Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A924T28 Lonicera japonica HOM05D005887 ORTHO05D007694 2.8e-48 194.9 96 100.0
ClCG04G004540 Citrullus lanatus HOM05D005887 ORTHO05D007694 3.7e-40 167.9 93 87.1
Dinv25053 Davidia involucrata HOM05D005887 ORTHO05D007694 3.7e-40 167.9 93 87.1
Lsat_1_v5_gn_6_31540 Lactuca sativa HOM05D005887 ORTHO05D007694 3.7e-40 167.9 96 86.5
GSVIVG01029948001 Vitis vinifera HOM05D005887 ORTHO05D007694 3.7e-40 167.9 93 87.1
Actinidia03929 Actinidia chinensis HOM05D005887 ORTHO05D007694 4.9e-40 167.5 93 84.9
CSS0043599 Camellia sinensis var. sinensis HOM05D005887 ORTHO05D007694 4.9e-40 167.5 93 87.1
Dinv05561 Davidia involucrata HOM05D005887 ORTHO05D007694 4.9e-40 167.5 93 86.0
MELO3C008847.2 Cucumis melo HOM05D005887 ORTHO05D007694 1.4e-39 166.0 93 86.0
Cc06_g17170 Coffea canephora HOM05D005887 ORTHO05D007694 1.8e-39 165.6 93 84.9
MD12G1009600 Malus domestica HOM05D005887 ORTHO05D007694 1.8e-39 165.6 93 84.9
Ciclev10019476m.g Citrus clementina HOM05D005887 ORTHO05D007694 3.2e-39 164.9 93 82.8
CsaV3_4G012000 Cucumis sativus L. HOM05D005887 ORTHO05D007694 3.2e-39 164.9 93 84.9
ECA233G0274 Erigeron canadensis HOM05D005887 ORTHO05D007694 3.2e-39 164.9 93 86.0
Manes.09G137200 Manihot esculenta HOM05D005887 ORTHO05D007694 4.1e-39 164.5 93 87.1
TAR623G1725 Trochodendron aralioides HOM05D005887 ORTHO05D007694 4.1e-39 164.5 93 83.9
CiPaw.09G168200 Carya illinoinensis HOM05D005887 ORTHO05D007694 5.4e-39 164.1 93 83.9
Glyma.16G037100 Glycine max HOM05D005887 ORTHO05D007694 5.4e-39 164.1 93 86.0
Glyma.19G116000 Glycine max HOM05D005887 ORTHO05D007694 5.4e-39 164.1 93 86.0
Lj1g0025826 Lotus japonicus HOM05D005887 ORTHO05D007694 5.4e-39 164.1 93 84.9
MBI11_g23645_MAGBIO Magnolia biondii HOM05D005887 ORTHO05D007694 5.4e-39 164.1 93 84.9
EL10Ac5g11724 Beta vulgaris HOM05D005887 ORTHO05D007694 7.0e-39 163.7 93 84.9
MD14G1007000 Malus domestica HOM05D005887 ORTHO05D007694 7.0e-39 163.7 93 82.8
PGR142G3047 Punica granatum HOM05D005887 ORTHO05D007694 9.2e-39 163.3 93 83.9
CANSAT78G0414 Cannabis sativa HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 84.9
Cfa017707 Carpinus fangiana HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 82.8
AUR62036255 Chenopodium quinoa HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 84.9
PSO339G4097 Papaver somniferum HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 81.7
Solyc10g081470.2 Solanum lycopersicum HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 83.9
PGSC0003DMG400028216 Solanum tuberosum HOM05D005887 ORTHO05D007694 1.2e-38 162.9 93 83.9
CAN.G128.144 Capsicum annuum HOM05D005887 ORTHO05D007694 1.6e-38 162.5 93 83.9
Haze_20429 Corylus avellana HOM05D005887 ORTHO05D007694 1.6e-38 162.5 93 82.8
Peaxi162Scf00575g00211 Petunia axillaris HOM05D005887 ORTHO05D007694 1.6e-38 162.5 93 83.9
TWI32G0189 Tripterygium wilfordii HOM05D005887 ORTHO05D007694 1.6e-38 162.5 93 82.8
Gohir.A11G230900 Gossypium hirsutum HOM05D005887 ORTHO05D007694 2.0e-38 162.2 93 81.7
Gorai.007G256500 Gossypium raimondii HOM05D005887 ORTHO05D007694 2.0e-38 162.2 93 81.7
Phvul.001G115400 Phaseolus vulgaris HOM05D005887 ORTHO05D007694 2.0e-38 162.2 93 84.9
Sopen10g031970 Solanum pennellii HOM05D005887 ORTHO05D007694 2.0e-38 162.2 93 82.8
VMungo1383G0364 Vigna mungo HOM05D005887 ORTHO05D007694 2.0e-38 162.2 93 84.9
AUR62038443 Chenopodium quinoa HOM05D005887 ORTHO05D007694 2.7e-38 161.8 93 83.9
HanXRQChr13g0398941 Helianthus annuus HOM05D005887 ORTHO05D007694 2.7e-38 161.8 93 84.9
CDE02G2374 Ceratophyllum demersum HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 81.7
FvH4_1g28520 Fragaria vesca HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 82.8
FAN23G2292 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 82.8
FAN26G0029 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 82.8
FAN28G1866 Fragaria x ananassa HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 82.8
Thecc.05G243300 Theobroma cacao HOM05D005887 ORTHO05D007694 3.5e-38 161.4 93 81.7
Atru.chr2.1494 Acer truncatum HOM05D005887 ORTHO05D007694 4.5e-38 161.0 93 83.9
Lalb_Chr14g0364771 Lupinus albus HOM05D005887 ORTHO05D007694 4.5e-38 161.0 93 80.6
Potri.013G064700 Populus trichocarpa HOM05D005887 ORTHO05D007694 4.5e-38 161.0 93 82.8
Sabra13G0056600 Salix brachista HOM05D005887 ORTHO05D007694 4.5e-38 161.0 93 82.8
Gohir.D11G242200 Gossypium hirsutum HOM05D005887 ORTHO05D007694 5.9e-38 160.6 93 80.6
RcHm_v2.0_Chr3g0496231 Rosa chinensis HOM05D005887 ORTHO05D007694 7.8e-38 160.2 93 83.9
Nitab4.5_0000613g0020 Nicotiana tabacum HOM05D005887 ORTHO05D007694 1.0e-37 159.8 93 81.7
CDE05G2124 Ceratophyllum demersum HOM05D005887 ORTHO05D007694 1.7e-37 159.1 93 80.6
Os03g0792400 Oryza sativa ssp. japonica HOM05D005887 ORTHO05D007694 2.3e-37 158.7 93 78.5
Sed0023418 Sechium edule HOM05D005887 ORTHO05D007694 2.3e-37 158.7 93 80.6
Zm00001eb060350 Zea mays HOM05D005887 ORTHO05D007694 2.3e-37 158.7 93 79.6
ATR0697G253 Amborella trichopoda HOM05D005887 ORTHO05D007694 2.9e-37 158.3 93 78.5
PSO384G1854 Papaver somniferum HOM05D005887 ORTHO05D007694 2.9e-37 158.3 93 79.6
Zm00001eb213150 Zea mays HOM05D005887 ORTHO05D007694 2.9e-37 158.3 93 78.5
Sc07g0007810 Simmondsia chinensis HOM05D005887 ORTHO05D007694 3.9e-37 157.9 93 80.6
Ca_08305_v3 Cicer arietinum L. HOM05D005887 ORTHO05D007694 5.0e-37 157.5 93 80.6
Nn2g14541 Nelumbo nucifera HOM05D005887 ORTHO05D007694 6.6e-37 157.1 93 80.6
Eucgr.K01523 Eucalyptus grandis HOM05D005887 ORTHO05D007694 1.5e-36 156.0 93 80.6
Oeu052792.1 Olea europaea HOM05D005887 ORTHO05D007694 1.5e-36 156.0 93 79.6
vmacro07662 Vaccinium macrocarpon HOM05D005887 ORTHO05D007694 1.9e-36 155.6 93 78.5
arahy.Tifrunner.gnm1.ann1.4AIN5Y Arachis hypogaea HOM05D005887 ORTHO05D007694 2.5e-36 155.2 93 78.5
arahy.Tifrunner.gnm1.ann1.AI33FF Arachis hypogaea HOM05D005887 ORTHO05D007694 2.5e-36 155.2 93 78.5
Aqoxy2G00576 Aquilegia oxysepala HOM05D005887 ORTHO05D007694 3.3e-36 154.8 93 81.7
Carub.0007s3113 Capsella rubella HOM05D005887 ORTHO05D007694 4.3e-36 154.5 93 78.5
AT5G35220 Arabidopsis thaliana HOM05D005887 ORTHO05D007694 5.6e-36 154.1 93 78.5
SalBow6G3467 Salvia bowleyana HOM05D005887 ORTHO05D007694 5.6e-36 154.1 93 80.6
SalBow6G6179 Salvia bowleyana HOM05D005887 ORTHO05D007694 5.6e-36 154.1 93 80.6
MSTRG.19728 Avicennia marina HOM05D005887 ORTHO05D007694 9.5e-36 153.3 93 79.6
CARHR217310 Cardamine hirsuta HOM05D005887 ORTHO05D007694 9.5e-36 153.3 93 78.5
Thhalv10003446m.g Eutrema salsugineum HOM05D005887 ORTHO05D007694 9.5e-36 153.3 93 79.6
Sp7g07090 Schrenkiella parvula HOM05D005887 ORTHO05D007694 9.5e-36 153.3 93 79.6
AL7G44120 Arabidopsis lyrata HOM05D005887 ORTHO05D007694 2.1e-35 152.1 93 77.4
Prupe.7G011600 Prunus persica HOM05D005887 ORTHO05D007694 4.7e-35 151.0 84 83.3
Aa31LG9G14060 Aethionema arabicum HOM05D005887 ORTHO05D007694 6.1e-35 150.6 93 78.5
Lj1g0022988 Lotus japonicus HOM05D005887 ORTHO05D007694 8.0e-35 150.2 93 79.6
BcaB02g08052 Brassica carinata HOM05D005887 ORTHO05D007694 1.0e-34 149.8 93 77.4
A05p16500 Brassica napus HOM05D005887 ORTHO05D007694 1.0e-34 149.8 93 77.4
BraA05t20555Z Brassica rapa HOM05D005887 ORTHO05D007694 1.0e-34 149.8 93 77.4
DCAR_013485 Daucus carota HOM05D005887 ORTHO05D007694 1.0e-34 149.8 90 78.9
unitig_60.g25490 Utricularia gibba HOM05D005887 ORTHO05D007694 1.8e-34 149.1 90 78.9
BcaC08g44312 Brassica carinata HOM05D005887 ORTHO05D007694 4.0e-34 147.9 93 76.3
C06p17350 Brassica napus HOM05D005887 ORTHO05D007694 4.0e-34 147.9 93 76.3
BolC6t36931H Brassica oleracea HOM05D005887 ORTHO05D007694 4.0e-34 147.9 93 76.3
FAN19G2652 Fragaria x ananassa HOM05D005887 ORTHO05D007694 6.8e-34 147.1 84 82.1
Medtr7g086430 Medicago truncatula HOM05D005887 ORTHO05D007694 8.9e-34 146.7 93 77.4
Nitab4.5_0000387g0010 Nicotiana tabacum HOM05D005887 ORTHO05D007694 2.0e-33 145.6 84 81.0
Migut.J01533 Erythranthe guttata HOM05D005887 ORTHO05D007694 5.8e-33 144.1 93 74.2
SGA_v2.0_scaffold66G22381 Striga asiatica HOM05D005887 ORTHO05D007694 4.9e-32 141.0 101 72.3
HPP92_012147 Vanilla planifolia HOM05D005887 ORTHO05D007694 8.3e-32 140.2 93 75.3
TPR.G17873 Trifolium pratense HOM05D005887 ORTHO05D007694 3.2e-31 138.3 93 72.0
Psat3g087360 Pisum sativum HOM05D005887 ORTHO05D007694 1.9e-28 129.0 92 70.7
Mapoly0088s0062 Marchantia polymorpha HOM05D005887 ORTHO05D007694 4.3e-28 127.9 90 68.9
Duzib177G0756 Durio zibethinus HOM05D005887 ORTHO05D007694 3.6e-27 124.8 92 67.4
Cpa.g.sc161.26 Carica papaya HOM05D005887 ORTHO05D007694 2.3e-26 122.1 70 82.9
Ah.12g059820 Amaranthus hybridus HOM05D005887 ORTHO05D007694 8.9e-26 120.2 69 82.6
Hund15123 Selenicereus undatus HOM05D005887 ORTHO05D007694 2.4e-23 112.1 93 65.6
Pp3c21_2290 Physcomitrium patens HOM05D005887 ORTHO05D007694 1.8e-18 95.9 83 55.4
Pp3c18_19520 Physcomitrium patens HOM05D005887 ORTHO05D007694 4.0e-18 94.7 87 55.2
CBR_g29290 Chara braunii HOM05D005887 ORTHO05D007694 1.2e-17 93.2 86 55.8
Cre03.g206929 Chlamydomonas reinhardtii HOM05D005887 ORTHO05D007694 1.5e-12 76.3 95 42.1
MCO02G246 Micromonas commoda HOM05D005887 ORTHO05D007694 1.2e-09 66.6 73 50.7
PRCOL_00004624 Prasinoderma coloniale HOM05D005887 ORTHO05D007694 9.9e-09 63.5 92 39.1
AagrBONN_evm.TU.Sc2ySwM_228.5240 Anthoceros agrestis HOM05D005887 ORTHO05D007694 8.4e-08 60.5 39 76.9


User provided reference genes

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