Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C151G8 Lonicera japonica HOM05D006615 ORTHO05D007999 3.9e-106 388.3 214 100.0
Actinidia12040 Actinidia chinensis HOM05D006615 ORTHO05D007999 5.0e-85 318.2 211 74.4
vmacro05309 Vaccinium macrocarpon HOM05D006615 ORTHO05D007999 3.6e-83 312.0 213 78.4
Rhsim10G0115300 Rhododendron simsii HOM05D006615 ORTHO05D007999 3.3e-81 305.4 213 77.9
Peaxi162Scf00549g00014 Petunia axillaris HOM05D006615 ORTHO05D007999 1.7e-80 303.1 209 78.0
HanXRQChr09g0263661 Helianthus annuus HOM05D006615 ORTHO05D007999 8.2e-80 300.8 210 77.6
QL06p040870 Quercus lobata HOM05D006615 ORTHO05D007999 1.4e-79 300.1 211 76.8
Gohir.D12G070500 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.1e-79 298.5 208 74.5
Gorai.008G077500 Gossypium raimondii HOM05D006615 ORTHO05D007999 4.1e-79 298.5 208 74.5
Dinv26838 Davidia involucrata HOM05D000573 ORTHO05D000425 5.3e-79 298.1 175 80.6
Haze_15377 Corylus avellana HOM05D006615 ORTHO05D007999 2.6e-78 295.8 209 76.6
GSVIVG01022099001 Vitis vinifera HOM05D006615 ORTHO05D007999 7.7e-78 294.3 210 69.5
Aqoxy5G01194 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 1.3e-77 293.5 215 66.0
CAN.G370.40 Capsicum annuum HOM05D006615 ORTHO05D007999 1.7e-77 293.1 209 76.1
TAR625G0931 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.7e-77 293.1 210 73.3
CSS0005072 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 3.8e-77 292.0 208 69.2
COL.COLO4_11446 Corchorus olitorius HOM05D006615 ORTHO05D007999 3.8e-77 292.0 208 75.5
Sopen02g037800 Solanum pennellii HOM05D006615 ORTHO05D007999 3.8e-77 292.0 209 74.6
Solyc02g093220.3 Solanum lycopersicum HOM05D006615 ORTHO05D007999 6.5e-77 291.2 209 74.2
PGSC0003DMG400004030 Solanum tuberosum HOM05D006615 ORTHO05D007999 6.5e-77 291.2 209 74.2
ECA232G2507 Erigeron canadensis HOM05D002761 ORTHO05D003351 8.5e-77 290.8 173 80.3
Nn5g30349 Nelumbo nucifera HOM05D006615 ORTHO05D007999 8.5e-77 290.8 211 72.5
Nitab4.5_0002694g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 1.4e-76 290.0 209 75.6
CSS0020579 Camellia sinensis var. sinensis HOM05D006615 ORTHO05D007999 1.9e-76 289.7 208 72.1
MSTRG.2870 Avicennia marina HOM05D006615 ORTHO05D007999 2.5e-76 289.3 209 76.1
Oeu014828.1 Olea europaea HOM05D006615 ORTHO05D007999 2.5e-76 289.3 213 74.6
Atru.chr3.300 Acer truncatum HOM05D006615 ORTHO05D007999 4.2e-76 288.5 211 73.0
Gohir.A12G072600 Gossypium hirsutum HOM05D006615 ORTHO05D007999 4.2e-76 288.5 208 75.0
Hma1.2p1_0670F.1_g200450 Hydrangea macrophylla HOM05D006615 ORTHO05D007999 4.2e-76 288.5 208 68.8
Ciclev10026421m.g Citrus clementina HOM05D006615 ORTHO05D007999 5.5e-76 288.1 207 75.8
TAR381G0796 Trochodendron aralioides HOM05D006615 ORTHO05D007999 1.6e-75 286.6 209 73.2
Thecc.01G059100 Theobroma cacao HOM05D006615 ORTHO05D007999 2.1e-75 286.2 208 74.5
Gohir.A02G156700 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.7e-75 285.8 208 74.0
Cc07_g06140 Coffea canephora HOM05D006615 ORTHO05D007999 4.7e-75 285.0 208 73.6
Oeu049899.1 Olea europaea HOM05D006615 ORTHO05D007999 4.7e-75 285.0 211 74.4
Nitab4.5_0002765g0020 Nicotiana tabacum HOM05D006615 ORTHO05D007999 6.1e-75 284.6 209 75.1
CiPaw.01G016200 Carya illinoinensis HOM05D006615 ORTHO05D007999 7.9e-75 284.3 209 66.0
Duzib147G0216 Durio zibethinus HOM05D006615 ORTHO05D007999 7.9e-75 284.3 208 74.0
Prupe.7G131100 Prunus persica HOM05D006615 ORTHO05D007999 7.9e-75 284.3 207 75.4
CsaV3_2G016460 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.0e-74 283.9 207 73.4
MD15G1285700 Malus domestica HOM05D006615 ORTHO05D007999 1.8e-74 283.1 207 74.4
PSO170G0414 Papaver somniferum HOM05D006615 ORTHO05D007999 1.8e-74 283.1 208 67.3
Sabra05G0110900 Salix brachista HOM05D006615 ORTHO05D007999 1.8e-74 283.1 213 73.7
Lsat_1_v5_gn_4_164980 Lactuca sativa HOM05D006615 ORTHO05D007999 2.3e-74 282.7 206 74.3
Manes.12G104500 Manihot esculenta HOM05D006615 ORTHO05D007999 2.3e-74 282.7 208 75.5
MELO3C020856.2 Cucumis melo HOM05D006615 ORTHO05D007999 3.0e-74 282.3 216 70.8
Gorai.003G025500 Gossypium raimondii HOM05D006615 ORTHO05D007999 3.0e-74 282.3 208 73.1
Ah.03g145470 Amaranthus hybridus HOM05D006615 ORTHO05D007999 3.9e-74 282.0 210 65.2
RcHm_v2.0_Chr2g0105951 Rosa chinensis HOM05D006615 ORTHO05D007999 5.1e-74 281.6 207 73.4
ClCG02G012310 Citrullus lanatus HOM05D006615 ORTHO05D007999 6.7e-74 281.2 207 72.9
Cpa.g.sc55.125 Carica papaya HOM05D006615 ORTHO05D007999 8.8e-74 280.8 208 67.3
Migut.H00418 Erythranthe guttata HOM05D006615 ORTHO05D007999 8.8e-74 280.8 213 73.7
Gohir.D03G024000 Gossypium hirsutum HOM05D006615 ORTHO05D007999 2.6e-73 279.3 208 72.6
PSO210G0040 Papaver somniferum HOM05D006615 ORTHO05D007999 3.3e-73 278.9 208 66.3
Sed0009491 Sechium edule HOM05D006615 ORTHO05D007999 3.3e-73 278.9 207 71.5
CDE02G1946 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 4.4e-73 278.5 213 70.4
AUR62001910 Chenopodium quinoa HOM05D006615 ORTHO05D007999 4.4e-73 278.5 208 65.9
FAN26G2627 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.7e-73 278.1 207 72.9
FAN28G0965 Fragaria x ananassa HOM05D006615 ORTHO05D007999 5.7e-73 278.1 207 72.9
Sabra07G0040600 Salix brachista HOM05D006615 ORTHO05D007999 5.7e-73 278.1 208 67.8
FAN23G1998 Fragaria x ananassa HOM05D006615 ORTHO05D007999 7.4e-73 277.7 207 72.5
FvH4_1g16240 Fragaria vesca HOM05D006615 ORTHO05D007999 9.7e-73 277.3 207 72.9
MD02G1174700 Malus domestica HOM05D006615 ORTHO05D007999 1.7e-72 276.6 207 72.9
Potri.005G140000 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.2e-72 276.2 208 73.1
CDE04G2757 Ceratophyllum demersum HOM05D006615 ORTHO05D007999 2.8e-72 275.8 213 69.5
AUR62003898 Chenopodium quinoa HOM05D006615 ORTHO05D007999 3.7e-72 275.4 208 64.9
TPR.G26907 Trifolium pratense HOM05D006615 ORTHO05D007999 6.3e-72 274.6 208 66.8
FAN19G1431 Fragaria x ananassa HOM05D006615 ORTHO05D007999 1.8e-71 273.1 207 72.5
Psat2g167840 Pisum sativum HOM05D006615 ORTHO05D007999 3.1e-71 272.3 208 65.9
Hund16348 Selenicereus undatus HOM05D006615 ORTHO05D007999 3.5e-70 268.9 259 54.4
Lalb_Chr16g0378591 Lupinus albus HOM05D006615 ORTHO05D007999 4.5e-70 268.5 208 71.2
THA.LOC104821250 Tarenaya hassleriana HOM05D006615 ORTHO05D007999 4.5e-70 268.5 208 71.2
Sc03g0001700 Simmondsia chinensis HOM05D006615 ORTHO05D007999 7.7e-70 267.7 207 62.8
Medtr5g016890 Medicago truncatula HOM05D006615 ORTHO05D007999 1.7e-69 266.5 208 68.8
DCAR_010880 Daucus carota HOM05D006615 ORTHO05D007999 2.2e-69 266.2 213 66.7
HPP92_026439 Vanilla planifolia HOM05D006615 ORTHO05D007999 5.0e-69 265.0 207 68.6
BcaB02g09933 Brassica carinata HOM05D006615 ORTHO05D007999 6.5e-69 264.6 209 68.4
AL8G44220 Arabidopsis lyrata HOM05D006615 ORTHO05D007999 8.5e-69 264.2 209 68.4
Cfa004036 Carpinus fangiana HOM05D006615 ORTHO05D007999 1.1e-68 263.8 192 75.5
Thhalv10004869m.g Eutrema salsugineum HOM05D006615 ORTHO05D007999 1.1e-68 263.8 207 68.6
AT5G67140 Arabidopsis thaliana HOM05D006615 ORTHO05D007999 1.9e-68 263.1 209 68.4
BraA07t29407Z Brassica rapa HOM05D006615 ORTHO05D007999 1.9e-68 263.1 209 67.5
arahy.Tifrunner.gnm1.ann1.XJ9ES7 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.5e-68 262.7 208 70.2
C07p24600 Brassica napus HOM05D006615 ORTHO05D007999 3.2e-68 262.3 208 67.8
BolC7t42980H Brassica oleracea HOM05D006615 ORTHO05D007999 3.2e-68 262.3 208 67.8
ATR0800G077 Amborella trichopoda HOM05D006615 ORTHO05D007999 7.2e-68 261.2 210 67.6
A07p16820 Brassica napus HOM05D006615 ORTHO05D007999 7.2e-68 261.2 209 67.0
CARHR280510 Cardamine hirsuta HOM05D006615 ORTHO05D007999 7.2e-68 261.2 209 67.9
TWI09G1033 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 7.2e-68 261.2 217 59.4
Carub.0008s2737 Capsella rubella HOM05D006615 ORTHO05D007999 1.6e-67 260.0 209 67.0
Glyma.01G187800 Glycine max HOM05D006615 ORTHO05D007999 1.6e-67 260.0 164 76.2
arahy.Tifrunner.gnm1.ann1.8K3JW9 Arachis hypogaea HOM05D006615 ORTHO05D007999 2.1e-67 259.6 208 69.7
Lj2g0018871 Lotus japonicus HOM05D006615 ORTHO05D007999 4.7e-67 258.5 206 68.4
Glyma.11G054300 Glycine max HOM05D006615 ORTHO05D007999 6.1e-67 258.1 208 68.3
Sp2g29550 Schrenkiella parvula HOM05D006615 ORTHO05D007999 6.1e-67 258.1 207 67.6
Lalb_Chr05g0213321 Lupinus albus HOM05D006615 ORTHO05D007999 1.4e-66 256.9 208 61.1
MELO3C020857.2 Cucumis melo HOM05D006615 ORTHO05D007999 5.2e-66 255.0 205 68.8
Atru.chr3.288 Acer truncatum HOM05D006615 ORTHO05D007999 6.7e-66 254.6 208 67.8
Oeu017456.1 Olea europaea HOM05D006615 ORTHO05D007999 6.7e-66 254.6 211 66.8
Aa31LG1G15650 Aethionema arabicum HOM05D006615 ORTHO05D007999 2.6e-65 252.7 208 64.9
Phvul.002G017400 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 3.3e-65 252.3 208 65.9
Eucgr.H01687 Eucalyptus grandis HOM05D006615 ORTHO05D007999 5.7e-65 251.5 208 58.7
CsaV3_2G016470 Cucumis sativus L. HOM05D006615 ORTHO05D007999 1.7e-64 250.0 205 66.8
VMungo1215G1750 Vigna mungo HOM05D006615 ORTHO05D007999 4.8e-64 248.4 208 66.8
Actinidia36482 Actinidia chinensis HOM05D006615 ORTHO05D007999 2.0e-62 243.0 181 70.2
SEGI_10636 Sequoiadendron giganteum HOM05D006615 ORTHO05D007999 4.5e-62 241.9 215 60.9
Os06g0166000 Oryza sativa ssp. japonica HOM05D006615 ORTHO05D007999 8.0e-59 231.1 207 54.1
Zm00001eb375600 Zea mays HOM05D006615 ORTHO05D007999 2.3e-58 229.6 207 55.1
CANSAT01G0297 Cannabis sativa HOM05D006615 ORTHO05D007999 1.2e-54 217.2 207 56.0
unitig_748.g8604 Utricularia gibba HOM05D002191 ORTHO05D007999 8.0e-51 204.5 178 59.0
SGA_v2.0_scaffold15G07326 Striga asiatica HOM05D006615 ORTHO05D007999 2.2e-48 196.4 209 59.3
Mapoly0005s0095 Marchantia polymorpha HOM05D006615 ORTHO05D007999 6.3e-48 194.9 166 56.0
Pp3c7_15700 Physcomitrium patens HOM05D006615 ORTHO05D007999 9.2e-47 191.0 158 59.5
AagrBONN_evm.TU.Sc2ySwM_344.5234 Anthoceros agrestis HOM05D006615 ORTHO05D007999 1.5e-41 173.7 170 51.2
Aqoxy6G01271 Aquilegia oxysepala HOM05D006615 ORTHO05D007999 3.4e-41 172.6 210 51.4
TWI73G1298 Tripterygium wilfordii HOM05D006615 ORTHO05D007999 5.4e-39 165.2 136 58.1
SMO164G0246 Selaginella moellendorffii HOM05D006615 ORTHO05D007999 2.1e-35 153.3 163 47.2
Potri.007G045601 Populus trichocarpa HOM05D006615 ORTHO05D007999 2.9e-32 142.9 97 74.2
MSTRG.3434 Avicennia marina HOM05D006615 ORTHO05D007999 2.0e-17 93.6 86 69.8
ClCG02G012330 Citrullus lanatus HOM05D006615 ORTHO05D007999 2.9e-16 89.7 78 55.1
Phvul.008G146300 Phaseolus vulgaris HOM05D006615 ORTHO05D007999 5.1e-13 79.0 53 67.9
FAN20G2926 Fragaria x ananassa HOM05D002813 ORTHO05D003203 1.3e-08 64.3 112 36.6
FAN15G1401 Fragaria x ananassa HOM05D002813 ORTHO05D003203 8.4e-08 61.6 108 36.1
EL10Ac6g15726 Beta vulgaris HOM05D006615 ORTHO05D007999 1.4e-07 60.8 93 40.9
FvH4_2g32590 Fragaria vesca HOM05D002813 ORTHO05D003203 4.2e-07 59.3 109 35.8
FAN24G0821 Fragaria x ananassa HOM05D002813 ORTHO05D003203 4.2e-07 59.3 109 35.8
BcaC07g42481 Brassica carinata HOM05D000710 ORTHO05D000336 1.6e-06 57.4 161 28.6
RcHm_v2.0_Chr3g0487451 Rosa chinensis HOM05D032618 ORTHO05D007999 2.1e-06 57.0 39 66.7
FvH4_2g32511 Fragaria vesca HOM05D002813 ORTHO05D003203 3.5e-06 56.2 143 29.4
FAN24G2117 Fragaria x ananassa HOM05D002813 ORTHO05D003203 3.5e-06 56.2 143 29.4
FAN24G2983 Fragaria x ananassa HOM05D002813 ORTHO05D003203 6.0e-06 55.5 165 25.5


User provided reference genes

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