Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C149T5 Lonicera japonica HOM05D002093 ORTHO05D003877 1.6e-56 222.6 118 100.0
Migut.H00432 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.7e-26 122.9 85 80.0
Migut.K00766 Erythranthe guttata HOM05D002093 ORTHO05D003877 1.0e-23 113.6 85 74.1
Actinidia12051 Actinidia chinensis HOM05D002093 ORTHO05D003877 1.3e-23 113.2 103 66.0
MSTRG.15388 Avicennia marina HOM05D002093 ORTHO05D003877 1.3e-23 113.2 85 75.3
Oeu018957.1 Olea europaea HOM05D002093 ORTHO05D003877 1.3e-23 113.2 103 68.0
Oeu031526.1 Olea europaea HOM05D002093 ORTHO05D003877 1.3e-23 113.2 120 64.2
Oeu031527.1 Olea europaea HOM05D002093 ORTHO05D003877 1.3e-23 113.2 120 64.2
Oeu031528.1 Olea europaea HOM05D002093 ORTHO05D003877 1.3e-23 113.2 120 64.2
MSTRG.23745 Avicennia marina HOM05D002093 ORTHO05D003877 3.0e-23 112.1 85 72.9
MSTRG.2884 Avicennia marina HOM05D002093 ORTHO05D003877 5.1e-23 111.3 85 72.9
Actinidia36495 Actinidia chinensis HOM05D002093 ORTHO05D003877 8.7e-23 110.5 117 60.7
SalBow1G1545 Salvia bowleyana HOM05D002093 ORTHO05D003877 8.7e-23 110.5 85 71.8
HanXRQChr15g0490521 Helianthus annuus HOM05D002093 ORTHO05D003877 1.1e-22 110.2 103 66.0
Potri.005G138300 Populus trichocarpa HOM05D002093 ORTHO05D003877 1.1e-22 110.2 85 70.6
MSTRG.3425 Avicennia marina HOM05D002093 ORTHO05D003877 1.5e-22 109.8 85 71.8
Hma1.2p1_1705F.1_g298390 Hydrangea macrophylla HOM05D002093 ORTHO05D003877 1.5e-22 109.8 85 74.1
ECA232G3993 Erigeron canadensis HOM05D002093 ORTHO05D003877 1.9e-22 109.4 103 66.0
Lj7A69T48 Lonicera japonica HOM05D002093 ORTHO05D003877 2.5e-22 109.0 103 68.0
Sabra07G0038900 Salix brachista HOM05D002093 ORTHO05D003877 3.3e-22 108.6 103 65.0
Dinv39847 Davidia involucrata HOM05D002093 ORTHO05D003877 4.3e-22 108.2 103 66.0
Actinidia16482 Actinidia chinensis HOM05D002093 ORTHO05D003877 7.3e-22 107.5 103 65.0
Lsat_1_v5_gn_4_166281 Lactuca sativa HOM05D002093 ORTHO05D003877 7.3e-22 107.5 103 65.0
Peaxi162Scf00450g00035 Petunia axillaris HOM05D002093 ORTHO05D003877 7.3e-22 107.5 103 65.0
HanXRQChr09g0263831 Helianthus annuus HOM05D002093 ORTHO05D003877 1.3e-21 106.7 103 65.0
Ciclev10025785m.g Citrus clementina HOM05D002093 ORTHO05D003877 2.1e-21 105.9 103 66.0
Oeu031954.1 Olea europaea HOM05D002093 ORTHO05D003877 2.1e-21 105.9 103 66.0
PGSC0003DMG400004041 Solanum tuberosum HOM05D002093 ORTHO05D003877 2.8e-21 105.5 103 65.0
Potri.007G044200 Populus trichocarpa HOM05D002093 ORTHO05D003877 3.6e-21 105.1 103 63.1
TWI09G1584 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 4.8e-21 104.8 85 70.6
Nitab4.5_0002016g0100 Nicotiana tabacum HOM05D002093 ORTHO05D003877 6.2e-21 104.4 103 65.0
DCAR_025734 Daucus carota HOM05D002093 ORTHO05D003877 1.1e-20 103.6 103 65.0
FvH4_1g16070 Fragaria vesca HOM05D002093 ORTHO05D003877 1.1e-20 103.6 107 64.5
FAN19G2882 Fragaria x ananassa HOM05D002093 ORTHO05D003877 1.1e-20 103.6 107 64.5
FAN26G2318 Fragaria x ananassa HOM05D002093 ORTHO05D003877 1.1e-20 103.6 107 64.5
Manes.12G106900 Manihot esculenta HOM05D002093 ORTHO05D003877 1.1e-20 103.6 103 64.1
Solyc02g090870.1 Solanum lycopersicum HOM05D002093 ORTHO05D003877 1.1e-20 103.6 103 64.1
Sopen02g035520 Solanum pennellii HOM05D002093 ORTHO05D003877 1.1e-20 103.6 103 64.1
CiPaw.02G008200 Carya illinoinensis HOM05D002093 ORTHO05D003877 1.4e-20 103.2 103 64.1
QL06p041362 Quercus lobata HOM05D002093 ORTHO05D003877 1.4e-20 103.2 103 60.2
SGA_v2.0_scaffold15G07304 Striga asiatica HOM05D002093 ORTHO05D003877 1.4e-20 103.2 118 60.2
RcHm_v2.0_Chr2g0105691 Rosa chinensis HOM05D002093 ORTHO05D003877 1.8e-20 102.8 107 64.5
Sabra05G0112200 Salix brachista HOM05D002093 ORTHO05D003877 1.8e-20 102.8 103 61.2
AT5G67020 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 2.4e-20 102.4 85 68.2
FAN28G1260 Fragaria x ananassa HOM05D002093 ORTHO05D003877 2.4e-20 102.4 107 63.6
FAN23G2320 Fragaria x ananassa HOM05D002093 ORTHO05D003877 3.1e-20 102.1 107 63.6
PGR102G1838 Punica granatum HOM05D002093 ORTHO05D003877 3.1e-20 102.1 85 69.4
CiPaw.01G018000 Carya illinoinensis HOM05D002093 ORTHO05D003877 4.0e-20 101.7 103 62.1
Cc07_g06000 Coffea canephora HOM05D002093 ORTHO05D003877 4.0e-20 101.7 106 62.3
Nitab4.5_0002440g0020 Nicotiana tabacum HOM05D002093 ORTHO05D003877 4.0e-20 101.7 103 64.1
TAR628G1162 Trochodendron aralioides HOM05D002093 ORTHO05D003877 5.3e-20 101.3 103 61.2
Aqoxy6G01309 Aquilegia oxysepala HOM05D002093 ORTHO05D003877 9.0e-20 100.5 85 63.5
Rhsim08G0100300 Rhododendron simsii HOM05D002093 ORTHO05D003877 1.2e-19 100.1 109 61.5
arahy.Tifrunner.gnm1.ann1.6LZ9WW Arachis hypogaea HOM05D002093 ORTHO05D003877 1.5e-19 99.8 85 67.1
MD02G1172200 Malus domestica HOM05D002093 ORTHO05D003877 1.5e-19 99.8 108 61.1
Manes.13G124200 Manihot esculenta HOM05D002093 ORTHO05D003877 1.5e-19 99.8 103 60.2
arahy.Tifrunner.gnm1.ann1.R7X80S Arachis hypogaea HOM05D002093 ORTHO05D003877 2.0e-19 99.4 85 65.9
CARHR159800 Cardamine hirsuta HOM05D002093 ORTHO05D003877 2.0e-19 99.4 85 67.1
Carub.0005s1665 Capsella rubella HOM05D002093 ORTHO05D003877 2.6e-19 99.0 85 67.1
THA.LOC104827141 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 2.6e-19 99.0 85 65.9
Lalb_Chr09g0323191 Lupinus albus HOM05D002093 ORTHO05D003877 3.4e-19 98.6 85 65.9
Cfa004024 Carpinus fangiana HOM05D002093 ORTHO05D003877 4.5e-19 98.2 103 61.2
Haze_15397 Corylus avellana HOM05D002093 ORTHO05D003877 4.5e-19 98.2 103 61.2
AT3G50340 Arabidopsis thaliana HOM05D002093 ORTHO05D003877 5.8e-19 97.8 85 65.9
CSS0045673 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 5.8e-19 97.8 105 61.0
Prupe.7G133200 Prunus persica HOM05D002093 ORTHO05D003877 5.8e-19 97.8 109 61.5
AL5G30460 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 7.6e-19 97.4 85 65.9
arahy.Tifrunner.gnm1.ann1.31X1J3 Arachis hypogaea HOM05D002093 ORTHO05D003877 7.6e-19 97.4 105 60.0
MD15G1284400 Malus domestica HOM05D002093 ORTHO05D003877 7.6e-19 97.4 108 59.3
TWI73G0884 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 7.6e-19 97.4 103 62.1
arahy.Tifrunner.gnm1.ann1.KYX91V Arachis hypogaea HOM05D002093 ORTHO05D003877 9.9e-19 97.1 105 60.0
Thhalv10010424m.g Eutrema salsugineum HOM05D002093 ORTHO05D003877 9.9e-19 97.1 85 64.7
Eucgr.I00924 Eucalyptus grandis HOM05D002093 ORTHO05D003877 1.3e-18 96.7 103 58.3
Gohir.D03G023700 Gossypium hirsutum HOM05D002093 ORTHO05D003877 1.3e-18 96.7 85 62.4
Gorai.003G025200 Gossypium raimondii HOM05D002093 ORTHO05D003877 1.3e-18 96.7 85 62.4
Sed0009898 Sechium edule HOM05D002093 ORTHO05D003877 1.3e-18 96.7 103 57.3
Cpa.g.sc55.147 Carica papaya HOM05D002093 ORTHO05D003877 1.7e-18 96.3 103 59.2
ClCG01G016830 Citrullus lanatus HOM05D002093 ORTHO05D003877 1.7e-18 96.3 103 58.3
THA.LOC104821255 Tarenaya hassleriana HOM05D002093 ORTHO05D003877 1.7e-18 96.3 85 63.5
AL8G44340 Arabidopsis lyrata HOM05D002093 ORTHO05D003877 2.2e-18 95.9 115 56.5
Gohir.D12G069400 Gossypium hirsutum HOM05D002093 ORTHO05D003877 2.2e-18 95.9 104 61.5
Gorai.008G076000 Gossypium raimondii HOM05D002093 ORTHO05D003877 2.2e-18 95.9 104 61.5
CANSAT01G0818 Cannabis sativa HOM05D002093 ORTHO05D003877 2.9e-18 95.5 107 57.9
Lalb_Chr16g0378551 Lupinus albus HOM05D002093 ORTHO05D003877 2.9e-18 95.5 103 59.2
Psat2g167200 Pisum sativum HOM05D002093 ORTHO05D003877 2.9e-18 95.5 103 56.3
A01p24190 Brassica napus HOM05D002093 ORTHO05D003877 3.8e-18 95.1 85 64.7
BraA01t02331Z Brassica rapa HOM05D002093 ORTHO05D003877 3.8e-18 95.1 85 64.7
MELO3C020873.2 Cucumis melo HOM05D002093 ORTHO05D003877 3.8e-18 95.1 103 60.2
CsaV3_2G016640 Cucumis sativus L. HOM05D002093 ORTHO05D003877 3.8e-18 95.1 103 60.2
unitig_899.g14664 Utricularia gibba HOM05D002093 ORTHO05D003877 3.8e-18 95.1 85 63.5
BcaC07g39493 Brassica carinata HOM05D002093 ORTHO05D003877 4.9e-18 94.7 85 64.7
A09p43350 Brassica napus HOM05D002093 ORTHO05D003877 4.9e-18 94.7 85 64.7
C08p25380 Brassica napus HOM05D002093 ORTHO05D003877 4.9e-18 94.7 85 64.7
BolC8t50159H Brassica oleracea HOM05D002093 ORTHO05D003877 4.9e-18 94.7 85 64.7
BraA09t39804Z Brassica rapa HOM05D002093 ORTHO05D003877 4.9e-18 94.7 85 64.7
CARHR280640 Cardamine hirsuta HOM05D002093 ORTHO05D003877 4.9e-18 94.7 86 64.0
COL.COLO4_11417 Corchorus olitorius HOM05D002093 ORTHO05D003877 4.9e-18 94.7 104 60.6
Lj4g0019433 Lotus japonicus HOM05D002093 ORTHO05D003877 6.4e-18 94.4 85 62.4
Sp5g11850 Schrenkiella parvula HOM05D002093 ORTHO05D003877 6.4e-18 94.4 85 63.5
MELO3C000152.2 Cucumis melo HOM05D002093 ORTHO05D003877 8.4e-18 94.0 103 57.3
Duzib187G1344 Durio zibethinus HOM05D002093 ORTHO05D003877 8.4e-18 94.0 104 61.5
Thecc.01G056400 Theobroma cacao HOM05D002093 ORTHO05D003877 8.4e-18 94.0 104 60.6
Gohir.A02G157200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 1.1e-17 93.6 112 54.5
Sed0011926 Sechium edule HOM05D002093 ORTHO05D003877 1.1e-17 93.6 103 56.3
ClCG02G012510 Citrullus lanatus HOM05D002093 ORTHO05D003877 1.9e-17 92.8 103 59.2
CsaV3_6G043270 Cucumis sativus L. HOM05D002093 ORTHO05D003877 1.9e-17 92.8 103 56.3
PSO675G7228 Papaver somniferum HOM05D002093 ORTHO05D003877 1.9e-17 92.8 88 60.2
BcaB05g23211 Brassica carinata HOM05D002093 ORTHO05D003877 2.4e-17 92.4 85 63.5
Gohir.A12G070900 Gossypium hirsutum HOM05D002093 ORTHO05D003877 2.4e-17 92.4 104 59.6
TPR.G30703 Trifolium pratense HOM05D002093 ORTHO05D003877 2.4e-17 92.4 106 58.5
Aa31LG4G18570 Aethionema arabicum HOM05D002093 ORTHO05D003877 3.2e-17 92.0 103 59.2
TAR625G0453 Trochodendron aralioides HOM05D002093 ORTHO05D003877 3.2e-17 92.0 103 56.3
CAN.G660.8 Capsicum annuum HOM05D002093 ORTHO05D003877 4.2e-17 91.7 103 60.2
Duzib147G0327 Durio zibethinus HOM05D002093 ORTHO05D003877 5.4e-17 91.3 104 59.6
Rhsim10G0117500 Rhododendron simsii HOM05D002093 ORTHO05D003877 5.4e-17 91.3 111 53.2
TWI53G0455 Tripterygium wilfordii HOM05D002093 ORTHO05D003877 5.4e-17 91.3 103 59.2
TAR381G1348 Trochodendron aralioides HOM05D002093 ORTHO05D003877 5.4e-17 91.3 103 55.3
Eucgr.H02035 Eucalyptus grandis HOM05D002093 ORTHO05D003877 7.1e-17 90.9 103 53.4
Gohir.A11G192500 Gossypium hirsutum HOM05D002093 ORTHO05D003877 7.1e-17 90.9 103 58.3
Gohir.D11G199200 Gossypium hirsutum HOM05D002093 ORTHO05D003877 7.1e-17 90.9 103 58.3
Gorai.007G213400 Gossypium raimondii HOM05D002093 ORTHO05D003877 7.1e-17 90.9 103 58.3
Lj2g0008573 Lotus japonicus HOM05D002093 ORTHO05D003877 7.1e-17 90.9 103 52.4
Ca_22163_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 9.3e-17 90.5 85 60.0
PSO541G0340 Papaver somniferum HOM05D002093 ORTHO05D003877 9.3e-17 90.5 88 59.1
SalBow5G0755 Salvia bowleyana HOM05D002093 ORTHO05D003877 1.2e-16 90.1 121 57.0
SalBow5G4513 Salvia bowleyana HOM05D002093 ORTHO05D003877 1.2e-16 90.1 121 57.0
BcaC06g34779 Brassica carinata HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 60.0
BcaC09g50022 Brassica carinata HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 62.4
C01p29900 Brassica napus HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 62.4
C07p24720 Brassica napus HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 60.0
C07p24730 Brassica napus HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 60.0
BolC1t02932H Brassica oleracea HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 62.4
BolC7t42993H Brassica oleracea HOM05D002093 ORTHO05D003877 1.6e-16 89.7 85 60.0
Glyma.11G055900 Glycine max HOM05D002093 ORTHO05D003877 1.6e-16 89.7 103 58.3
PSO210G1107 Papaver somniferum HOM05D002093 ORTHO05D003877 1.6e-16 89.7 103 56.3
Phvul.002G018800 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 1.6e-16 89.7 103 58.3
PGR004G1935 Punica granatum HOM05D002093 ORTHO05D003877 1.6e-16 89.7 103 54.4
VMungo1215G2131 Vigna mungo HOM05D002093 ORTHO05D003877 2.1e-16 89.4 103 57.3
AUR62001927 Chenopodium quinoa HOM05D002093 ORTHO05D003877 2.7e-16 89.0 103 57.3
BcaB01g00624 Brassica carinata HOM05D002093 ORTHO05D003877 3.5e-16 88.6 85 62.4
Glyma.01G186100 Glycine max HOM05D002093 ORTHO05D003877 3.5e-16 88.6 103 57.3
Sc03g0001590 Simmondsia chinensis HOM05D002093 ORTHO05D003877 3.5e-16 88.6 103 56.3
A07p16910 Brassica napus HOM05D002093 ORTHO05D003877 4.6e-16 88.2 85 58.8
Sp2g29650 Schrenkiella parvula HOM05D002093 ORTHO05D003877 4.6e-16 88.2 85 62.4
MBI03_g13471_MAGBIO Magnolia biondii HOM05D002093 ORTHO05D003877 6.0e-16 87.8 103 55.3
PSO170G6176 Papaver somniferum HOM05D002093 ORTHO05D003877 7.9e-16 87.4 103 55.3
unitig_899.g14941 Utricularia gibba HOM05D002093 ORTHO05D003877 7.9e-16 87.4 103 56.3
BraA07t29417Z Brassica rapa HOM05D002093 ORTHO05D003877 1.0e-15 87.0 85 57.6
Ah.02g124300 Amaranthus hybridus HOM05D002093 ORTHO05D003877 3.0e-15 85.5 103 55.3
Medtr5g017410 Medicago truncatula HOM05D002093 ORTHO05D003877 3.9e-15 85.1 103 53.4
Psat0s1281g0040 Pisum sativum HOM05D002093 ORTHO05D003877 6.7e-15 84.3 87 58.6
Sed0000549 Sechium edule HOM05D002093 ORTHO05D003877 6.7e-15 84.3 105 55.2
Aa31LG1G15550 Aethionema arabicum HOM05D002093 ORTHO05D003877 1.1e-14 83.6 85 58.8
Carub.0008s2748 Capsella rubella HOM05D002093 ORTHO05D003877 1.5e-14 83.2 85 58.8
CDE04G2094 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 1.6e-13 79.7 103 48.5
Ca_24769_v3 Cicer arietinum L. HOM05D002093 ORTHO05D003877 2.1e-13 79.3 78 59.0
Os08g0472400 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 2.1e-13 79.3 104 53.8
CDE03G0206 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 4.8e-13 78.2 103 48.5
Zm00001eb314880 Zea mays HOM05D002093 ORTHO05D003877 6.2e-13 77.8 87 55.2
HPP92_016719 Vanilla planifolia HOM05D002093 ORTHO05D003877 8.1e-13 77.4 103 52.4
Zm00001eb038030 Zea mays HOM05D002093 ORTHO05D003877 8.1e-13 77.4 104 53.8
BcaC06g34778 Brassica carinata HOM05D002093 ORTHO05D003877 1.4e-12 76.6 85 51.8
AUR62003883 Chenopodium quinoa HOM05D002093 ORTHO05D003877 1.4e-12 76.6 96 54.2
GSVIVG01022129001 Vitis vinifera HOM05D002093 ORTHO05D003877 2.4e-12 75.9 87 58.6
Os09g0456700 Oryza sativa ssp. japonica HOM05D002093 ORTHO05D003877 6.9e-12 74.3 87 50.6
Zm00001eb176690 Zea mays HOM05D002093 ORTHO05D003877 6.9e-12 74.3 102 52.9
EL10Ac6g15743 Beta vulgaris HOM05D002093 ORTHO05D003877 2.0e-11 72.8 96 54.2
CSS0014053 Camellia sinensis var. sinensis HOM05D002093 ORTHO05D003877 2.9e-10 68.9 104 51.0
Glyma.05G095666 Glycine max HOM05D002093 ORTHO05D003877 8.4e-10 67.4 79 51.9
Glyma.17G174600 Glycine max HOM05D002093 ORTHO05D003877 1.4e-09 66.6 74 56.8
ATR0009G029 Amborella trichopoda HOM05D002093 ORTHO05D003877 1.9e-09 66.2 108 46.3
CDE04G2505 Ceratophyllum demersum HOM05D002093 ORTHO05D003877 1.6e-08 63.2 86 43.0
Phvul.003G243900 Phaseolus vulgaris HOM05D002093 ORTHO05D003877 1.6e-08 63.2 60 60.0
VMungo0251G2600 Vigna mungo HOM05D002093 ORTHO05D003877 1.6e-08 63.2 60 60.0
Atru.chr3.326 Acer truncatum HOM05D002093 ORTHO05D003877 1.8e-07 59.7 71 54.9
Zm00001eb019300 Zea mays HOM05D002093 ORTHO05D003877 5.6e-06 54.7 86 48.8


User provided reference genes

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