Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A901T13 Lonicera japonica HOM05D003526 ORTHO05D235818 1.7e-30 136.0 103 100.0
THA.LOC104815322 Tarenaya hassleriana HOM05D003526 ORTHO05D004123 9.0e-16 87.0 102 58.8
arahy.Tifrunner.gnm1.ann1.C7EUSB Arachis hypogaea HOM05D003526 ORTHO05D004123 4.4e-15 84.7 104 71.2
arahy.Tifrunner.gnm1.ann1.RY2Z4G Arachis hypogaea HOM05D003526 ORTHO05D004123 4.4e-15 84.7 104 71.2
Oeu049520.1 Olea europaea HOM05D003526 ORTHO05D004123 7.6e-15 84.0 105 72.4
VMungo0331G1243 Vigna mungo HOM05D003526 ORTHO05D004123 3.8e-14 81.6 103 68.9
QL05p008227 Quercus lobata HOM05D003526 ORTHO05D004123 4.9e-14 81.3 84 81.0
Aqoxy2G04049 Aquilegia oxysepala HOM05D003526 ORTHO05D004123 6.4e-14 80.9 105 74.3
Gorai.010G086700 Gossypium raimondii HOM05D003526 ORTHO05D004123 6.4e-14 80.9 84 85.7
unitig_26.g9178 Utricularia gibba HOM05D003526 ORTHO05D004123 1.1e-13 80.1 104 71.2
Glyma.17G051000 Glycine max HOM05D003526 ORTHO05D004123 5.4e-13 77.8 100 62.0
Dinv42370 Davidia involucrata HOM05D003526 ORTHO05D004123 9.3e-13 77.0 104 68.3
Lj4A909T82 Lonicera japonica HOM05D003526 ORTHO05D004123 9.3e-13 77.0 102 73.5
Lju5057A0G54 Lonicera japonica HOM05D003526 ORTHO05D004123 9.3e-13 77.0 102 73.5
Gohir.D06G074300 Gossypium hirsutum HOM05D003526 ORTHO05D004123 2.1e-12 75.9 43 88.4
PSO421G0535 Papaver somniferum HOM05D003526 ORTHO05D004123 2.1e-12 75.9 102 67.6
PSO063G2352 Papaver somniferum HOM05D003526 ORTHO05D004123 4.6e-12 74.7 84 76.2
VMungo1215G2335 Vigna mungo HOM05D003526 ORTHO05D004123 4.6e-12 74.7 100 60.0
Phvul.003G132700 Phaseolus vulgaris HOM05D003526 ORTHO05D004123 1.0e-11 73.6 104 65.4
HPP92_012587 Vanilla planifolia HOM05D003526 ORTHO05D004123 3.9e-11 71.6 104 72.1
CANSAT56G1600 Cannabis sativa HOM05D003526 ORTHO05D004123 5.1e-11 71.2 43 79.1
CANSAT56G2739 Cannabis sativa HOM05D003526 ORTHO05D004123 5.1e-11 71.2 43 79.1
Nn7g37726 Nelumbo nucifera HOM05D003526 ORTHO05D004123 5.1e-11 71.2 85 75.3
CBR_g31704 Chara braunii HOM05D003526 ORTHO05D004123 1.1e-10 70.1 84 45.2
Zm00001eb164660 Zea mays HOM05D003526 ORTHO05D004123 1.9e-10 69.3 41 82.9
Os11g0703400 Oryza sativa ssp. japonica HOM05D003526 ORTHO05D004123 2.5e-10 68.9 84 76.2
Psat1g133000 Pisum sativum HOM05D003526 ORTHO05D004123 2.5e-10 68.9 102 62.7
Os07g0236800 Oryza sativa ssp. japonica HOM05D003526 ORTHO05D004123 7.3e-10 67.4 40 80.0
Hund08715 Selenicereus undatus HOM05D003526 ORTHO05D004123 7.3e-10 67.4 104 67.3
Gohir.A07G013800 Gossypium hirsutum HOM05D003526 ORTHO05D004123 9.6e-10 67.0 104 66.3
Gohir.D07G013600 Gossypium hirsutum HOM05D003526 ORTHO05D004123 9.6e-10 67.0 104 66.3
Gorai.001G014300 Gossypium raimondii HOM05D003526 ORTHO05D004123 9.6e-10 67.0 104 66.3
Medtr2g041190 Medicago truncatula HOM05D003526 ORTHO05D004123 1.6e-09 66.2 102 67.6
CDE02G2200 Ceratophyllum demersum HOM05D003526 ORTHO05D004123 6.2e-09 64.3 84 71.4
CDE09G0837 Ceratophyllum demersum HOM05D003526 ORTHO05D004123 6.2e-09 64.3 84 71.4
MBI05_g06550_MAGBIO Magnolia biondii HOM05D003526 ORTHO05D004123 6.2e-09 64.3 95 44.2
Glyma.13G108400 Glycine max HOM05D003526 ORTHO05D004123 3.1e-08 62.0 41 70.7
PRCOL_00001326 Prasinoderma coloniale HOM05D003526 ORTHO05D004123 5.3e-08 61.2 43 69.8
SMO169G0060 Selaginella moellendorffii HOM05D003526 ORTHO05D004123 5.3e-08 61.2 89 65.2
Lj3g0009274 Lotus japonicus HOM05D003526 ORTHO05D004123 3.4e-07 58.5 103 65.0
Eucgr.J02828 Eucalyptus grandis HOM05D003526 ORTHO05D004123 1.7e-06 56.2 102 57.8
Pp3c13_8060 Physcomitrium patens HOM05D003526 ORTHO05D004123 1.7e-06 56.2 102 56.9
Cc06_g11900 Coffea canephora HOM05D003526 ORTHO05D004123 2.2e-06 55.8 104 63.5
ECA234G2483 Erigeron canadensis HOM05D003526 ORTHO05D004123 2.2e-06 55.8 100 64.0
CAN.G1963.11 Capsicum annuum HOM05D003526 ORTHO05D004123 3.8e-06 55.1 105 61.0
Migut.J00951 Erythranthe guttata HOM05D003526 ORTHO05D004123 3.8e-06 55.1 104 57.7
Oeu000304.1 Olea europaea HOM05D003526 ORTHO05D004123 3.8e-06 55.1 104 64.4
Pp3c3_3880 Physcomitrium patens HOM05D003526 ORTHO05D004123 3.8e-06 55.1 102 53.9
Solyc12g009060.2 Solanum lycopersicum HOM05D003526 ORTHO05D004123 3.8e-06 55.1 105 61.0
Sopen12g003990 Solanum pennellii HOM05D003526 ORTHO05D004123 3.8e-06 55.1 105 61.0
PGSC0003DMG400000328 Solanum tuberosum HOM05D003526 ORTHO05D004123 3.8e-06 55.1 105 61.0
CSS0009903 Camellia sinensis var. sinensis HOM05D003526 ORTHO05D004123 4.9e-06 54.7 98 66.3
Lalb_Chr07g0181061 Lupinus albus HOM05D003526 ORTHO05D004123 4.9e-06 54.7 100 56.0
Phvul.010G132400 Phaseolus vulgaris HOM05D003526 ORTHO05D004123 6.4e-06 54.3 104 56.7
Cpa.g.sc25.103 Carica papaya HOM05D003526 ORTHO05D004123 8.4e-06 53.9 102 59.8
Sc18g0002400 Simmondsia chinensis HOM05D003526 ORTHO05D004123 8.4e-06 53.9 104 61.5
TAR626G1068 Trochodendron aralioides HOM05D003526 ORTHO05D004123 8.4e-06 53.9 105 62.9
Zm00001eb303830 Zea mays HOM05D003526 ORTHO05D004123 8.4e-06 53.9 84 70.2


User provided reference genes

Program Settings