Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4C109T16 Lonicera japonica HOM05D003898 ORTHO05D004642 2.3e-204 715.3 360 100.0
Dinv13069 Davidia involucrata HOM05D003898 ORTHO05D004642 6.1e-128 461.5 360 69.2
Nitab4.5_0000425g0260 Nicotiana tabacum HOM05D003898 ORTHO05D004642 3.7e-125 452.2 346 69.4
CSS0048138 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 3.1e-124 449.1 351 67.2
CSS0037064 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 9.1e-124 447.6 349 67.0
CiPaw.06G023700 Carya illinoinensis HOM05D003898 ORTHO05D004642 1.6e-123 446.8 350 66.9
Manes.02G157700 Manihot esculenta HOM05D003898 ORTHO05D004642 2.0e-123 446.4 338 67.8
PGSC0003DMG401016958 Solanum tuberosum HOM05D003898 ORTHO05D004642 2.7e-123 446.0 345 68.7
TAR625G0437 Trochodendron aralioides HOM05D003898 ORTHO05D004642 1.3e-122 443.7 351 66.4
Sopen12g029520 Solanum pennellii HOM05D003898 ORTHO05D004642 2.9e-122 442.6 345 68.1
Solyc12g056840.2 Solanum lycopersicum HOM05D003898 ORTHO05D004642 6.5e-122 441.4 345 68.4
Actinidia33168 Actinidia chinensis HOM05D003898 ORTHO05D004642 1.1e-121 440.7 353 67.1
CAN.G617.2 Capsicum annuum HOM05D003898 ORTHO05D004642 9.4e-121 437.6 354 64.1
Duzib093G1469 Durio zibethinus HOM05D003898 ORTHO05D004642 1.2e-120 437.2 335 68.7
ECA246G0783 Erigeron canadensis HOM05D003898 ORTHO05D004642 3.6e-120 435.6 347 65.7
HanXRQChr05g0162311 Helianthus annuus HOM05D003898 ORTHO05D004642 3.6e-120 435.6 350 66.9
SGA_v2.0_scaffold11G05890 Striga asiatica HOM05D003898 ORTHO05D004642 3.6e-120 435.6 348 66.4
vmacro04776 Vaccinium macrocarpon HOM05D003898 ORTHO05D004642 3.6e-120 435.6 354 65.3
Prupe.1G507900 Prunus persica HOM05D003898 ORTHO05D004642 4.7e-120 435.3 353 63.7
QL12p035494 Quercus lobata HOM05D003898 ORTHO05D004642 2.3e-119 433.0 349 65.3
MSTRG.24959 Avicennia marina HOM05D003898 ORTHO05D004642 4.0e-119 432.2 352 65.1
Rhsim07G0198900 Rhododendron simsii HOM05D003898 ORTHO05D004642 5.2e-119 431.8 357 65.0
DCAR_028260 Daucus carota HOM05D003898 ORTHO05D004642 6.8e-119 431.4 342 66.1
Solyc04g072480.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 2.0e-118 429.9 357 64.1
Sc16g0001430 Simmondsia chinensis HOM05D003898 ORTHO05D004642 2.6e-118 429.5 349 64.2
CAN.G47.19 Capsicum annuum HOM05D003898 ORTHO05D004642 3.4e-118 429.1 370 63.5
HanXRQChr01g0001161 Helianthus annuus HOM05D003898 ORTHO05D004642 3.4e-118 429.1 350 66.0
MD08G1174000 Malus domestica HOM05D003898 ORTHO05D004642 4.4e-118 428.7 343 65.0
Peaxi162Scf00160g01643 Petunia axillaris HOM05D003898 ORTHO05D004642 4.4e-118 428.7 351 65.5
RcHm_v2.0_Chr7g0240421 Rosa chinensis HOM05D003898 ORTHO05D004642 4.4e-118 428.7 344 65.1
Thecc.08G115200 Theobroma cacao HOM05D003898 ORTHO05D004642 4.4e-118 428.7 343 66.2
Gorai.002G220000 Gossypium raimondii HOM05D003898 ORTHO05D004642 7.5e-118 427.9 334 68.6
Ciclev10005436m.g Citrus clementina HOM05D003898 ORTHO05D004642 2.8e-117 426.0 347 65.7
Gohir.A01G187300 Gossypium hirsutum HOM05D003898 ORTHO05D004642 2.8e-117 426.0 334 67.7
Gohir.D01G182400 Gossypium hirsutum HOM05D003898 ORTHO05D004642 2.8e-117 426.0 334 68.0
Aqoxy2G00480 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 3.7e-117 425.6 351 62.4
COL.COLO4_16517 Corchorus olitorius HOM05D003898 ORTHO05D004642 3.7e-117 425.6 335 66.9
Nitab4.5_0006745g0040 Nicotiana tabacum HOM05D003898 ORTHO05D004642 6.3e-117 424.9 418 58.9
Potri.002G090500 Populus trichocarpa HOM05D003898 ORTHO05D004642 6.3e-117 424.9 346 65.3
TWI12G0005 Tripterygium wilfordii HOM05D003898 ORTHO05D004642 1.4e-116 423.7 348 64.1
Sopen04g028670 Solanum pennellii HOM05D003898 ORTHO05D004642 3.1e-116 422.5 349 63.9
RcHm_v2.0_Chr1g0340891 Rosa chinensis HOM05D003898 ORTHO05D004642 7.0e-116 421.4 347 64.0
GSVIVG01008958001 Vitis vinifera HOM05D003898 ORTHO05D004642 7.0e-116 421.4 350 64.0
PGR044G1262 Punica granatum HOM05D003898 ORTHO05D004642 2.0e-115 419.9 350 62.9
FvH4_5g38420 Fragaria vesca HOM05D003898 ORTHO05D004642 4.5e-115 418.7 344 63.7
AUR62019012 Chenopodium quinoa HOM05D003898 ORTHO05D004642 1.0e-114 417.5 350 63.7
Potri.005G170600 Populus trichocarpa HOM05D003898 ORTHO05D004642 1.0e-114 417.5 346 65.3
Cpa.g.sc49.114 Carica papaya HOM05D003898 ORTHO05D004642 1.3e-114 417.2 354 62.4
ClCG08G010840 Citrullus lanatus HOM05D003898 ORTHO05D004642 5.0e-114 415.2 355 62.0
AUR62027853 Chenopodium quinoa HOM05D003898 ORTHO05D004642 8.6e-114 414.5 349 63.3
CANSAT25G0948 Cannabis sativa HOM05D003898 ORTHO05D004642 1.9e-113 413.3 348 63.5
CiPaw.05G230800 Carya illinoinensis HOM05D003898 ORTHO05D004642 2.5e-113 412.9 350 63.1
EL10Ac6g15432 Beta vulgaris HOM05D003898 ORTHO05D004642 3.3e-113 412.5 349 61.9
Lsat_1_v5_gn_6_68860 Lactuca sativa HOM05D003898 ORTHO05D004642 4.2e-113 412.1 300 70.7
Migut.C00215 Erythranthe guttata HOM05D003898 ORTHO05D004642 9.5e-113 411.0 353 62.0
THA.LOC104813137 Tarenaya hassleriana HOM05D003898 ORTHO05D004642 3.6e-112 409.1 345 63.2
Sabra02G0071500 Salix brachista HOM05D003898 ORTHO05D004642 1.0e-111 407.5 361 61.5
FAN13G1941 Fragaria x ananassa HOM05D003898 ORTHO05D004642 6.8e-111 404.8 370 60.0
FvH4_7g08221 Fragaria vesca HOM05D003898 ORTHO05D004642 8.9e-111 404.4 334 63.8
PSO210G6710 Papaver somniferum HOM05D003898 ORTHO05D004642 8.9e-111 404.4 352 61.1
PSO447G0107 Papaver somniferum HOM05D003898 ORTHO05D004642 9.8e-110 401.0 352 60.8
Glyma.04G254600 Glycine max HOM05D003898 ORTHO05D004642 1.3e-109 400.6 352 61.1
Lsat_1_v5_gn_9_70200 Lactuca sativa HOM05D003898 ORTHO05D004642 3.7e-109 399.1 332 63.9
MELO3C011378.2 Cucumis melo HOM05D003898 ORTHO05D004642 4.9e-109 398.7 348 61.5
Glyma.06G107500 Glycine max HOM05D003898 ORTHO05D004642 6.3e-109 398.3 349 60.2
BraA10t45381Z Brassica rapa HOM05D003898 ORTHO05D004642 8.3e-109 397.9 335 62.4
Cc10_g06070 Coffea canephora HOM05D003898 ORTHO05D004642 8.3e-109 397.9 297 70.4
Ca_02530_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.8e-108 396.7 351 60.7
Lalb_Chr11g0065591 Lupinus albus HOM05D003898 ORTHO05D004642 5.4e-108 395.2 353 60.9
Phvul.009G026700 Phaseolus vulgaris HOM05D003898 ORTHO05D004642 7.0e-108 394.8 349 59.6
CDE10G0849 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 1.2e-107 394.0 349 61.3
VMungo1309G1855 Vigna mungo HOM05D003898 ORTHO05D004642 1.2e-107 394.0 349 59.9
CsaV3_6G035700 Cucumis sativus L. HOM05D003898 ORTHO05D004642 2.7e-107 392.9 348 61.2
Lalb_Chr08g0241771 Lupinus albus HOM05D003898 ORTHO05D004642 3.5e-107 392.5 351 60.4
Sed0026073 Sechium edule HOM05D003898 ORTHO05D004642 3.5e-107 392.5 338 60.9
Psat5g107440 Pisum sativum HOM05D003898 ORTHO05D004642 1.3e-106 390.6 351 59.5
Sp6g40350 Schrenkiella parvula HOM05D003898 ORTHO05D004642 1.3e-106 390.6 335 62.4
CANSAT01G0632 Cannabis sativa HOM05D003898 ORTHO05D004642 1.7e-106 390.2 340 62.4
BraA02t04709Z Brassica rapa HOM05D003898 ORTHO05D004642 2.9e-106 389.4 339 61.4
CARHR012640 Cardamine hirsuta HOM05D003898 ORTHO05D004642 2.9e-106 389.4 337 60.5
Haze_00543 Corylus avellana HOM05D003898 ORTHO05D004642 2.9e-106 389.4 376 58.0
Carub.0001s1201 Capsella rubella HOM05D003898 ORTHO05D004642 3.9e-106 389.0 335 60.0
TPR.G26798 Trifolium pratense HOM05D003898 ORTHO05D004642 1.1e-105 387.5 351 59.5
Thhalv10014147m.g Eutrema salsugineum HOM05D003898 ORTHO05D004642 1.9e-105 386.7 335 60.9
BcaNung04450 Brassica carinata HOM05D003898 ORTHO05D004642 3.3e-105 386.0 335 61.5
Lj1g0002951 Lotus japonicus HOM05D003898 ORTHO05D004642 3.3e-105 386.0 351 59.5
C09p74420 Brassica napus HOM05D003898 ORTHO05D004642 4.3e-105 385.6 335 61.5
FAN08G2468 Fragaria x ananassa HOM05D003898 ORTHO05D004642 5.6e-105 385.2 366 57.7
A10p33510 Brassica napus HOM05D003898 ORTHO05D004642 9.5e-105 384.4 335 60.6
Medtr4g112080 Medicago truncatula HOM05D003898 ORTHO05D004642 9.5e-105 384.4 346 59.2
BolC9t60175H Brassica oleracea HOM05D003898 ORTHO05D004642 3.6e-104 382.5 335 61.2
Oeu038191.1 Olea europaea HOM05D003898 ORTHO05D004642 8.0e-104 381.3 336 63.4
Nitab4.5_0001307g0170 Nicotiana tabacum HOM05D003898 ORTHO05D004642 1.0e-103 380.9 352 59.4
arahy.Tifrunner.gnm1.ann1.K1QIEY Arachis hypogaea HOM05D003898 ORTHO05D004642 1.4e-103 380.6 397 53.9
Cfa015947 Carpinus fangiana HOM05D003898 ORTHO05D004642 1.4e-103 380.6 294 67.3
AT1G12350 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 1.8e-103 380.2 335 60.3
Aa31LG9G14440 Aethionema arabicum HOM05D003898 ORTHO05D004642 3.1e-103 379.4 315 62.5
TPR.G32957 Trifolium pratense HOM05D003898 ORTHO05D004642 2.0e-102 376.7 351 58.4
TAR381G1034 Trochodendron aralioides HOM05D003898 ORTHO05D004642 2.0e-102 376.7 295 66.4
Medtr3g073550 Medicago truncatula HOM05D003898 ORTHO05D004642 3.4e-102 375.9 351 57.3
C02p00370 Brassica napus HOM05D003898 ORTHO05D004642 4.4e-102 375.6 334 60.2
AL1G23670 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 6.4e-101 371.7 335 58.8
BcaNung06026 Brassica carinata HOM05D003898 ORTHO05D004642 1.4e-100 370.5 334 59.9
arahy.Tifrunner.gnm1.ann1.PF76WK Arachis hypogaea HOM05D003898 ORTHO05D004642 1.2e-99 367.5 296 64.2
arahy.Tifrunner.gnm1.ann1.HG05DD Arachis hypogaea HOM05D003898 ORTHO05D004642 2.0e-99 366.7 296 63.9
FAN01G1002 Fragaria x ananassa HOM05D000001 ORTHO05D000003 4.6e-99 365.5 345 58.0
Os02g0575200 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.5e-97 360.5 329 58.1
CSS0031031 Camellia sinensis var. sinensis HOM05D003898 ORTHO05D004642 5.6e-97 358.6 351 56.7
RcHm_v2.0_Chr1g0340911 Rosa chinensis HOM05D003898 ORTHO05D004642 9.5e-97 357.8 286 65.4
Os08g0176100 Oryza sativa ssp. japonica HOM05D003898 ORTHO05D004642 1.6e-96 357.1 347 56.2
arahy.Tifrunner.gnm1.ann1.Z23D3B Arachis hypogaea HOM05D003898 ORTHO05D004642 2.1e-96 356.7 305 62.0
Solyc10g011840.3 Solanum lycopersicum HOM05D003898 ORTHO05D004642 1.4e-95 354.0 345 56.8
SalBow7G2097 Salvia bowleyana HOM05D003898 ORTHO05D004642 5.8e-94 348.6 358 55.3
Zm00001eb414730 Zea mays HOM05D003898 ORTHO05D004642 2.2e-93 346.7 329 56.5
HPP92_006004 Vanilla planifolia HOM05D003898 ORTHO05D004642 2.9e-93 346.3 352 54.0
Nn1g05207 Nelumbo nucifera HOM05D003898 ORTHO05D004642 2.7e-91 339.7 275 62.9
FvH4_5g38402 Fragaria vesca HOM05D003898 ORTHO05D004642 7.8e-91 338.2 272 62.9
SEGI_30417 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 1.3e-90 337.4 337 53.7
Pp3c11_3000 Physcomitrium patens HOM05D003898 ORTHO05D004642 6.6e-90 335.1 338 53.8
Zm00001eb182920 Zea mays HOM05D003898 ORTHO05D004642 6.6e-90 335.1 331 54.7
Mapoly0004s0284 Marchantia polymorpha HOM05D003898 ORTHO05D004642 5.2e-87 325.5 334 53.0
Duzib116G0208 Durio zibethinus HOM05D003898 ORTHO05D004642 9.2e-84 314.7 336 53.9
FAN06G3434 Fragaria x ananassa HOM05D000001 ORTHO05D000003 3.3e-81 306.2 344 51.2
ClCG08G002640 Citrullus lanatus HOM05D003898 ORTHO05D004642 1.7e-77 293.9 469 42.2
MD15G1360400 Malus domestica HOM05D003898 ORTHO05D004642 2.2e-77 293.5 254 61.4
SalBow1G7967 Salvia bowleyana HOM05D003898 ORTHO05D004642 3.0e-74 283.1 342 48.8
ATR0564G227 Amborella trichopoda HOM05D003898 ORTHO05D004642 1.6e-72 277.3 264 57.2
AL6G11300 Arabidopsis lyrata HOM05D003898 ORTHO05D004642 2.0e-70 270.4 224 62.9
PGSC0003DMG400027542 Solanum tuberosum HOM05D003898 ORTHO05D004642 4.9e-69 265.8 188 72.9
Atru.chr13.1300 Acer truncatum HOM05D003898 ORTHO05D004642 2.1e-64 250.4 178 73.0
SMO137G0130 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 2.4e-63 246.9 336 45.2
Dinv44720 Davidia involucrata HOM05D003898 ORTHO05D004642 2.0e-62 243.8 206 65.0
Cre01.g048050 Chlamydomonas reinhardtii HOM05D003898 ORTHO05D004642 9.3e-60 235.0 334 44.9
Nitab4.5_0000553g0060 Nicotiana tabacum HOM05D003898 ORTHO05D004642 9.3e-60 235.0 275 50.5
AT5G02080 Arabidopsis thaliana HOM05D003898 ORTHO05D004642 1.2e-59 234.6 191 64.4
DCAR_027594 Daucus carota HOM05D003898 ORTHO05D004642 4.6e-59 232.6 241 55.2
FAN04G1035 Fragaria x ananassa HOM05D003898 ORTHO05D004642 7.9e-59 231.9 211 60.2
Lj4C710T9 Lonicera japonica HOM05D003898 ORTHO05D004642 1.9e-57 227.3 144 79.9
Sopen10g005660 Solanum pennellii HOM05D003898 ORTHO05D004642 2.5e-57 226.9 248 50.8
PRCOL_00003493 Prasinoderma coloniale HOM05D003898 ORTHO05D004642 5.6e-57 225.7 350 40.0
CDE10G0276 Ceratophyllum demersum HOM05D003898 ORTHO05D004642 1.8e-55 220.7 179 62.0
BolC2t06037H Brassica oleracea HOM05D003898 ORTHO05D004642 9.0e-55 218.4 170 67.6
SMO137G0020 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 2.6e-54 216.9 298 45.3
Eucgr.F04382 Eucalyptus grandis HOM05D003898 ORTHO05D004642 1.0e-53 214.9 148 73.6
AagrBONN_evm.TU.Sc2ySwM_344.1574 Anthoceros agrestis HOM05D003898 ORTHO05D004642 1.7e-53 214.2 223 51.6
Psat4g046560 Pisum sativum HOM05D003898 ORTHO05D011365 1.1e-52 211.5 171 66.7
MCO09G707 Micromonas commoda HOM05D003898 ORTHO05D004642 2.5e-49 200.3 312 39.1
unitig_32.g11143 Utricularia gibba HOM05D003898 ORTHO05D004642 1.2e-46 191.4 132 73.5
Ca_25770_v3 Cicer arietinum L. HOM05D003898 ORTHO05D004642 1.0e-45 188.3 181 59.7
Atru.chr4.493 Acer truncatum HOM05D003898 ORTHO05D004642 8.7e-42 175.3 122 68.9
SMO137G0337 Selaginella moellendorffii HOM05D003898 ORTHO05D004642 1.1e-41 174.9 256 42.2
FAN18G1940 Fragaria x ananassa HOM05D003898 ORTHO05D004642 1.5e-41 174.5 195 52.3
Atru.chr13.1301 Acer truncatum HOM05D003898 ORTHO05D004642 2.5e-41 173.7 164 56.1
Atru.chr1.2069 Acer truncatum HOM05D003898 ORTHO05D004642 1.3e-40 171.4 118 70.3
Cfa024377 Carpinus fangiana HOM05D003898 ORTHO05D004642 2.8e-40 170.2 303 39.6
SEGI_10597 Sequoiadendron giganteum HOM05D003898 ORTHO05D004642 3.4e-38 163.3 153 58.2
CBR_g9000 Chara braunii HOM05D003898 ORTHO05D004642 3.4e-30 136.7 207 38.6
Duzib041G0680 Durio zibethinus HOM05D003898 ORTHO05D004642 3.8e-29 133.3 106 67.0
arahy.Tifrunner.gnm1.ann1.Z5SK82 Arachis hypogaea HOM05D003898 ORTHO05D004642 3.2e-28 130.2 204 40.2
CBR_g9001 Chara braunii HOM05D003898 ORTHO05D004642 2.3e-26 124.0 112 59.8
Aqoxy480s002 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 4.8e-24 116.3 125 48.0
arahy.Tifrunner.gnm1.ann1.N7W281 Arachis hypogaea HOM05D003898 ORTHO05D004642 1.1e-23 115.2 164 41.5
unitig_32.g11144 Utricularia gibba HOM05D003898 ORTHO05D004642 3.5e-22 110.2 143 48.3
arahy.Tifrunner.gnm1.ann1.9J7JQ6 Arachis hypogaea HOM05D003898 ORTHO05D004642 8.0e-19 99.0 61 73.8
QL10p044069 Quercus lobata HOM05D003898 ORTHO05D004642 1.6e-14 84.7 76 59.2
Ah.05g170600 Amaranthus hybridus HOM05D003898 ORTHO05D004642 1.9e-12 77.8 88 50.0
QL02p062685 Quercus lobata HOM05D003898 ORTHO05D004642 5.5e-12 76.3 76 56.6
arahy.Tifrunner.gnm1.ann1.KW4E90 Arachis hypogaea HOM05D003898 ORTHO05D004642 7.2e-12 75.9 91 45.1
Aqoxy5G01116 Aquilegia oxysepala HOM05D003898 ORTHO05D004642 2.1e-11 74.3 44 81.8
Peaxi162Scf00756g00110 Petunia axillaris HOM05D003898 ORTHO05D004642 4.7e-11 73.2 83 44.6
QL10p009819 Quercus lobata HOM05D003898 ORTHO05D004642 1.7e-08 64.7 62 54.8
QL08p011560 Quercus lobata HOM05D003898 ORTHO05D004642 1.2e-06 58.5 62 53.2
Atru.chr5.2810 Acer truncatum HOM05D003898 ORTHO05D004642 7.7e-06 55.8 54 57.4


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