coffea canephora HOM05D004767 ORTHO05D005674 1.0e-13 82.0 49 69.4
Lsat_1_v5_gn_6_103760 Lactuca sativa HOM05D004767 ORTHO05D005674 1.0e-13 82.0 58 69.0
Phvul.011G028300 Phaseolus vulgaris HOM05D004767 ORTHO05D005674 1.0e-13 82.0 46 78.3
Actinidia09820 Actinidia chinensis HOM05D004767 ORTHO05D005674 3.8e-13 80.1 56 66.1
vmacro07517 Vaccinium macrocarpon HOM05D004767 ORTHO05D005674 5.0e-13 79.7 54 66.7
GSVIVG01020113001 Vitis vinifera HOM05D004767 ORTHO05D005674 1.8e-10 71.2 53 69.8
Cc11_g01130 Coffea canephora HOM05D004767 ORTHO05D005674 5.2e-10 69.7 42 78.6
Haze_27084 Corylus avellana HOM05D002303 ORTHO05D007639 2.0e-09 67.8 252 25.4
Actinidia28377 Actinidia chinensis HOM05D005323 ORTHO05D006820 2.8e-08 63.9 228 22.4
arahy.Tifrunner.gnm1.ann1.0Z7T57 Arachis hypogaea HOM05D003913 ORTHO05D004803 4.8e-08 63.2 148 30.4
RcHm_v2.0_Chr5g0032061 Rosa chinensis HOM05D004767 ORTHO05D005674 1.4e-07 61.6 35 71.4
arahy.Tifrunner.gnm1.ann1.F1WV5B Arachis hypogaea HOM05D003913 ORTHO05D004803 3.1e-07 60.5 148 29.1
Eucgr.L00018 Eucalyptus grandis HOM05D005323 ORTHO05D006820 9.1e-07 58.9 165 21.8
HPP92_017571 Vanilla planifolia HOM05D005323 ORTHO05D006820 1.6e-06 58.2 299 20.4
Actinidia27124 Actinidia chinensis HOM05D005323 ORTHO05D006820 5.9e-06 56.2 223 22.9


User provided reference genes

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