Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A897G79 Lonicera japonica HOM05D005154 ORTHO05D006270 6.9e-79 297.4 162 100.0
Dinv13215 Davidia involucrata HOM05D005154 ORTHO05D006270 1.9e-49 199.5 158 71.5
Hma1.2p1_0019F.1_g013610 Hydrangea macrophylla HOM05D005154 ORTHO05D006270 1.5e-46 189.9 160 67.5
Sopen11g004840 Solanum pennellii HOM05D005154 ORTHO05D006270 2.5e-44 182.6 162 64.2
PGSC0003DMG400016159 Solanum tuberosum HOM05D005154 ORTHO05D006270 7.9e-43 177.6 152 67.1
CSS0008069 Camellia sinensis var. sinensis HOM05D005154 ORTHO05D006270 1.0e-42 177.2 159 64.2
CAN.G905.36 Capsicum annuum HOM05D005154 ORTHO05D006270 1.0e-42 177.2 152 67.1
Nitab4.5_0004570g0010 Nicotiana tabacum HOM05D005154 ORTHO05D006270 2.3e-42 176.0 163 63.2
Actinidia28853 Actinidia chinensis HOM05D005154 ORTHO05D006270 8.8e-42 174.1 158 65.2
Solyc11g009070.2 Solanum lycopersicum HOM05D005154 ORTHO05D006270 1.1e-41 173.7 159 63.5
Haze_24872 Corylus avellana HOM05D005154 ORTHO05D006270 1.5e-41 173.3 140 70.0
Haze_24881 Corylus avellana HOM05D005154 ORTHO05D006270 1.5e-41 173.3 140 70.0
Cfa002623 Carpinus fangiana HOM05D005154 ORTHO05D006270 2.5e-41 172.6 140 70.0
Eucgr.I00513 Eucalyptus grandis HOM05D005154 ORTHO05D006270 4.3e-41 171.8 146 67.1
MSTRG.3768 Avicennia marina HOM05D005154 ORTHO05D006270 2.2e-40 169.5 159 59.1
Gohir.D03G039500 Gossypium hirsutum HOM05D005154 ORTHO05D006270 3.7e-40 168.7 162 63.0
Manes.12G131800 Manihot esculenta HOM05D005154 ORTHO05D006270 3.7e-40 168.7 132 72.7
Peaxi162Scf00381g00914 Petunia axillaris HOM05D005154 ORTHO05D006270 4.8e-40 168.3 155 65.8
Potri.007G095600 Populus trichocarpa HOM05D005154 ORTHO05D006270 6.3e-40 167.9 153 64.1
Cc07_g14830 Coffea canephora HOM05D005154 ORTHO05D006270 1.8e-39 166.4 157 63.1
Gohir.A02G128100 Gossypium hirsutum HOM05D005154 ORTHO05D006270 1.8e-39 166.4 160 62.5
Lsat_1_v5_gn_2_66460 Lactuca sativa HOM05D005154 ORTHO05D006270 1.8e-39 166.4 135 68.9
Gorai.003G040700 Gossypium raimondii HOM05D005154 ORTHO05D006270 2.4e-39 166.0 160 62.5
Ciclev10026087m.g Citrus clementina HOM05D005154 ORTHO05D006270 3.1e-39 165.6 150 66.0
COL.COLO4_27276 Corchorus olitorius HOM05D005154 ORTHO05D006270 3.1e-39 165.6 150 66.0
Duzib147G1408 Durio zibethinus HOM05D005154 ORTHO05D006270 4.1e-39 165.2 150 68.0
Cpa.g.sc55.88 Carica papaya HOM05D005154 ORTHO05D006270 5.3e-39 164.9 129 74.4
TWI77G0548 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 5.3e-39 164.9 135 68.1
Atru.chr3.1372 Acer truncatum HOM05D005154 ORTHO05D006270 1.5e-38 163.3 124 73.4
Thecc.01G097800 Theobroma cacao HOM05D005154 ORTHO05D006270 2.0e-38 162.9 153 63.4
Duzib187G0267 Durio zibethinus HOM05D005154 ORTHO05D006270 2.6e-38 162.5 141 68.1
QL06p048470 Quercus lobata HOM05D005154 ORTHO05D006270 2.6e-38 162.5 137 70.1
ECA238G2162 Erigeron canadensis HOM05D005154 ORTHO05D001925 7.7e-38 161.0 131 71.8
PGR004G1180 Punica granatum HOM05D005154 ORTHO05D006270 1.0e-37 160.6 141 66.0
Sabra05G0060000 Salix brachista HOM05D005154 ORTHO05D006270 1.0e-37 160.6 150 62.0
HanXRQChr14g0445521 Helianthus annuus HOM05D005154 ORTHO05D006270 1.7e-37 159.8 134 66.4
vmacro18586 Vaccinium macrocarpon HOM05D005154 ORTHO05D006270 1.7e-37 159.8 154 63.6
MSTRG.2575 Avicennia marina HOM05D005154 ORTHO05D006270 2.9e-37 159.1 149 60.4
CiPaw.03G144000 Carya illinoinensis HOM05D005154 ORTHO05D006270 2.9e-37 159.1 140 68.6
Sabra07G0078700 Salix brachista HOM05D005154 ORTHO05D006270 2.9e-37 159.1 142 64.1
Glyma.05G176600 Glycine max HOM05D005154 ORTHO05D006270 5.0e-37 158.3 135 66.7
Nn5g28615 Nelumbo nucifera HOM05D005154 ORTHO05D006270 5.0e-37 158.3 153 62.1
TWI53G2081 Tripterygium wilfordii HOM05D005154 ORTHO05D006270 8.5e-37 157.5 138 65.9
VMungo0251G0355 Vigna mungo HOM05D005154 ORTHO05D006270 8.5e-37 157.5 127 70.9
Rhsim08G0012700 Rhododendron simsii HOM05D005154 ORTHO05D006270 1.1e-36 157.1 151 64.2
Migut.L00147 Erythranthe guttata HOM05D005154 ORTHO05D006270 1.4e-36 156.8 133 65.4
Potri.005G073500 Populus trichocarpa HOM05D005154 ORTHO05D006270 1.4e-36 156.8 150 62.0
SGA_v2.0_scaffold111G31501 Striga asiatica HOM05D005154 ORTHO05D006270 1.4e-36 156.8 149 58.4
EL10Ac6g15137 Beta vulgaris HOM05D005154 ORTHO05D006270 1.9e-36 156.4 146 62.3
Lj4g0010322 Lotus japonicus HOM05D005154 ORTHO05D006270 1.9e-36 156.4 132 65.9
Actinidia20002 Actinidia chinensis HOM05D005154 ORTHO05D006270 2.5e-36 156.0 117 71.8
TAR633G1456 Trochodendron aralioides HOM05D005154 ORTHO05D006270 3.2e-36 155.6 119 73.1
AUR62003820 Chenopodium quinoa HOM05D005154 ORTHO05D006270 5.5e-36 154.8 145 60.7
DCAR_014210 Daucus carota HOM05D005154 ORTHO05D006270 5.5e-36 154.8 159 56.0
Ca_17754_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 1.2e-35 153.7 141 62.4
TPR.G6195 Trifolium pratense HOM05D005154 ORTHO05D006270 3.6e-35 152.1 141 63.1
PSO210G3532 Papaver somniferum HOM05D005154 ORTHO05D006270 4.7e-35 151.8 147 62.6
TAR362G0353 Trochodendron aralioides HOM05D005154 ORTHO05D006270 4.7e-35 151.8 141 64.5
MBI02_g02178_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 6.1e-35 151.4 104 79.8
Nn1g06223 Nelumbo nucifera HOM05D005154 ORTHO05D006270 6.1e-35 151.4 140 62.9
BcaB07g34227 Brassica carinata HOM05D005154 ORTHO05D006270 1.4e-34 150.2 109 75.2
ATR1133G017 Amborella trichopoda HOM05D005154 ORTHO05D006270 1.8e-34 149.8 133 66.2
Medtr8g089995 Medicago truncatula HOM05D005154 ORTHO05D006270 1.8e-34 149.8 141 61.0
GSVIVG01006633001 Vitis vinifera HOM05D005154 ORTHO05D006270 2.3e-34 149.4 141 64.5
FvH4_1g20490 Fragaria vesca HOM05D005154 ORTHO05D006270 3.9e-34 148.7 140 65.0
MD00G1037300 Malus domestica HOM05D005154 ORTHO05D006270 3.9e-34 148.7 144 66.0
PSO447G0271 Papaver somniferum HOM05D005154 ORTHO05D006270 3.9e-34 148.7 148 61.5
BolC2t12462H Brassica oleracea HOM05D005154 ORTHO05D006270 5.1e-34 148.3 118 68.6
CARHR279200 Cardamine hirsuta HOM05D005154 ORTHO05D006270 5.1e-34 148.3 121 68.6
Migut.H02344 Erythranthe guttata HOM05D005154 ORTHO05D006270 5.1e-34 148.3 123 66.7
RcHm_v2.0_Chr2g0112751 Rosa chinensis HOM05D005154 ORTHO05D006270 5.1e-34 148.3 140 64.3
AUR62001985 Chenopodium quinoa HOM05D005154 ORTHO05D006270 6.7e-34 147.9 149 57.7
Thhalv10004756m.g Eutrema salsugineum HOM05D005154 ORTHO05D006270 6.7e-34 147.9 109 73.4
SalBow3G3886 Salvia bowleyana HOM05D005154 ORTHO05D006270 6.7e-34 147.9 155 55.5
SalBow3G4482 Salvia bowleyana HOM05D005154 ORTHO05D006270 6.7e-34 147.9 155 55.5
FAN23G2516 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.1e-33 147.1 140 64.3
FAN28G0994 Fragaria x ananassa HOM05D005154 ORTHO05D006270 1.1e-33 147.1 140 64.3
Phvul.002G257700 Phaseolus vulgaris HOM05D005154 ORTHO05D006270 1.1e-33 147.1 113 71.7
BraA02t09304Z Brassica rapa HOM05D005154 ORTHO05D006270 1.5e-33 146.7 118 67.8
A02p43800 Brassica napus HOM05D005154 ORTHO05D006270 2.0e-33 146.4 109 71.6
BolC3t18339H Brassica oleracea HOM05D002046 ORTHO05D002180 2.0e-33 146.4 124 66.1
AL8G42810 Arabidopsis lyrata HOM05D005154 ORTHO05D006270 2.6e-33 146.0 123 67.5
C03p60830 Brassica napus HOM05D005154 ORTHO05D006270 2.6e-33 146.0 124 66.9
MELO3C007745.2 Cucumis melo HOM05D005154 ORTHO05D006270 2.6e-33 146.0 115 70.4
Sp2g28350 Schrenkiella parvula HOM05D005154 ORTHO05D006270 2.6e-33 146.0 137 62.8
SGA_v2.0_scaffold335G49113 Striga asiatica HOM05D005154 ORTHO05D006270 2.6e-33 146.0 131 65.6
Aa31LG1G16710 Aethionema arabicum HOM05D005154 ORTHO05D006270 4.4e-33 145.2 127 64.6
BcaC01g02761 Brassica carinata HOM05D005154 ORTHO05D006270 4.4e-33 145.2 124 65.3
Carub.0008s2612 Capsella rubella HOM05D005154 ORTHO05D006270 4.4e-33 145.2 128 67.2
SalBow5G0552 Salvia bowleyana HOM05D005154 ORTHO05D006270 5.7e-33 144.8 142 57.7
Lalb_Chr07g0185271 Lupinus albus HOM05D005154 ORTHO05D006270 1.3e-32 143.7 130 66.9
A06p32100 Brassica napus HOM05D005154 ORTHO05D006270 1.7e-32 143.3 129 63.6
BraA06t26139Z Brassica rapa HOM05D005154 ORTHO05D006270 1.7e-32 143.3 129 63.6
CsaV3_6G045320 Cucumis sativus L. HOM05D005154 ORTHO05D006270 2.2e-32 142.9 137 60.6
Hund13599 Selenicereus undatus HOM05D005154 ORTHO05D006270 3.7e-32 142.1 154 57.8
FAN19G2087 Fragaria x ananassa HOM05D005154 ORTHO05D006270 4.8e-32 141.7 147 61.9
arahy.Tifrunner.gnm1.ann1.LGH16T Arachis hypogaea HOM05D005154 ORTHO05D006270 8.2e-32 141.0 141 60.3
MBI02_g27971_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 4.1e-31 138.7 134 64.2
arahy.Tifrunner.gnm1.ann1.0B7H6P Arachis hypogaea HOM05D005154 ORTHO05D006270 9.1e-31 137.5 141 58.9
Oeu001799.2 Olea europaea HOM05D005154 ORTHO05D006270 2.0e-30 136.3 210 45.7
C02p63960 Brassica napus HOM05D005154 ORTHO05D006270 2.6e-30 136.0 125 62.4
CDE05G0874 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 2.6e-30 136.0 111 69.4
THA.LOC104798878 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 4.5e-30 135.2 103 69.9
PGR102G1872 Punica granatum HOM05D005154 ORTHO05D006270 7.7e-30 134.4 110 70.0
Sc03g0000070 Simmondsia chinensis HOM05D005154 ORTHO05D006270 7.7e-30 134.4 148 57.4
Sed0021389 Sechium edule HOM05D005154 ORTHO05D006270 1.0e-29 134.0 105 71.4
Aqoxy6G00745 Aquilegia oxysepala HOM05D005154 ORTHO05D006270 1.3e-29 133.7 155 54.8
MELO3C017601.2 Cucumis melo HOM05D005154 ORTHO05D006270 1.3e-29 133.7 140 57.1
THA.LOC104807680 Tarenaya hassleriana HOM05D005154 ORTHO05D006270 1.3e-29 133.7 153 54.2
ClCG07G017400 Citrullus lanatus HOM05D005154 ORTHO05D006270 2.9e-29 132.5 130 59.2
Sed0002157 Sechium edule HOM05D005154 ORTHO05D006270 1.1e-28 130.6 127 59.1
Oeu032406.1 Olea europaea HOM05D005154 ORTHO05D006270 1.5e-28 130.2 268 36.9
SEGI_40329 Sequoiadendron giganteum HOM05D005154 ORTHO05D006270 1.5e-28 130.2 148 56.8
HPP92_016780 Vanilla planifolia HOM05D005154 ORTHO05D006270 1.5e-28 130.2 117 67.5
Prupe.6G191100 Prunus persica HOM05D005154 ORTHO05D006270 3.2e-28 129.0 110 70.0
AT5G65250 Arabidopsis thaliana HOM05D005154 ORTHO05D006270 2.1e-27 126.3 135 56.3
Ca_16517_v3 Cicer arietinum L. HOM05D005154 ORTHO05D006270 1.4e-26 123.6 133 54.1
BcaNung07054 Brassica carinata HOM05D005154 ORTHO05D006270 3.0e-26 122.5 88 76.1
Glyma.08G134000 Glycine max HOM05D005154 ORTHO05D006270 1.1e-25 120.6 88 77.3
unitig_899.g14551 Utricularia gibba HOM05D005154 ORTHO05D006270 1.1e-25 120.6 161 47.2
Medtr3g086990 Medicago truncatula HOM05D005154 ORTHO05D006270 4.4e-25 118.6 114 59.6
Psat7g056800 Pisum sativum HOM05D005154 ORTHO05D006270 1.3e-24 117.1 118 56.8
Os08g0484800 Oryza sativa ssp. japonica HOM05D005154 ORTHO05D006270 9.1e-23 110.9 135 50.4
unitig_748.g8652 Utricularia gibba HOM05D005154 ORTHO05D006270 2.0e-22 109.8 105 57.1
ClCG01G018660 Citrullus lanatus HOM05D005154 ORTHO05D006270 2.7e-22 109.4 200 40.5
Sed0027637 Sechium edule HOM05D005154 ORTHO05D006270 1.0e-21 107.5 114 55.3
CDE03G0147 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 8.5e-21 104.4 108 57.4
CsaV3_UNG158170 Cucumis sativus L. HOM05D001364 ORTHO05D006270 1.5e-20 103.6 159 47.2
CsaV3_4G004630 Cucumis sativus L. HOM05D005154 ORTHO05D006270 2.1e-19 99.8 108 57.4
Psat5g090640 Pisum sativum HOM05D005154 ORTHO05D006270 6.1e-19 98.2 130 45.4
MD01G1033600 Malus domestica HOM05D005154 ORTHO05D006270 1.4e-18 97.1 95 65.3
Lj2C542T5 Lonicera japonica HOM05D005154 ORTHO05D006270 1.4e-15 87.0 55 80.0
SMO171G0129 Selaginella moellendorffii HOM05D005154 ORTHO05D006270 1.8e-15 86.7 120 43.3
Pp3c10_24690 Physcomitrium patens HOM05D005154 ORTHO05D006270 9.1e-15 84.3 112 43.8
CBR_g50776 Chara braunii HOM05D002289 ORTHO05D004369 1.2e-14 84.0 104 44.2
Mapoly0112s0020 Marchantia polymorpha HOM05D005154 ORTHO05D006270 2.0e-14 83.2 98 51.0
CiPaw.04G102700 Carya illinoinensis HOM05D005154 ORTHO05D006270 5.9e-14 81.6 52 80.8
Lj2C542T6 Lonicera japonica HOM05D005154 ORTHO05D006270 5.9e-14 81.6 99 52.5
CiPaw.11G071200 Carya illinoinensis HOM05D005154 ORTHO05D006270 1.0e-13 80.9 59 74.6
Nitab4.5_0000743g0090 Nicotiana tabacum HOM05D005154 ORTHO05D006270 1.3e-13 80.5 53 79.2
CsaV3_UNG129000 Cucumis sativus L. HOM05D005154 ORTHO05D006270 3.8e-13 79.0 91 56.0
CDE05G3641 Ceratophyllum demersum HOM05D005154 ORTHO05D006270 2.5e-12 76.3 47 80.9
AagrBONN_evm.TU.Sc2ySwM_344.1569 Anthoceros agrestis HOM05D005154 ORTHO05D006270 2.7e-11 72.8 100 41.0
CiPaw.02G062100 Carya illinoinensis HOM05D005154 ORTHO05D006270 4.0e-10 68.9 44 84.1
Actinidia28244 Actinidia chinensis HOM05D005154 ORTHO05D006270 1.5e-09 67.0 111 45.0
CsaV3_UNG223540 Cucumis sativus L. HOM05D005154 ORTHO05D006270 7.5e-09 64.7 106 48.1
MBI02_g48054_MAGBIO Magnolia biondii HOM05D005154 ORTHO05D006270 2.2e-08 63.2 49 73.5


User provided reference genes

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