Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A830T38 Lonicera japonica HOM05D005440 ORTHO05D007314 1.8e-56 222.2 106 100.0
Ciclev10011552m.g Citrus clementina HOM05D005440 ORTHO05D007314 5.2e-27 124.4 76 78.9
Atru.chr5.954 Acer truncatum HOM05D005440 ORTHO05D007314 1.5e-26 122.9 74 79.7
CSS0043590 Camellia sinensis var. sinensis HOM05D005440 ORTHO05D007314 2.0e-26 122.5 66 86.4
Potri.006G023400 Populus trichocarpa HOM05D005440 ORTHO05D007314 2.0e-26 122.5 76 76.3
Dinv02983 Davidia involucrata HOM05D005440 ORTHO05D007314 2.6e-26 122.1 76 76.3
Lj6g0026846 Lotus japonicus HOM05D005440 ORTHO05D007314 2.6e-26 122.1 76 75.0
Cc07_g20260 Coffea canephora HOM05D005440 ORTHO05D007314 3.4e-26 121.7 82 70.7
TPR.G33572 Trifolium pratense HOM05D005440 ORTHO05D007314 4.4e-26 121.3 82 72.0
Duzib138G1709 Durio zibethinus HOM05D005440 ORTHO05D007314 5.8e-26 120.9 76 73.7
Ca_16308_v3 Cicer arietinum L. HOM05D005440 ORTHO05D007314 7.5e-26 120.6 82 69.5
HanXRQChr15g0468881 Helianthus annuus HOM05D005440 ORTHO05D007314 7.5e-26 120.6 76 75.0
Oeu053137.1 Olea europaea HOM05D005440 ORTHO05D007314 7.5e-26 120.6 71 80.3
Lalb_Chr24g0402811 Lupinus albus HOM05D005440 ORTHO05D007314 9.8e-26 120.2 76 75.0
ECA233G3205 Erigeron canadensis HOM05D005440 ORTHO05D007314 1.3e-25 119.8 76 73.7
PGR004G2684 Punica granatum HOM05D005440 ORTHO05D007314 1.3e-25 119.8 76 76.3
RcHm_v2.0_Chr2g0153881 Rosa chinensis HOM05D005440 ORTHO05D007314 1.3e-25 119.8 76 73.7
GSVIVG01026115001 Vitis vinifera HOM05D005440 ORTHO05D007314 1.3e-25 119.8 76 73.7
Gohir.A07G081000 Gossypium hirsutum HOM05D005440 ORTHO05D007314 1.7e-25 119.4 76 72.4
Gorai.001G092600 Gossypium raimondii HOM05D005440 ORTHO05D007314 1.7e-25 119.4 76 72.4
Sabra06G0017100 Salix brachista HOM05D005440 ORTHO05D007314 2.2e-25 119.0 66 84.8
Sc15g0002420 Simmondsia chinensis HOM05D005440 ORTHO05D007314 2.2e-25 119.0 76 75.0
Actinidia12520 Actinidia chinensis HOM05D005440 ORTHO05D007314 2.9e-25 118.6 71 76.1
CiPaw.04G136100 Carya illinoinensis HOM05D005440 ORTHO05D007314 2.9e-25 118.6 74 75.7
Glyma.20G065600 Glycine max HOM05D005440 ORTHO05D007314 2.9e-25 118.6 76 75.0
Lsat_1_v5_gn_5_68301 Lactuca sativa HOM05D005440 ORTHO05D007314 2.9e-25 118.6 66 81.8
THA.LOC104800970 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 2.9e-25 118.6 76 72.4
CANSAT64G0070 Cannabis sativa HOM05D005440 ORTHO05D007314 4.9e-25 117.9 66 84.8
Lalb_Chr22g0360841 Lupinus albus HOM05D005440 ORTHO05D007314 4.9e-25 117.9 76 73.7
Phvul.006G001800 Phaseolus vulgaris HOM05D005440 ORTHO05D007314 4.9e-25 117.9 76 75.0
SalBow5G0813 Salvia bowleyana HOM05D005440 ORTHO05D007314 4.9e-25 117.9 70 80.0
CDE06G0633 Ceratophyllum demersum HOM05D005440 ORTHO05D007314 6.4e-25 117.5 66 84.8
Glyma.13G003900 Glycine max HOM05D005440 ORTHO05D007314 6.4e-25 117.5 76 73.7
TWI60G0164 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 6.4e-25 117.5 76 75.0
Duzib133G0846 Durio zibethinus HOM05D005440 ORTHO05D007314 8.3e-25 117.1 76 71.1
FvH4_6g39770 Fragaria vesca HOM05D005440 ORTHO05D007314 8.3e-25 117.1 76 72.4
FAN02G0818 Fragaria x ananassa HOM05D005440 ORTHO05D007314 8.3e-25 117.1 76 72.4
Potri.016G021900 Populus trichocarpa HOM05D005440 ORTHO05D007314 8.3e-25 117.1 76 75.0
Prupe.3G188100 Prunus persica HOM05D005440 ORTHO05D007314 8.3e-25 117.1 76 71.1
FAN05G0095 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.1e-24 116.7 66 81.8
Aa31LG5G4880 Aethionema arabicum HOM05D005440 ORTHO05D007314 1.4e-24 116.3 76 73.7
Aqoxy1G01485 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 1.4e-24 116.3 69 81.2
DCAR_009586 Daucus carota HOM05D005440 ORTHO05D007314 1.4e-24 116.3 76 71.1
FAN09G4325 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.4e-24 116.3 80 68.8
Gohir.D07G086600 Gossypium hirsutum HOM05D005440 ORTHO05D007314 1.4e-24 116.3 72 72.2
FAN14G2598 Fragaria x ananassa HOM05D005440 ORTHO05D007314 1.9e-24 115.9 76 71.1
Psat5g108160 Pisum sativum HOM05D005440 ORTHO05D007314 1.9e-24 115.9 82 68.3
Sabra16G0027400 Salix brachista HOM05D005440 ORTHO05D007314 1.9e-24 115.9 76 72.4
MD17G1127100 Malus domestica HOM05D005440 ORTHO05D007314 2.4e-24 115.5 76 75.0
Peaxi162Scf00525g00411 Petunia axillaris HOM05D005440 ORTHO05D007314 3.2e-24 115.2 76 73.7
SEGI_34757 Sequoiadendron giganteum HOM05D005440 ORTHO05D007314 3.2e-24 115.2 77 74.0
Hma1.2p1_1803F.1_g302990 Hydrangea macrophylla HOM05D005440 ORTHO05D007314 5.4e-24 114.4 76 69.7
Sed0022130 Sechium edule HOM05D005440 ORTHO05D007314 5.4e-24 114.4 76 71.1
CARHR125970 Cardamine hirsuta HOM05D005440 ORTHO05D007314 7.0e-24 114.0 76 71.1
MELO3C026396.2 Cucumis melo HOM05D005440 ORTHO05D007314 7.0e-24 114.0 76 69.7
CsaV3_4G032220 Cucumis sativus L. HOM05D005440 ORTHO05D007314 7.0e-24 114.0 76 69.7
Thhalv10017571m.g Eutrema salsugineum HOM05D005440 ORTHO05D007314 7.0e-24 114.0 76 71.1
Medtr3g081180 Medicago truncatula HOM05D005440 ORTHO05D007314 9.2e-24 113.6 76 72.4
AL4G27520 Arabidopsis lyrata HOM05D005440 ORTHO05D007314 1.2e-23 113.2 76 71.1
Carub.0004s1349 Capsella rubella HOM05D005440 ORTHO05D007314 1.2e-23 113.2 76 71.1
Nn5g27478 Nelumbo nucifera HOM05D005440 ORTHO05D007314 1.2e-23 113.2 76 71.1
QL04p060188 Quercus lobata HOM05D005440 ORTHO05D007314 1.2e-23 113.2 76 69.7
THA.LOC104826162 Tarenaya hassleriana HOM05D005440 ORTHO05D007314 1.2e-23 113.2 76 71.1
BcaC02g07946 Brassica carinata HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 71.1
A04p24740 Brassica napus HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 71.1
BolC4t27650H Brassica oleracea HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 71.1
BraA04t17992Z Brassica rapa HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 71.1
Eucgr.K01335 Eucalyptus grandis HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 75.0
TAR627G1033 Trochodendron aralioides HOM05D005440 ORTHO05D007314 1.6e-23 112.8 76 71.1
Migut.L00575 Erythranthe guttata HOM05D005440 ORTHO05D007314 2.0e-23 112.5 71 74.6
Sp4g14550 Schrenkiella parvula HOM05D005440 ORTHO05D007314 2.0e-23 112.5 76 71.1
vmacro08748 Vaccinium macrocarpon HOM05D005440 ORTHO05D007314 2.0e-23 112.5 74 73.0
SGA_v2.0_scaffold35G13960 Striga asiatica HOM05D005440 ORTHO05D007314 2.7e-23 112.1 76 71.1
ATR0763G213 Amborella trichopoda HOM05D005440 ORTHO05D007314 3.5e-23 111.7 76 69.7
AT2G32170 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 3.5e-23 111.7 76 69.7
C04p61670 Brassica napus HOM05D005440 ORTHO05D007314 3.5e-23 111.7 76 69.7
MD09G1136900 Malus domestica HOM05D005440 ORTHO05D007314 3.5e-23 111.7 76 71.1
BcaB06g28584 Brassica carinata HOM05D005440 ORTHO05D007314 4.6e-23 111.3 76 71.1
CAN.G1156.52 Capsicum annuum HOM05D005440 ORTHO05D007314 6.0e-23 110.9 76 71.1
HPP92_001868 Vanilla planifolia HOM05D005440 ORTHO05D007314 6.0e-23 110.9 76 71.1
MSTRG.15262 Avicennia marina HOM05D005440 ORTHO05D007314 7.8e-23 110.5 76 69.7
ClCG11G016720 Citrullus lanatus HOM05D005440 ORTHO05D007314 1.3e-22 109.8 76 67.1
Solyc05g056520.4 Solanum lycopersicum HOM05D005440 ORTHO05D007314 1.3e-22 109.8 76 71.1
Sopen05g034920 Solanum pennellii HOM05D005440 ORTHO05D007314 1.3e-22 109.8 76 71.1
CARHR125960 Cardamine hirsuta HOM05D005440 ORTHO05D007314 2.3e-22 109.0 76 68.4
AT2G32160 Arabidopsis thaliana HOM05D005440 ORTHO05D007314 3.9e-22 108.2 76 71.1
Aqoxy1G03388 Aquilegia oxysepala HOM05D005440 ORTHO05D007314 5.0e-22 107.8 69 78.3
Cfa023527 Carpinus fangiana HOM05D005440 ORTHO05D007314 6.6e-22 107.5 76 69.7
PSO675G6996 Papaver somniferum HOM05D005440 ORTHO05D007314 6.6e-22 107.5 70 71.4
Manes.09G077000 Manihot esculenta HOM05D005440 ORTHO05D007314 8.6e-22 107.1 76 71.1
TWI60G0012 Tripterygium wilfordii HOM05D005440 ORTHO05D007314 1.9e-21 105.9 66 78.8
AUR62017608 Chenopodium quinoa HOM05D005440 ORTHO05D007314 5.6e-21 104.4 76 69.7
AUR62015149 Chenopodium quinoa HOM05D005440 ORTHO05D007314 7.3e-21 104.0 76 69.7
Os05g0511300 Oryza sativa ssp. japonica HOM05D005440 ORTHO05D007314 7.3e-21 104.0 76 65.8
Zm00001eb292540 Zea mays HOM05D005440 ORTHO05D007314 1.2e-20 103.2 76 64.5
PSO541G5910 Papaver somniferum HOM05D005440 ORTHO05D007314 2.1e-20 102.4 59 79.7
Carub.0004s1348 Capsella rubella HOM05D005440 ORTHO05D007314 2.8e-20 102.1 76 64.5
unitig_32.g10657 Utricularia gibba HOM05D005440 ORTHO05D007314 1.1e-19 100.1 76 64.5
EL10Ac9g22859 Beta vulgaris HOM05D005440 ORTHO05D007314 1.4e-19 99.8 76 65.8
DCAR_019996 Daucus carota HOM05D005440 ORTHO05D007314 6.8e-19 97.4 76 63.2
Pp3c17_14810 Physcomitrium patens HOM05D005440 ORTHO05D007314 3.4e-18 95.1 77 58.4
Mapoly0014s0077 Marchantia polymorpha HOM05D005440 ORTHO05D007314 1.1e-16 90.1 79 55.7
AagrBONN_evm.TU.Sc2ySwM_368.3314 Anthoceros agrestis HOM05D005440 ORTHO05D007314 3.2e-16 88.6 79 57.0
Sabra16G0024900 Salix brachista HOM05D005440 ORTHO05D007314 1.6e-15 86.3 49 79.6
Rhsim12G0014000 Rhododendron simsii HOM05D005440 ORTHO05D007314 2.1e-15 85.9 50 80.0
Sabra16G0027100 Salix brachista HOM05D005440 ORTHO05D007314 4.6e-15 84.7 69 60.9
MBI18_g10015_MAGBIO Magnolia biondii HOM05D005440 ORTHO05D007314 5.1e-14 81.3 48 79.2
Haze_13637 Corylus avellana HOM05D005440 ORTHO05D007314 4.3e-13 78.2 49 73.5
Pp3c1_31970 Physcomitrium patens HOM05D005440 ORTHO05D007314 9.5e-13 77.0 78 52.6
arahy.Tifrunner.gnm1.ann1.TU4NXX Arachis hypogaea HOM05D005440 ORTHO05D007314 1.2e-12 76.6 41 90.2
arahy.Tifrunner.gnm1.ann1.Z94T11 Arachis hypogaea HOM05D005440 ORTHO05D007314 4.7e-12 74.7 40 90.0
SMO358G0560 Selaginella moellendorffii HOM05D005440 ORTHO05D007314 2.3e-11 72.4 59 66.1
CAN.G62.19 Capsicum annuum HOM05D001673 ORTHO05D013418 2.0e-10 69.3 46 71.7
CAN.G93.4 Capsicum annuum HOM05D000541 ORTHO05D000137 9.9e-10 67.0 41 78.0
Cre03.g188950 Chlamydomonas reinhardtii HOM05D005440 ORTHO05D007314 2.2e-09 65.9 73 45.2
CAN.G1245.16 Capsicum annuum HOM05D001673 ORTHO05D022156 8.4e-09 63.9 43 69.8
CAN.G80.1 Capsicum annuum HOM05D001673 ORTHO05D022156 1.4e-08 63.2 41 73.2
MCO05G304 Micromonas commoda HOM05D005440 ORTHO05D007314 9.2e-08 60.5 69 43.5
Atru.ctg1434.11 Acer truncatum HOM05D005440 ORTHO05D007314 1.6e-07 59.7 97 38.1
CBR_g29536 Chara braunii HOM05D000019 ORTHO05D000048 2.7e-07 58.9 59 54.2
Sabra16G0025200 Salix brachista HOM05D005440 ORTHO05D007314 3.9e-06 55.1 83 34.9


User provided reference genes

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