Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C209T2 Lonicera japonica HOM05D006805 ORTHO05D008656 2.2e-151 538.9 263 100.0
Dinv40030 Davidia involucrata HOM05D006805 ORTHO05D008656 1.3e-111 406.8 257 76.3
CSS0042312 Camellia sinensis var. sinensis HOM05D006805 ORTHO05D008656 2.8e-106 389.0 255 75.7
Rhsim08G0122900 Rhododendron simsii HOM05D006805 ORTHO05D008656 1.1e-105 387.1 254 75.2
GSVIVG01018866001 Vitis vinifera HOM05D006805 ORTHO05D008656 4.1e-105 385.2 254 74.0
QL06p035053 Quercus lobata HOM05D006805 ORTHO05D008656 4.5e-104 381.7 253 71.5
TWI73G0963 Tripterygium wilfordii HOM05D006805 ORTHO05D008656 2.2e-103 379.4 254 69.3
vmacro17722 Vaccinium macrocarpon HOM05D006805 ORTHO05D008656 2.2e-103 379.4 254 72.8
TAR381G0553 Trochodendron aralioides HOM05D006805 ORTHO05D008656 3.8e-103 378.6 254 72.0
Nitab4.5_0000723g0180 Nicotiana tabacum HOM05D006805 ORTHO05D008656 5.0e-103 378.3 246 72.8
Peaxi162Scf00418g00926 Petunia axillaris HOM05D006805 ORTHO05D008656 9.4e-102 374.0 248 71.4
CAN.G358.30 Capsicum annuum HOM05D006805 ORTHO05D008656 1.2e-101 373.6 254 69.7
Hma1.2p1_0913F.1_g235930 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.2e-101 373.6 255 72.9
Hma1.2p1_0913F.1_g235940 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 1.2e-101 373.6 255 72.9
Nitab4.5_0004708g0010 Nicotiana tabacum HOM05D006805 ORTHO05D008656 2.7e-101 372.5 248 71.0
Solyc02g084810.3 Solanum lycopersicum HOM05D006805 ORTHO05D008656 7.9e-101 370.9 254 70.1
Potri.007G019400 Populus trichocarpa HOM05D006805 ORTHO05D008656 1.0e-100 370.5 254 69.3
Cfa006913 Carpinus fangiana HOM05D006805 ORTHO05D008656 1.8e-100 369.8 254 69.7
Sopen02g029480 Solanum pennellii HOM05D006805 ORTHO05D008656 1.8e-100 369.8 254 69.7
Nn1g05800 Nelumbo nucifera HOM05D006805 ORTHO05D008656 2.3e-100 369.4 254 68.5
Prupe.7G161800 Prunus persica HOM05D006805 ORTHO05D008656 2.3e-100 369.4 254 68.1
Thecc.01G027300 Theobroma cacao HOM05D006805 ORTHO05D008656 2.2e-98 362.8 254 68.1
Lalb_Chr16g0391011 Lupinus albus HOM05D006805 ORTHO05D008656 2.8e-98 362.5 258 65.9
Atru.chr3.728 Acer truncatum HOM05D006805 ORTHO05D008656 4.8e-98 361.7 257 69.3
Haze_03843 Corylus avellana HOM05D006805 ORTHO05D008656 8.2e-98 360.9 261 67.8
DCAR_025973 Daucus carota HOM05D006805 ORTHO05D008656 8.2e-98 360.9 253 67.6
Glyma.02G052900 Glycine max HOM05D006805 ORTHO05D008656 8.2e-98 360.9 256 67.2
Cc07_g10060 Coffea canephora HOM05D006805 ORTHO05D008656 2.4e-97 359.4 253 68.0
arahy.Tifrunner.gnm1.ann1.P9L48X Arachis hypogaea HOM05D006805 ORTHO05D008656 5.3e-97 358.2 254 65.0
Gohir.A02G167800 Gossypium hirsutum HOM05D006805 ORTHO05D008656 5.3e-97 358.2 255 65.5
Gorai.003G012500 Gossypium raimondii HOM05D006805 ORTHO05D008656 5.3e-97 358.2 255 65.1
Gohir.D03G012200 Gossypium hirsutum HOM05D006805 ORTHO05D008656 6.9e-97 357.8 255 65.1
RcHm_v2.0_Chr2g0100411 Rosa chinensis HOM05D006805 ORTHO05D008656 6.9e-97 357.8 254 66.1
MSTRG.2490 Avicennia marina HOM05D006805 ORTHO05D008656 9.1e-97 357.5 254 65.4
CiPaw.08G138000 Carya illinoinensis HOM05D006805 ORTHO05D008656 1.2e-96 357.1 254 68.5
Aqoxy5G01548 Aquilegia oxysepala HOM05D006805 ORTHO05D008656 2.6e-96 355.9 256 68.0
arahy.Tifrunner.gnm1.ann1.FKKR7E Arachis hypogaea HOM05D006805 ORTHO05D008656 2.6e-96 355.9 247 65.6
PSO731G0058 Papaver somniferum HOM05D006805 ORTHO05D008656 3.4e-96 355.5 257 66.5
Duzib147G1209 Durio zibethinus HOM05D006805 ORTHO05D008656 1.7e-95 353.2 260 63.8
Migut.H02510 Erythranthe guttata HOM05D006805 ORTHO05D008656 2.2e-95 352.8 254 65.4
ClCG01G019940 Citrullus lanatus HOM05D006531 ORTHO05D008656 2.9e-95 352.4 258 64.7
VMungo0251G3732 Vigna mungo HOM05D006805 ORTHO05D008656 2.9e-95 352.4 254 65.7
Duzib264G1030 Durio zibethinus HOM05D006805 ORTHO05D008656 3.8e-95 352.1 268 63.8
FvH4_1g12510 Fragaria vesca HOM05D006805 ORTHO05D008656 8.5e-95 350.9 254 65.0
Psat4g096160 Pisum sativum HOM05D006805 ORTHO05D008656 8.5e-95 350.9 255 65.9
HanXRQChr14g0441241 Helianthus annuus HOM05D006805 ORTHO05D008656 1.4e-94 350.1 252 64.7
Lj4g0018076 Lotus japonicus HOM05D006805 ORTHO05D008656 2.5e-94 349.4 259 65.3
Sabra07G0016600 Salix brachista HOM05D006805 ORTHO05D008656 2.5e-94 349.4 280 61.8
Phvul.003G257300 Phaseolus vulgaris HOM05D006805 ORTHO05D008656 3.2e-94 349.0 254 64.2
Sed0012409 Sechium edule HOM05D006805 ORTHO05D008656 3.2e-94 349.0 254 63.8
Hund16454 Selenicereus undatus HOM05D006805 ORTHO05D008656 3.2e-94 349.0 229 69.0
SalBow8G5631 Salvia bowleyana HOM05D006805 ORTHO05D008656 5.5e-94 348.2 259 63.3
COL.COLO4_22005 Corchorus olitorius HOM05D006805 ORTHO05D008656 1.2e-93 347.1 273 62.3
THA.LOC104804245 Tarenaya hassleriana HOM05D006805 ORTHO05D008656 1.6e-93 346.7 257 64.2
CsaV3_6G046700 Cucumis sativus L. HOM05D006805 ORTHO05D008656 2.1e-93 346.3 255 63.5
CANSAT01G1867 Cannabis sativa HOM05D006805 ORTHO05D008656 6.1e-93 344.7 257 64.2
AUR62004104 Chenopodium quinoa HOM05D006805 ORTHO05D008656 6.1e-93 344.7 253 64.0
SGA_v2.0_scaffold51G18803 Striga asiatica HOM05D006805 ORTHO05D008656 2.3e-92 342.8 304 57.6
MD15G1252400 Malus domestica HOM05D006805 ORTHO05D008656 3.0e-92 342.4 256 64.5
Manes.01G140000 Manihot esculenta HOM05D006805 ORTHO05D008656 5.2e-92 341.7 255 65.5
PGR102G0609 Punica granatum HOM05D006805 ORTHO05D008656 8.8e-92 340.9 255 63.9
Medtr8g076840 Medicago truncatula HOM05D006805 ORTHO05D008656 1.1e-91 340.5 256 63.7
FAN19G2522 Fragaria x ananassa HOM05D006805 ORTHO05D008656 2.0e-91 339.7 260 62.3
AUR62007618 Chenopodium quinoa HOM05D006805 ORTHO05D008656 3.3e-91 339.0 225 66.7
MELO3C007867.2 Cucumis melo HOM05D006805 ORTHO05D008656 6.3e-90 334.7 282 58.9
ATR1154G040 Amborella trichopoda HOM05D006805 ORTHO05D008656 1.4e-89 333.6 254 63.8
ECA238G0382 Erigeron canadensis HOM05D006805 ORTHO05D008656 2.4e-89 332.8 243 63.0
Eucgr.J02381 Eucalyptus grandis HOM05D006805 ORTHO05D008656 4.1e-89 332.0 252 63.1
Thhalv10025347m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 4.1e-89 332.0 255 61.6
Carub.0007s0387 Capsella rubella HOM05D006805 ORTHO05D008656 7.0e-89 331.3 254 61.0
Sc03g0003200 Simmondsia chinensis HOM05D006805 ORTHO05D004508 9.1e-89 330.9 263 63.1
BcaNung05308 Brassica carinata HOM05D000394 ORTHO05D000299 1.2e-88 330.5 254 61.4
AL7G14650 Arabidopsis lyrata HOM05D006805 ORTHO05D008656 1.6e-88 330.1 254 61.0
AT4G36440 Arabidopsis thaliana HOM05D006805 ORTHO05D008656 2.0e-88 329.7 257 61.5
A01p02400 Brassica napus HOM05D000394 ORTHO05D008656 3.5e-88 328.9 254 61.4
Thhalv10000178m.g Eutrema salsugineum HOM05D006805 ORTHO05D008656 3.5e-88 328.9 254 61.0
BraA01t00229Z Brassica rapa HOM05D006805 ORTHO05D008656 4.5e-88 328.6 254 61.0
Ciclev10025725m.g Citrus clementina HOM05D006805 ORTHO05D008656 7.7e-88 327.8 208 72.6
Sp7g34100 Schrenkiella parvula HOM05D006805 ORTHO05D008656 1.3e-87 327.0 254 60.6
BcaNung00732 Brassica carinata HOM05D006805 ORTHO05D008656 1.7e-87 326.6 254 60.6
C01p02610 Brassica napus HOM05D006805 ORTHO05D008656 1.7e-87 326.6 254 60.6
BolC1t00250H Brassica oleracea HOM05D006805 ORTHO05D008656 1.7e-87 326.6 254 60.6
CARHR244770 Cardamine hirsuta HOM05D006805 ORTHO05D008656 7.2e-86 321.2 254 59.4
unitig_61.g26353 Utricularia gibba HOM05D006805 ORTHO05D008656 4.0e-84 315.5 253 61.7
Hma1.2p1_2955F.1_g330740 Hydrangea macrophylla HOM05D006805 ORTHO05D008656 6.3e-82 308.1 201 73.1
Ca_22341_v3 Cicer arietinum L. HOM05D006805 ORTHO05D008656 2.9e-79 299.3 254 58.3
SGA_v2.0_scaffold7G03543 Striga asiatica HOM05D006805 ORTHO05D003527 5.5e-78 295.0 211 65.9
FAN23G0481 Fragaria x ananassa HOM05D006805 ORTHO05D008656 6.1e-77 291.6 254 57.1
HPP92_008328 Vanilla planifolia HOM05D006805 ORTHO05D008656 1.0e-76 290.8 209 62.2
CDE06G0805 Ceratophyllum demersum HOM05D006805 ORTHO05D008656 6.8e-76 288.1 206 62.1
Sc03g0003190 Simmondsia chinensis HOM05D006805 ORTHO05D008656 9.1e-73 277.7 262 55.3
FAN26G3258 Fragaria x ananassa HOM05D006805 ORTHO05D008656 5.5e-70 268.5 260 52.7
EL10As8g23891 Beta vulgaris HOM05D006805 ORTHO05D008656 1.7e-66 256.9 169 67.5
MBI16_g23836_MAGBIO Magnolia biondii HOM05D006805 ORTHO05D008656 5.9e-64 248.4 179 67.0
Lsat_1_v5_gn_2_78040 Lactuca sativa HOM05D006805 ORTHO05D008656 7.8e-64 248.1 222 55.0
AagrBONN_evm.TU.Sc2ySwM_228.1023 Anthoceros agrestis HOM05D006805 ORTHO05D001783 5.4e-57 225.3 251 46.6
Pp3c15_5920 Physcomitrium patens HOM05D006805 ORTHO05D008656 3.9e-55 219.2 242 43.0
Mapoly0033s0048 Marchantia polymorpha HOM05D006805 ORTHO05D008656 8.6e-55 218.0 254 45.3
SMO141G0060 Selaginella moellendorffii HOM05D006805 ORTHO05D008656 2.5e-54 216.5 202 50.0
Pp3c9_15730 Physcomitrium patens HOM05D006805 ORTHO05D008656 9.5e-54 214.5 262 41.6
HanXRQChr12g0370271 Helianthus annuus HOM05D006805 ORTHO05D008656 2.8e-53 213.0 197 53.8
Dinv10224 Davidia involucrata HOM05D006805 ORTHO05D008656 1.1e-52 211.1 137 73.0
TPR.G21539 Trifolium pratense HOM05D000894 ORTHO05D001833 6.0e-48 195.3 130 68.5
arahy.Tifrunner.gnm1.ann1.CY3TH7 Arachis hypogaea HOM05D006805 ORTHO05D008656 2.5e-46 189.9 228 48.7
Aa31LG6G13250 Aethionema arabicum HOM05D006805 ORTHO05D008656 7.3e-46 188.3 166 55.4
Glyma.16G133100 Glycine max HOM05D006805 ORTHO05D008656 1.1e-44 184.5 119 68.9
HanXRQChr09g0256121 Helianthus annuus HOM05D006805 ORTHO05D008656 2.1e-40 170.2 144 58.3
Glyma.10G129950 Glycine max HOM05D006805 ORTHO05D008656 3.8e-34 149.4 112 60.7
Cpa.g.sc6.179 Carica papaya HOM05D006805 ORTHO05D008656 2.8e-29 133.3 122 52.5
EL10Ac7g17413 Beta vulgaris HOM05D006805 ORTHO05D008656 8.1e-29 131.7 87 62.1
MD02G1139100 Malus domestica HOM05D006805 ORTHO05D008656 3.2e-25 119.8 113 54.9
HanXRQChr16g0499431 Helianthus annuus HOM05D006805 ORTHO05D008656 1.0e-23 114.8 177 39.5
Zm00001eb128340 Zea mays HOM05D006805 ORTHO05D008656 3.4e-11 73.2 53 64.2
RcHm_v2.0_Chr2g0136281 Rosa chinensis HOM05D006805 ORTHO05D008656 5.5e-09 65.9 42 69.0
Aa31LG6G13240 Aethionema arabicum HOM05D006805 ORTHO05D008656 1.9e-06 57.4 67 47.8


User provided reference genes

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