Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C132T5 Lonicera japonica HOM05D000003 ORTHO05D000004 3.3e-109 398.3 188 100.0
Lj4C747T2 Lonicera japonica HOM05D000003 ORTHO05D000004 7.8e-26 121.3 265 32.8
Lju926C12G8 Lonicera japonica HOM05D000003 ORTHO05D000004 1.5e-13 80.5 219 28.3
CANSAT64G1654 Cannabis sativa HOM05D000003 ORTHO05D000004 7.6e-13 78.2 185 28.1
CANSAT35G0748 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-12 77.4 224 25.4
CANSAT54G1259 Cannabis sativa HOM05D000003 ORTHO05D000004 2.9e-12 76.3 244 27.0
Lj8C225G9 Lonicera japonica HOM05D000003 ORTHO05D000004 6.4e-12 75.1 161 27.3
CANSAT35G0654 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-11 73.6 178 30.3
Lj4C754G7 Lonicera japonica HOM05D000003 ORTHO05D000167 2.4e-11 73.2 141 32.6
CANSAT11G2606 Cannabis sativa HOM05D000003 ORTHO05D000167 3.2e-11 72.8 236 24.6
CANSAT25G2525 Cannabis sativa HOM05D000003 ORTHO05D000004 4.2e-11 72.4 277 24.9
Lj9P2T15 Lonicera japonica HOM05D000003 ORTHO05D000167 4.2e-11 72.4 73 42.5
CANSAT64G0662 Cannabis sativa HOM05D000003 ORTHO05D000004 7.1e-11 71.6 228 27.2
CANSAT25G0899 Cannabis sativa HOM05D000003 ORTHO05D000167 1.2e-10 70.9 211 23.7
CANSAT25G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-10 70.5 250 26.0
Lju897C2T1 Lonicera japonica HOM05D000003 ORTHO05D000126 2.1e-10 70.1 135 28.9
CANSAT54G0374 Cannabis sativa HOM05D000003 ORTHO05D000004 7.9e-10 68.2 66 50.0
Lj9C481T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.3e-09 67.4 191 24.1
CANSAT11G2463 Cannabis sativa HOM05D000003 ORTHO05D000004 2.3e-09 66.6 111 35.1
CANSAT25G2690 Cannabis sativa HOM05D000003 ORTHO05D000004 3.9e-09 65.9 262 24.0
Lj1P1179T15 Lonicera japonica HOM05D000003 ORTHO05D000004 3.9e-09 65.9 72 38.9
Lj6P349T18 Lonicera japonica HOM05D000003 ORTHO05D000004 3.9e-09 65.9 81 40.7
CANSAT21G0999 Cannabis sativa HOM05D000003 ORTHO05D000004 5.1e-09 65.5 119 35.3
CANSAT56G1241 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-09 65.1 111 35.1
CANSAT78G1434 Cannabis sativa HOM05D000003 ORTHO05D000004 6.7e-09 65.1 249 23.7
CANSAT11G1229 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 63.9 106 34.9
CANSAT64G1612 Cannabis sativa HOM05D000003 ORTHO05D000004 1.5e-08 63.9 109 35.8
CANSAT25G0690 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.5 111 34.2
CANSAT35G1274 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.5 236 25.0
CANSAT54G0092 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.5 111 34.2
CANSAT56G1890 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.5 111 33.3
CANSAT56G2299 Cannabis sativa HOM05D000003 ORTHO05D000004 1.9e-08 63.5 220 25.5
Lj1C222T2 Lonicera japonica HOM05D000003 ORTHO05D000004 1.9e-08 63.5 199 26.1
CANSAT64G1929 Cannabis sativa HOM05D000003 ORTHO05D000004 3.3e-08 62.8 111 33.3
Lj7C413G9 Lonicera japonica HOM05D000104 ORTHO05D004363 4.3e-08 62.4 67 38.8
CANSAT01G1615 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-08 62.0 111 33.3
CANSAT11G0196 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-08 62.0 111 31.5
CANSAT25G1030 Cannabis sativa HOM05D000003 ORTHO05D000004 5.6e-08 62.0 100 40.0
CANSAT64G2436 Cannabis sativa HOM05D000003 ORTHO05D000167 5.6e-08 62.0 111 34.2
CANSAT01G2780 Cannabis sativa HOM05D000003 ORTHO05D000004 7.4e-08 61.6 106 33.0
CANSAT01G0780 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-08 61.2 111 31.5
CANSAT56G1931 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-08 61.2 106 34.9
CANSAT64G0596 Cannabis sativa HOM05D000003 ORTHO05D000167 9.6e-08 61.2 214 26.6
CANSAT64G1009 Cannabis sativa HOM05D000003 ORTHO05D000004 9.6e-08 61.2 106 33.0
AUR62040533 Chenopodium quinoa HOM05D000102 ORTHO05D000006 9.6e-08 61.2 178 28.1
CANSAT11G1313 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 110 32.7
CANSAT35G1969 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 204 23.0
CANSAT64G0360 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 111 32.4
CANSAT78G0999 Cannabis sativa HOM05D000003 ORTHO05D000004 1.3e-07 60.8 93 34.4
CANSAT01G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 96 36.5
CANSAT11G0192 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 110 32.7
CANSAT21G2319 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 246 23.6
CANSAT25G1225 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 110 32.7
CANSAT35G1149 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 109 33.9
CANSAT78G2124 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 241 24.5
CANSAT78G2288 Cannabis sativa HOM05D000003 ORTHO05D000004 1.6e-07 60.5 111 34.2
CANSAT11G0789 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 60.1 115 33.9
CANSAT54G2704 Cannabis sativa HOM05D000003 ORTHO05D000167 2.1e-07 60.1 75 41.3
CANSAT64G0625 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 60.1 105 32.4
CANSAT80G1423 Cannabis sativa HOM05D000003 ORTHO05D000004 2.1e-07 60.1 111 33.3
CANSAT56G2204 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 111 31.5
CANSAT56G2689 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 111 32.4
CANSAT64G0189 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 111 36.0
CANSAT80G2601 Cannabis sativa HOM05D000003 ORTHO05D000004 2.8e-07 59.7 111 34.2
CANSAT64G1781 Cannabis sativa HOM05D000003 ORTHO05D000004 3.7e-07 59.3 111 33.3
Ah.04g151800 Amaranthus hybridus HOM05D000003 ORTHO05D000004 4.8e-07 58.9 110 33.6
CANSAT35G0169 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-07 58.9 106 32.1
CANSAT80G0405 Cannabis sativa HOM05D000003 ORTHO05D000004 4.8e-07 58.9 111 32.4
Lj6A354G19 Lonicera japonica HOM05D018958 ORTHO05D000167 4.8e-07 58.9 146 29.5
Lj2P382T20 Lonicera japonica HOM05D018958 ORTHO05D000167 6.2e-07 58.5 66 37.9
Manes.09G042601 Manihot esculenta HOM05D000003 ORTHO05D000004 6.2e-07 58.5 78 39.7
CANSAT35G0480 Cannabis sativa HOM05D000003 ORTHO05D000004 8.1e-07 58.2 109 33.0
CANSAT11G1770 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 113 32.7
CANSAT35G1937 Cannabis sativa HOM05D000003 ORTHO05D000004 1.1e-06 57.8 111 34.2
Lj8C26T8 Lonicera japonica HOM05D000003 ORTHO05D000004 1.1e-06 57.8 66 33.3
CANSAT01G1644 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 113 32.7
CANSAT01G3218 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 111 31.5
CANSAT21G2012 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 111 31.5
CANSAT25G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 94 34.0
CANSAT54G1106 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 111 31.5
CANSAT56G1552 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 110 31.8
CANSAT64G0369 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 94 34.0
CANSAT80G0997 Cannabis sativa HOM05D000003 ORTHO05D000004 1.4e-06 57.4 93 33.3
Lj5P109T70 Lonicera japonica HOM05D014440 ORTHO05D000167 1.4e-06 57.4 67 35.8
Lj5P270T39 Lonicera japonica HOM05D000003 ORTHO05D000004 1.4e-06 57.4 69 39.1
Manes.01G063949 Manihot esculenta HOM05D000003 ORTHO05D000004 1.4e-06 57.4 98 31.6
CANSAT21G0949 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 57.0 110 31.8
CANSAT35G1728 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 57.0 104 33.7
CANSAT56G0158 Cannabis sativa HOM05D000003 ORTHO05D000004 1.8e-06 57.0 98 32.7
Potri.002G000350 Populus trichocarpa HOM05D000003 ORTHO05D000006 1.8e-06 57.0 81 37.0
CANSAT11G2283 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.6 106 31.1
CANSAT21G1723 Cannabis sativa HOM05D000003 ORTHO05D000004 2.4e-06 56.6 104 30.8
Cpa.g.sc56.85 Carica papaya HOM05D000003 ORTHO05D000004 2.4e-06 56.6 81 35.8
CANSAT01G0793 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 56.2 98 32.7
CANSAT35G0312 Cannabis sativa HOM05D000003 ORTHO05D000167 3.1e-06 56.2 48 54.2
CANSAT56G0120 Cannabis sativa HOM05D000003 ORTHO05D000004 3.1e-06 56.2 109 33.0
CANSAT11G0043 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.8 111 28.8
CANSAT11G2026 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.8 111 29.7
CANSAT36G0004 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.8 111 31.5
CANSAT64G1282 Cannabis sativa HOM05D000003 ORTHO05D000004 4.0e-06 55.8 106 30.2
Lj7C747G6 Lonicera japonica HOM05D000003 ORTHO05D000004 4.0e-06 55.8 78 32.1
CANSAT07G0003 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.5 224 22.8
CANSAT21G2356 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.5 113 32.7
CANSAT25G0043 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.5 111 31.5
CANSAT54G1002 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.5 75 41.3
CANSAT56G0912 Cannabis sativa HOM05D000003 ORTHO05D000004 5.3e-06 55.5 112 30.4
Nn2g14311 Nelumbo nucifera HOM05D000003 ORTHO05D000004 5.3e-06 55.5 110 28.2
CANSAT01G0451 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-06 55.1 89 32.6
CANSAT78G1210 Cannabis sativa HOM05D000003 ORTHO05D000004 6.9e-06 55.1 98 31.6
Lj1A1011T54 Lonicera japonica HOM05D000003 ORTHO05D000167 6.9e-06 55.1 150 28.7
CANSAT21G0233 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-06 54.7 111 30.6
CANSAT80G0199 Cannabis sativa HOM05D000003 ORTHO05D000004 9.0e-06 54.7 109 30.3


User provided reference genes

Program Settings