Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 2.2e-62 242.3 135 100.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 4.6e-28 128.3 121 63.6
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 3.9e-19 98.6 106 61.3
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.3e-17 93.6 97 59.8
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.2e-17 91.3 119 49.6
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.8e-16 89.7 119 48.7
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 1.8e-16 89.7 99 53.5
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.4e-16 89.4 98 59.2
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 2.4e-16 89.4 103 56.3
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 1.2e-15 87.0 121 37.2
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 2.6e-15 85.9 103 52.4
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 4.5e-15 85.1 121 38.8
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 5.8e-15 84.7 99 57.6
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 5.8e-15 84.7 98 56.1
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.7e-14 83.2 100 56.0
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 3.8e-14 82.0 126 46.8
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 8.4e-14 80.9 102 52.9
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.1e-13 80.5 113 48.7
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 1.1e-13 80.5 114 50.0
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 1.4e-13 80.1 113 46.9
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.2e-13 79.0 119 47.1
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.2e-13 78.6 119 49.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 4.2e-13 78.6 114 51.8
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 4.2e-13 78.6 94 57.4
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 5.5e-13 78.2 98 56.1
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-12 77.0 118 48.3
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 1.2e-12 77.0 98 54.1
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 1.2e-12 77.0 98 57.1
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.5e-12 75.5 94 52.1
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 3.5e-12 75.5 99 51.5
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 4.6e-12 75.1 100 51.0
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 4.6e-12 75.1 98 39.8
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 1.0e-11 73.9 96 53.1
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 1.3e-11 73.6 97 38.1
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.8e-11 73.2 97 49.5
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 3.0e-11 72.4 97 55.7
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.0e-11 72.4 99 49.5
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.9e-11 72.0 97 47.4
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 5.1e-11 71.6 122 41.8
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 1.1e-10 70.5 119 44.5
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.5e-10 70.1 103 35.0
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.5e-10 70.1 103 35.0
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 1.5e-10 70.1 98 53.1
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-10 69.7 98 49.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-10 69.7 98 49.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.9e-10 69.7 98 49.0
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 1.9e-10 69.7 98 46.9
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.5e-10 69.3 98 44.9
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 2.5e-10 69.3 92 53.3
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 4.3e-10 68.6 97 45.4
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 4.3e-10 68.6 103 46.6
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 7.4e-10 67.8 96 36.5
Ca_18369_v3 Cicer arietinum L. HOM05D007310 ORTHO05D002375 9.6e-10 67.4 121 46.3
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 9.6e-10 67.4 99 45.5
PSO761G0222 Papaver somniferum HOM05D007310 ORTHO05D002375 9.6e-10 67.4 98 36.7
TPR.G2868 Trifolium pratense HOM05D007310 ORTHO05D002375 9.6e-10 67.4 121 46.3
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.3e-09 67.0 98 48.0
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.3e-09 67.0 98 48.0
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 1.6e-09 66.6 109 32.1
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.6e-09 66.6 117 41.9
Cfa005685 Carpinus fangiana HOM05D007310 ORTHO05D002375 2.1e-09 66.2 102 44.1
AUR62011722 Chenopodium quinoa HOM05D007310 ORTHO05D002375 2.1e-09 66.2 99 46.5
AUR62012905 Chenopodium quinoa HOM05D007310 ORTHO05D002375 3.7e-09 65.5 99 46.5
Glyma.13G042400 Glycine max HOM05D007310 ORTHO05D002375 3.7e-09 65.5 117 45.3
Potri.001G310100 Populus trichocarpa HOM05D007310 ORTHO05D002375 3.7e-09 65.5 104 47.1
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 3.7e-09 65.5 74 55.4
Medtr4g093820 Medicago truncatula HOM05D007310 ORTHO05D002375 4.8e-09 65.1 113 44.2
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 4.8e-09 65.1 98 46.9
Ciclev10030152m.g Citrus clementina HOM05D007310 ORTHO05D002375 6.2e-09 64.7 98 50.0
Dinv24166 Davidia involucrata HOM05D007310 ORTHO05D002375 6.2e-09 64.7 98 44.9
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 8.2e-09 64.3 98 49.0
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 8.2e-09 64.3 121 39.7
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 8.2e-09 64.3 99 44.4
Migut.B00577 Erythranthe guttata HOM05D007310 ORTHO05D002375 1.1e-08 63.9 97 33.0
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.1e-08 63.9 102 47.1
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 1.4e-08 63.5 121 38.8
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 1.8e-08 63.2 97 43.3
Haze_10565 Corylus avellana HOM05D007310 ORTHO05D002375 1.8e-08 63.2 102 44.1
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 2.4e-08 62.8 94 47.9
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 2.4e-08 62.8 98 50.0
Hma1.2p1_0784F.1_g217300 Hydrangea macrophylla HOM05D007310 ORTHO05D002375 2.4e-08 62.8 95 47.4
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.4e-08 62.8 94 46.8
VMungo0251G1327 Vigna mungo HOM05D007310 ORTHO05D002375 2.4e-08 62.8 97 50.5
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 3.1e-08 62.4 90 48.9
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 3.1e-08 62.4 98 31.6
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 3.1e-08 62.4 99 49.5
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 4.0e-08 62.0 67 61.2
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.0e-08 62.0 98 49.0
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 4.0e-08 62.0 98 49.0
FvH4_2g13500 Fragaria vesca HOM05D007310 ORTHO05D002375 5.3e-08 61.6 102 31.4
FAN24G3359 Fragaria x ananassa HOM05D007310 ORTHO05D004145 5.3e-08 61.6 102 31.4
CiPaw.05G032100 Carya illinoinensis HOM05D007310 ORTHO05D002375 6.9e-08 61.2 98 46.9
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 6.9e-08 61.2 96 32.3
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 6.9e-08 61.2 79 58.2
Eucgr.I02631 Eucalyptus grandis HOM05D007310 ORTHO05D002375 6.9e-08 61.2 103 40.8
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 6.9e-08 61.2 98 51.0
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 6.9e-08 61.2 106 48.1
Lj4A728G41 Lonicera japonica HOM05D004728 ORTHO05D002375 6.9e-08 61.2 52 55.8
Peaxi162Scf00299g00914 Petunia axillaris HOM05D007310 ORTHO05D002375 6.9e-08 61.2 98 34.7
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 9.0e-08 60.8 95 34.7
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 9.0e-08 60.8 94 47.9
Aqoxy476s001 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-07 60.5 108 45.4
Aqoxy6G00704 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.2e-07 60.5 108 45.4
Psat7g100440 Pisum sativum HOM05D007310 ORTHO05D002375 1.2e-07 60.5 108 44.4
arahy.Tifrunner.gnm1.ann1.KVX74B Arachis hypogaea HOM05D007310 ORTHO05D002375 1.5e-07 60.1 112 42.9
arahy.Tifrunner.gnm1.ann1.U7VQVC Arachis hypogaea HOM05D007310 ORTHO05D002375 1.5e-07 60.1 112 42.9
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.5e-07 60.1 98 33.7
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.5e-07 60.1 95 47.4
DCAR_021882 Daucus carota HOM05D007310 ORTHO05D002375 2.0e-07 59.7 104 41.3
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.0e-07 59.7 98 45.9
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 2.0e-07 59.7 94 46.8
Potri.017G050000 Populus trichocarpa HOM05D007310 ORTHO05D002375 2.6e-07 59.3 103 44.7
Prupe.8G066300 Prunus persica HOM05D007310 ORTHO05D002375 2.6e-07 59.3 97 43.3
PGR142G1548 Punica granatum HOM05D007310 ORTHO05D002375 2.6e-07 59.3 101 45.5
Rhsim05G0103200 Rhododendron simsii HOM05D007310 ORTHO05D002375 2.6e-07 59.3 98 43.9
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.4e-07 58.9 121 26.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 3.4e-07 58.9 100 46.0
EL10Ac9g21224 Beta vulgaris HOM05D007310 ORTHO05D002375 4.5e-07 58.5 97 43.3
DCAR_020003 Daucus carota HOM05D004728 ORTHO05D002375 4.5e-07 58.5 85 51.8
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 4.5e-07 58.5 94 39.4
Lsat_1_v5_gn_9_73660 Lactuca sativa HOM05D004728 ORTHO05D045252 5.8e-07 58.2 93 43.0
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 5.8e-07 58.2 98 44.9
TAR625G1009 Trochodendron aralioides HOM05D007310 ORTHO05D002375 5.8e-07 58.2 98 35.7
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 7.6e-07 57.8 98 42.9
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 7.6e-07 57.8 98 42.9
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 7.6e-07 57.8 94 48.9
Zm00001eb027840 Zea mays HOM05D007310 ORTHO05D002375 7.6e-07 57.8 96 39.6
MD05G1054900 Malus domestica HOM05D007310 ORTHO05D002375 1.0e-06 57.4 94 45.7
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 1.0e-06 57.4 106 43.4
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 1.3e-06 57.0 103 30.1
SalBow8G1210 Salvia bowleyana HOM05D007310 ORTHO05D002375 1.3e-06 57.0 101 29.7
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 1.7e-06 56.6 131 38.2
FAN27G1440 Fragaria x ananassa HOM05D007310 ORTHO05D002375 1.7e-06 56.6 102 33.3
RcHm_v2.0_Chr7g0236611 Rosa chinensis HOM05D007310 ORTHO05D002375 1.7e-06 56.6 103 40.8
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.2e-06 56.2 104 46.2
HPP92_019302 Vanilla planifolia HOM05D007310 ORTHO05D002375 2.2e-06 56.2 103 39.8
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.8e-06 55.5 103 28.2
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.8e-06 55.5 86 51.2
Oeu002157.4 Olea europaea HOM05D004728 ORTHO05D002375 3.8e-06 55.5 94 44.7
PGSC0003DMG400012536 Solanum tuberosum HOM05D007310 ORTHO05D002375 3.8e-06 55.5 97 33.0
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 3.8e-06 55.5 94 28.7
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.9e-06 55.1 98 38.8
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 4.9e-06 55.1 86 51.2
Nitab4.5_0006625g0010 Nicotiana tabacum HOM05D007310 ORTHO05D002375 4.9e-06 55.1 100 33.0
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 4.9e-06 55.1 98 45.9
CSS0047922 Camellia sinensis var. sinensis HOM05D007310 ORTHO05D002375 6.5e-06 54.7 101 44.6
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 6.5e-06 54.7 83 50.6
Manes.07G038100 Manihot esculenta HOM05D007310 ORTHO05D002375 6.5e-06 54.7 98 41.8
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 6.5e-06 54.7 94 47.9
Cc02_g21140 Coffea canephora HOM05D007310 ORTHO05D002375 8.4e-06 54.3 98 41.8


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