Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A910T18 Lonicera japonica HOM05D000880 ORTHO05D009684 1.1e-181 641.0 721 100.0
Lj6C69T3 Lonicera japonica HOM05D000880 ORTHO05D009684 8.8e-110 402.1 304 94.4
Dinv15656 Davidia involucrata HOM05D000880 ORTHO05D009684 1.8e-70 271.6 317 71.3
Actinidia06447 Actinidia chinensis HOM05D000880 ORTHO05D009684 5.2e-62 243.4 320 66.9
vmacro08195 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 1.3e-52 212.2 322 64.9
Rhsim04G0217100 Rhododendron simsii HOM05D000880 ORTHO05D009684 4.2e-51 207.2 321 62.6
TAR626G1204 Trochodendron aralioides HOM05D000880 ORTHO05D009684 4.9e-44 183.7 319 61.4
Cc08_g06370 Coffea canephora HOM05D000880 ORTHO05D009684 6.4e-44 183.3 315 62.5
CSS0007644 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 3.2e-43 181.0 293 62.8
Cfa013251 Carpinus fangiana HOM05D000880 ORTHO05D008158 7.1e-43 179.9 310 60.0
Atru.chr7.2671 Acer truncatum HOM05D000880 ORTHO05D009684 1.2e-42 179.1 304 57.6
QL12p024656 Quercus lobata HOM05D000880 ORTHO05D009684 2.3e-41 174.9 307 59.0
CiPaw.07G214800 Carya illinoinensis HOM05D000880 ORTHO05D009684 3.0e-41 174.5 312 59.3
Nitab4.5_0000502g0180 Nicotiana tabacum HOM05D000880 ORTHO05D009684 7.4e-40 169.9 312 58.3
Migut.E01433 Erythranthe guttata HOM05D000880 ORTHO05D009684 1.8e-38 165.2 311 59.5
Manes.07G088100 Manihot esculenta HOM05D000880 ORTHO05D009684 1.8e-38 165.2 314 55.4
Oeu040613.1 Olea europaea HOM05D000880 ORTHO05D009684 2.4e-38 164.9 174 52.9
Prupe.1G462500 Prunus persica HOM05D000880 ORTHO05D009684 4.5e-37 160.6 319 56.4
Cpa.g.sc10.206 Carica papaya HOM05D000880 ORTHO05D009684 5.8e-37 160.2 302 59.3
MD08G1133900 Malus domestica HOM05D000880 ORTHO05D009684 7.6e-37 159.8 315 57.1
Nn8g39798 Nelumbo nucifera HOM05D000880 ORTHO05D009684 7.6e-37 159.8 312 60.6
Lsat_1_v5_gn_5_33201 Lactuca sativa HOM05D000880 ORTHO05D009684 1.7e-36 158.7 174 48.3
PGSC0003DMG400005692 Solanum tuberosum HOM05D000880 ORTHO05D009684 6.4e-36 156.8 312 59.3
Solyc03g120070.4 Solanum lycopersicum HOM05D000880 ORTHO05D009684 8.4e-36 156.4 312 57.7
Haze_21694 Corylus avellana HOM05D000880 ORTHO05D009684 1.9e-35 155.2 261 63.2
Lalb_Chr03g0032741 Lupinus albus HOM05D000880 ORTHO05D009684 4.2e-35 154.1 321 54.5
Sopen03g038940 Solanum pennellii HOM05D000880 ORTHO05D009684 5.5e-35 153.7 312 59.0
CANSAT78G1387 Cannabis sativa HOM05D000880 ORTHO05D009684 2.1e-34 151.8 308 56.2
FAN24G3119 Fragaria x ananassa HOM05D000880 ORTHO05D009684 2.7e-34 151.4 296 58.4
vmacro08192 Vaccinium macrocarpon HOM05D000880 ORTHO05D009684 3.0e-33 147.9 305 54.8
HanXRQChr07g0202221 Helianthus annuus HOM05D000880 ORTHO05D009684 4.3e-32 144.1 185 47.6
SGA_v2.0_scaffold121G33022 Striga asiatica HOM05D000880 ORTHO05D009684 7.4e-32 143.3 312 47.4
SalBow8G2909 Salvia bowleyana HOM05D004918 ORTHO05D005706 1.3e-31 142.5 310 55.2
Potri.018G004400 Populus trichocarpa HOM05D000880 ORTHO05D009684 2.8e-31 141.4 305 55.4
FAN20G2124 Fragaria x ananassa HOM05D000880 ORTHO05D009684 8.2e-31 139.8 307 56.7
Ciclev10007859m.g Citrus clementina HOM05D000880 ORTHO05D009684 1.4e-30 139.0 303 56.4
RcHm_v2.0_Chr6g0312241 Rosa chinensis HOM05D000880 ORTHO05D009684 1.4e-30 139.0 312 55.8
Peaxi162Scf00288g01016 Petunia axillaris HOM05D000880 ORTHO05D009684 2.4e-30 138.3 313 55.6
FvH4_2g30660 Fragaria vesca HOM05D000880 ORTHO05D009684 2.2e-28 131.7 247 63.6
Sabra18G0010100 Salix brachista HOM05D000880 ORTHO05D009684 2.2e-28 131.7 302 55.3
Thecc.09G004700 Theobroma cacao HOM05D000880 ORTHO05D009684 2.2e-28 131.7 168 46.4
GSVIVG01003996001 Vitis vinifera HOM05D000880 ORTHO05D009684 2.2e-28 131.7 206 73.8
Sabra18G0001200 Salix brachista HOM05D000880 ORTHO05D009684 2.9e-28 131.3 301 55.5
Aqoxy5G01876 Aquilegia oxysepala HOM05D000880 ORTHO05D009684 1.1e-27 129.4 308 55.2
arahy.Tifrunner.gnm1.ann1.D3X7TW Arachis hypogaea HOM05D005666 ORTHO05D007183 1.4e-27 129.0 310 54.2
FAN27G3148 Fragaria x ananassa HOM05D000880 ORTHO05D009684 1.4e-27 129.0 247 63.2
Hund04480 Selenicereus undatus HOM05D000880 ORTHO05D009684 4.2e-27 127.5 234 67.5
arahy.Tifrunner.gnm1.ann1.CHY0RW Arachis hypogaea HOM05D000880 ORTHO05D009684 7.1e-27 126.7 310 54.2
Phvul.011G207000 Phaseolus vulgaris HOM05D000880 ORTHO05D009684 7.9e-26 123.2 233 64.4
Nitab4.5_0001956g0020 Nicotiana tabacum HOM05D000880 ORTHO05D009684 1.3e-25 122.5 309 54.7
CsaV3_2G031530 Cucumis sativus L. HOM05D000880 ORTHO05D009684 6.7e-25 120.2 256 60.5
PGR044G0315 Punica granatum HOM05D000880 ORTHO05D009684 1.1e-24 119.4 293 53.9
Ca_12883_v3 Cicer arietinum L. HOM05D000880 ORTHO05D009684 1.5e-24 119.0 223 61.9
MSTRG.13951 Avicennia marina HOM05D000880 ORTHO05D009684 1.9e-24 118.6 207 71.5
ClCG08G012780 Citrullus lanatus HOM05D006422 ORTHO05D007992 3.3e-24 117.9 288 56.6
Glyma.13G197400 Glycine max HOM05D000880 ORTHO05D009684 3.3e-24 117.9 232 55.2
MELO3C011202.2 Cucumis melo HOM05D000880 ORTHO05D009684 1.6e-23 115.5 288 56.6
Medtr1g010020 Medicago truncatula HOM05D000880 ORTHO05D009684 1.6e-23 115.5 297 54.9
VMungo1127G1257 Vigna mungo HOM05D000880 ORTHO05D009684 2.8e-23 114.8 307 53.1
ECA232G0576 Erigeron canadensis HOM05D000880 ORTHO05D009684 3.7e-23 114.4 118 50.8
Lj3g0007027 Lotus japonicus HOM05D000880 ORTHO05D009684 6.3e-23 113.6 316 40.8
Sed0004667 Sechium edule HOM05D000880 ORTHO05D009684 6.3e-23 113.6 308 48.7
Haze_10332 Corylus avellana HOM05D000880 ORTHO05D009684 1.4e-22 112.5 203 70.4
Aa31LG10G9610 Aethionema arabicum HOM05D000880 ORTHO05D009684 4.1e-22 110.9 241 54.8
Eucgr.H00073 Eucalyptus grandis HOM05D000880 ORTHO05D009684 5.3e-22 110.5 301 54.2
Psat6g031840 Pisum sativum HOM05D000880 ORTHO05D009684 9.0e-22 109.8 310 52.3
A06p35600 Brassica napus HOM05D000880 ORTHO05D009684 1.5e-21 109.0 307 51.5
Aa31LG10G9680 Aethionema arabicum HOM05D000880 ORTHO05D009684 2.0e-21 108.6 318 50.6
C07p42940 Brassica napus HOM05D000880 ORTHO05D009684 1.3e-20 105.9 307 51.1
BraA06t26485Z Brassica rapa HOM05D000880 ORTHO05D009684 2.2e-20 105.1 302 50.3
BolC7t44823H Brassica oleracea HOM05D000880 ORTHO05D009684 3.8e-20 104.4 295 51.9
TPR.G12115 Trifolium pratense HOM05D000880 ORTHO05D009684 2.5e-19 101.7 305 49.5
ECA236G3570 Erigeron canadensis HOM05D000705 ORTHO05D002970 4.2e-19 100.9 108 51.9
Sc07g0001710 Simmondsia chinensis HOM05D000880 ORTHO05D009684 4.2e-19 100.9 156 37.8
Sp2g22620 Schrenkiella parvula HOM05D000880 ORTHO05D009684 1.2e-18 99.4 302 50.7
EL10Ac6g15284 Beta vulgaris HOM05D000880 ORTHO05D009684 1.6e-18 99.0 225 66.2
AUR62003593 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.6e-18 99.0 244 51.6
AUR62017906 Chenopodium quinoa HOM05D000880 ORTHO05D009684 1.6e-18 99.0 249 50.6
MBI13_g01685_MAGBIO Magnolia biondii HOM05D000880 ORTHO05D001950 1.8e-17 95.5 184 35.3
Ah.02g121750 Amaranthus hybridus HOM05D000880 ORTHO05D009684 2.3e-17 95.1 221 62.0
CSS0003109 Camellia sinensis var. sinensis HOM05D000880 ORTHO05D009684 4.3e-16 90.9 88 55.7
PSO017G1147 Papaver somniferum HOM05D000880 ORTHO05D001950 2.2e-15 88.6 181 32.0
Thhalv10003880m.g Eutrema salsugineum HOM05D000880 ORTHO05D009684 2.8e-15 88.2 299 50.2
CiPaw.15G081300 Carya illinoinensis HOM05D000880 ORTHO05D009684 1.4e-14 85.9 89 52.8
Carub.0006s2268 Capsella rubella HOM05D000880 ORTHO05D009684 3.4e-13 81.3 161 34.8
BcaNung01260 Brassica carinata HOM05D000880 ORTHO05D009684 7.7e-13 80.1 170 33.5
Glyma.15G236000 Glycine max HOM05D000880 ORTHO05D009684 1.0e-12 79.7 190 54.7
CARHR188620 Cardamine hirsuta HOM05D000880 ORTHO05D009684 2.2e-12 78.6 174 32.8
DCAR_017077 Daucus carota HOM05D000880 ORTHO05D009684 8.5e-12 76.6 57 61.4
MD15G1110300 Malus domestica HOM05D000880 ORTHO05D009684 2.5e-11 75.1 191 61.8
AT5G24830 Arabidopsis thaliana HOM05D000880 ORTHO05D009684 5.5e-11 73.9 171 33.3
Cpa.g.sc10.208 Carica papaya HOM05D000880 ORTHO05D009684 9.4e-11 73.2 74 55.4
AL6G36470 Arabidopsis lyrata HOM05D000880 ORTHO05D009684 1.0e-09 69.7 288 47.9
HPP92_017364 Vanilla planifolia HOM05D003382 ORTHO05D003930 1.5e-08 65.9 150 26.0
DCAR_017076 Daucus carota HOM05D000880 ORTHO05D009684 4.8e-07 60.8 109 40.4


User provided reference genes

Program Settings