Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C176T4 Lonicera japonica HOM05D006237 ORTHO05D002967 3.9e-111 404.8 206 100.0
Dinv35235 Davidia involucrata HOM05D006237 ORTHO05D002967 6.5e-34 148.3 197 49.2
Lsat_1_v5_gn_4_66521 Lactuca sativa HOM05D006237 ORTHO05D002967 3.5e-27 125.9 211 43.6
Nitab4.5_0006974g0010 Nicotiana tabacum HOM05D006237 ORTHO05D002967 5.9e-27 125.2 207 44.9
Nitab4.5_0005550g0040 Nicotiana tabacum HOM05D006237 ORTHO05D002967 2.3e-26 123.2 209 44.5
Actinidia34142 Actinidia chinensis HOM05D006237 ORTHO05D002967 8.0e-24 114.8 149 51.0
TAR636G1281 Trochodendron aralioides HOM05D002456 ORTHO05D002967 2.0e-22 110.2 229 41.0
MSTRG.27097 Avicennia marina HOM05D006237 ORTHO05D002967 1.1e-20 104.4 224 40.2
Cpa.g.sc1.394 Carica papaya HOM05D006237 ORTHO05D002967 1.0e-18 97.8 205 39.0
TAR629G2491 Trochodendron aralioides HOM05D006237 ORTHO05D002967 3.9e-18 95.9 191 40.3
Oeu048745.1 Olea europaea HOM05D006237 ORTHO05D002967 1.1e-17 94.4 221 38.5
Manes.14G023800 Manihot esculenta HOM05D006237 ORTHO05D002967 1.6e-16 90.5 211 38.4
Prupe.3G056900 Prunus persica HOM05D006237 ORTHO05D002967 3.6e-16 89.4 200 35.5
RcHm_v2.0_Chr2g0141031 Rosa chinensis HOM05D006237 ORTHO05D002967 3.6e-16 89.4 198 35.4
TWI12G0168 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 3.1e-15 86.3 200 37.5
Nn1g09125 Nelumbo nucifera HOM05D006237 ORTHO05D002967 6.8e-15 85.1 220 34.1
Migut.F00315 Erythranthe guttata HOM05D006237 ORTHO05D002967 2.0e-14 83.6 218 38.1
SGA_v2.0_scaffold44G16742 Striga asiatica HOM05D006237 ORTHO05D002967 2.0e-14 83.6 218 35.8
FvH4_6g32580 Fragaria vesca HOM05D006237 ORTHO05D002967 4.4e-14 82.4 204 35.8
Cfa016275 Carpinus fangiana HOM05D006237 ORTHO05D002967 5.8e-14 82.0 208 31.2
FAN02G0617 Fragaria x ananassa HOM05D006237 ORTHO05D002967 1.7e-13 80.5 198 35.9
SalBow4G0349 Salvia bowleyana HOM05D006237 ORTHO05D002967 1.7e-13 80.5 218 33.5
CiPaw.15G152100 Carya illinoinensis HOM05D006237 ORTHO05D002967 2.2e-13 80.1 205 33.2
CsaV3_5G001160 Cucumis sativus L. HOM05D006237 ORTHO05D002967 2.2e-13 80.1 220 32.3
Haze_00028 Corylus avellana HOM05D006237 ORTHO05D002967 2.9e-13 79.7 209 32.5
FAN05G1350 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.9e-13 79.7 198 35.4
FAN05G1909 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.9e-13 79.7 198 35.4
FAN14G2466 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.9e-13 79.7 205 35.1
VMungo1127G1244 Vigna mungo HOM05D001780 ORTHO05D004373 2.9e-13 79.7 215 34.9
Oeu022599.1 Olea europaea HOM05D006237 ORTHO05D002967 6.4e-13 78.6 189 37.6
Potri.012G144700 Populus trichocarpa HOM05D006237 ORTHO05D002967 1.4e-12 77.4 226 34.1
MBI16_g19591_MAGBIO Magnolia biondii HOM05D006237 ORTHO05D002967 1.9e-12 77.0 214 35.0
GSVIVG01036122001 Vitis vinifera HOM05D006237 ORTHO05D002967 1.9e-12 77.0 199 34.7
TWI56G0599 Tripterygium wilfordii HOM05D006237 ORTHO05D002967 2.4e-12 76.6 209 35.9
DCAR_027497 Daucus carota HOM05D006237 ORTHO05D002967 7.0e-12 75.1 247 31.2
Eucgr.K00287 Eucalyptus grandis HOM05D006237 ORTHO05D002967 7.0e-12 75.1 212 33.0
MD15G1412900 Malus domestica HOM05D006237 ORTHO05D002967 9.2e-12 74.7 196 33.2
PGR142G0430 Punica granatum HOM05D006237 ORTHO05D002967 9.2e-12 74.7 204 32.8
ClCG01G001020 Citrullus lanatus HOM05D006237 ORTHO05D002967 2.7e-11 73.2 174 31.0
Sc20g0002110 Simmondsia chinensis HOM05D006237 ORTHO05D002967 2.7e-11 73.2 219 37.4
Phvul.011G076300 Phaseolus vulgaris HOM05D006237 ORTHO05D002967 3.5e-11 72.8 217 35.9
Sopen10g030770 Solanum pennellii HOM05D006237 ORTHO05D002967 6.0e-11 72.0 197 33.5
Thecc.05G176100 Theobroma cacao HOM05D006237 ORTHO05D002967 1.7e-10 70.5 201 32.8
Sed0010472 Sechium edule HOM05D006237 ORTHO05D002967 3.9e-10 69.3 208 30.8
MELO3C005830.2 Cucumis melo HOM05D006237 ORTHO05D002967 5.0e-10 68.9 217 30.0
THA.LOC104821384 Tarenaya hassleriana HOM05D006237 ORTHO05D002967 6.6e-10 68.6 144 40.3
Lj3g0001662 Lotus japonicus HOM05D006237 ORTHO05D002967 1.1e-09 67.8 227 30.8
HanXRQChr02g0055961 Helianthus annuus HOM05D006237 ORTHO05D002967 2.5e-09 66.6 212 32.5
QL09p013331 Quercus lobata HOM05D006237 ORTHO05D002967 2.5e-09 66.6 211 33.2
HPP92_005592 Vanilla planifolia HOM05D006237 ORTHO05D002967 2.5e-09 66.6 220 30.5
Solyc10g080160.2 Solanum lycopersicum HOM05D006237 ORTHO05D002967 4.3e-09 65.9 197 32.5
MD09G1200300 Malus domestica HOM05D006237 ORTHO05D002967 7.3e-09 65.1 197 30.5
Peaxi162Scf00078g00351 Petunia axillaris HOM05D006237 ORTHO05D002967 7.3e-09 65.1 140 37.1
Rhsim09G0091100 Rhododendron simsii HOM05D006237 ORTHO05D002967 7.3e-09 65.1 129 42.6
PGSC0003DMG400023687 Solanum tuberosum HOM05D006237 ORTHO05D002967 9.5e-09 64.7 207 32.4
Ca_08896_v3 Cicer arietinum L. HOM05D006237 ORTHO05D002967 1.2e-08 64.3 213 31.9
unitig_0.g1076 Utricularia gibba HOM05D006237 ORTHO05D002967 2.8e-08 63.2 149 36.9
Psat6g075200 Pisum sativum HOM05D006237 ORTHO05D002967 3.6e-08 62.8 211 33.2
HPP92_005582 Vanilla planifolia HOM05D006237 ORTHO05D002967 8.1e-08 61.6 220 29.5
FAN09G4095 Fragaria x ananassa HOM05D006237 ORTHO05D002967 2.3e-07 60.1 201 29.4
Nitab4.5_0005550g0020 Nicotiana tabacum HOM05D007884 ORTHO05D009968 2.6e-06 56.6 93 48.4


User provided reference genes

Program Settings