Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A830T33 Lonicera japonica HOM05D006331 ORTHO05D008043 3.2e-34 147.9 76 100.0
Nn5g28340 Nelumbo nucifera HOM05D006331 ORTHO05D008043 2.8e-30 134.8 74 89.2
Cfa002168 Carpinus fangiana HOM05D006331 ORTHO05D008043 8.0e-30 133.3 74 86.5
Ca_17611_v3 Cicer arietinum L. HOM05D006331 ORTHO05D008043 8.0e-30 133.3 74 85.1
Haze_25343 Corylus avellana HOM05D006331 ORTHO05D008043 1.1e-29 132.9 74 86.5
Cpa.g.sc37.37 Carica papaya HOM05D006331 ORTHO05D008043 4.0e-29 131.0 74 86.5
CiPaw.03G115600 Carya illinoinensis HOM05D006331 ORTHO05D008043 5.2e-29 130.6 74 85.1
Atru.chr4.1109 Acer truncatum HOM05D006331 ORTHO05D008043 6.8e-29 130.2 74 83.8
arahy.Tifrunner.gnm1.ann1.9C2QS4 Arachis hypogaea HOM05D006331 ORTHO05D008043 8.9e-29 129.8 74 81.1
arahy.Tifrunner.gnm1.ann1.GTTL2Q Arachis hypogaea HOM05D006331 ORTHO05D008043 8.9e-29 129.8 74 81.1
Eucgr.H05078 Eucalyptus grandis HOM05D006331 ORTHO05D008043 8.9e-29 129.8 73 83.6
Medtr8g094730 Medicago truncatula HOM05D006331 ORTHO05D008043 8.9e-29 129.8 75 80.0
Potri.007G098700 Populus trichocarpa HOM05D006331 ORTHO05D008043 8.9e-29 129.8 74 82.4
MD04G1081700 Malus domestica HOM05D006331 ORTHO05D008043 1.2e-28 129.4 74 83.8
Gorai.008G001100 Gossypium raimondii HOM05D006331 ORTHO05D008043 1.5e-28 129.0 74 81.1
Lj4g0002141 Lotus japonicus HOM05D006331 ORTHO05D008043 1.5e-28 129.0 74 83.8
Phvul.002G275600 Phaseolus vulgaris HOM05D006331 ORTHO05D008043 1.5e-28 129.0 74 82.4
Ciclev10000807m.g Citrus clementina HOM05D006331 ORTHO05D008043 2.0e-28 128.6 74 81.1
Glyma.05G195400 Glycine max HOM05D006331 ORTHO05D008043 2.0e-28 128.6 74 85.1
Hma1.2p1_2302F.1_g319320 Hydrangea macrophylla HOM05D006331 ORTHO05D008043 2.0e-28 128.6 74 82.4
FvH4_5g00410 Fragaria vesca HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 82.4
FAN13G1065 Fragaria x ananassa HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 82.4
FAN18G4276 Fragaria x ananassa HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 82.4
MBI06_g01071_MAGBIO Magnolia biondii HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 78.4
Prupe.5G076700 Prunus persica HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 82.4
RcHm_v2.0_Chr7g0202111 Rosa chinensis HOM05D006331 ORTHO05D008043 2.6e-28 128.3 74 82.4
TWI75G0452 Tripterygium wilfordii HOM05D006331 ORTHO05D008043 2.6e-28 128.3 73 83.6
CANSAT01G2335 Cannabis sativa HOM05D006331 ORTHO05D008043 3.4e-28 127.9 74 82.4
Gohir.D12G001700 Gossypium hirsutum HOM05D006331 ORTHO05D008043 3.4e-28 127.9 74 79.7
Sabra07G0082300 Salix brachista HOM05D006331 ORTHO05D008043 3.4e-28 127.9 74 81.1
Manes.10G075600 Manihot esculenta HOM05D006331 ORTHO05D008043 4.4e-28 127.5 74 82.4
Duzib264G0015 Durio zibethinus HOM05D006331 ORTHO05D008043 5.8e-28 127.1 74 82.4
QL10p040044 Quercus lobata HOM05D006331 ORTHO05D008043 5.8e-28 127.1 74 82.4
AUR62000551 Chenopodium quinoa HOM05D006331 ORTHO05D008043 7.5e-28 126.7 76 78.9
COL.COLO4_12111 Corchorus olitorius HOM05D006331 ORTHO05D008043 7.5e-28 126.7 74 81.1
Lalb_Chr12g0202951 Lupinus albus HOM05D006331 ORTHO05D008043 7.5e-28 126.7 74 81.1
Gohir.A12G001900 Gossypium hirsutum HOM05D006331 ORTHO05D008043 9.8e-28 126.3 74 79.7
TPR.G37385 Trifolium pratense HOM05D006331 ORTHO05D008043 9.8e-28 126.3 75 80.0
Aqoxy6G00239 Aquilegia oxysepala HOM05D006331 ORTHO05D008043 1.3e-27 125.9 74 79.7
AUR62006903 Chenopodium quinoa HOM05D006331 ORTHO05D008043 1.3e-27 125.9 76 78.9
VMungo0251G2607 Vigna mungo HOM05D006331 ORTHO05D008043 1.3e-27 125.9 74 79.7
HanXRQChr01g0017771 Helianthus annuus HOM05D006331 ORTHO05D008043 1.7e-27 125.6 74 78.4
GSVIVG01022367001 Vitis vinifera HOM05D006331 ORTHO05D008043 1.7e-27 125.6 74 79.7
CSS0035477 Camellia sinensis var. sinensis HOM05D006331 ORTHO05D008043 2.2e-27 125.2 74 78.4
Sc16g0009670 Simmondsia chinensis HOM05D006331 ORTHO05D008043 2.2e-27 125.2 73 79.5
Lsat_1_v5_gn_1_81581 Lactuca sativa HOM05D006331 ORTHO05D008043 3.7e-27 124.4 74 77.0
Psat7g043600 Pisum sativum HOM05D006331 ORTHO05D008043 4.9e-27 124.0 75 76.0
PGR102G1699 Punica granatum HOM05D006331 ORTHO05D008043 4.9e-27 124.0 74 77.0
AL6G19490 Arabidopsis lyrata HOM05D006331 ORTHO05D008043 6.4e-27 123.6 74 78.4
Carub.0006s0771 Capsella rubella HOM05D006331 ORTHO05D008043 6.4e-27 123.6 74 77.0
Migut.L00271 Erythranthe guttata HOM05D006331 ORTHO05D008043 6.4e-27 123.6 73 79.5
Migut.L00582 Erythranthe guttata HOM05D006331 ORTHO05D008043 6.4e-27 123.6 73 79.5
FAN04G0432 Fragaria x ananassa HOM05D006331 ORTHO05D008043 6.4e-27 123.6 69 82.6
Thecc.01G141800 Theobroma cacao HOM05D006331 ORTHO05D008043 6.4e-27 123.6 74 79.7
CARHR204260 Cardamine hirsuta HOM05D006331 ORTHO05D008043 8.3e-27 123.2 74 78.4
DCAR_013180 Daucus carota HOM05D006331 ORTHO05D008043 1.1e-26 122.9 74 75.7
CSS0012546 Camellia sinensis var. sinensis HOM05D006331 ORTHO05D008043 1.4e-26 122.5 74 75.7
Cc07_g19500 Coffea canephora HOM05D006331 ORTHO05D008043 1.9e-26 122.1 74 77.0
EL10Ac4g09668 Beta vulgaris HOM05D006331 ORTHO05D008043 2.4e-26 121.7 74 75.7
Oeu042319.1 Olea europaea HOM05D006331 ORTHO05D008043 2.4e-26 121.7 74 75.7
SalBow7G0499 Salvia bowleyana HOM05D006331 ORTHO05D008043 3.2e-26 121.3 74 74.3
Sp6g34130 Schrenkiella parvula HOM05D006331 ORTHO05D008043 3.2e-26 121.3 74 77.0
THA.LOC104819353 Tarenaya hassleriana HOM05D006331 ORTHO05D008043 3.2e-26 121.3 76 76.3
Actinidia16518 Actinidia chinensis HOM05D006331 ORTHO05D008043 5.4e-26 120.6 74 77.0
MSTRG.3598 Avicennia marina HOM05D006331 ORTHO05D008043 5.4e-26 120.6 72 77.8
MELO3C008946.2 Cucumis melo HOM05D006331 ORTHO05D008043 5.4e-26 120.6 72 76.4
Hund07213 Selenicereus undatus HOM05D006331 ORTHO05D008043 5.4e-26 120.6 74 75.7
Atru.BG.96.p Acer truncatum HOM05D006331 ORTHO05D008043 7.0e-26 120.2 67 85.1
CsaV3_4G030790 Cucumis sativus L. HOM05D006331 ORTHO05D008043 7.0e-26 120.2 72 76.4
ClCG04G001810 Citrullus lanatus HOM05D006331 ORTHO05D008043 9.2e-26 119.8 68 80.9
vmacro11024 Vaccinium macrocarpon HOM05D006331 ORTHO05D008043 9.2e-26 119.8 72 79.2
Ah.06g188590 Amaranthus hybridus HOM05D006331 ORTHO05D008043 2.0e-25 118.6 69 76.8
Thhalv10013258m.g Eutrema salsugineum HOM05D006331 ORTHO05D008043 2.0e-25 118.6 74 74.3
PSO170G3731 Papaver somniferum HOM05D006331 ORTHO05D008043 2.0e-25 118.6 73 75.3
AT5G08740 Arabidopsis thaliana HOM05D006331 ORTHO05D008043 2.7e-25 118.2 74 75.7
CSS0043984 Camellia sinensis var. sinensis HOM05D006331 ORTHO05D008043 2.7e-25 118.2 74 73.0
unitig_899.g14454 Utricularia gibba HOM05D006331 ORTHO05D008043 2.7e-25 118.2 73 72.6
PSO528G0231 Papaver somniferum HOM05D006331 ORTHO05D008043 3.5e-25 117.9 73 74.0
Sed0028082 Sechium edule HOM05D006331 ORTHO05D008043 3.5e-25 117.9 73 72.6
Aa31LG3G17820 Aethionema arabicum HOM05D006331 ORTHO05D008043 4.6e-25 117.5 74 73.0
ECA248G3631 Erigeron canadensis HOM05D002593 ORTHO05D006476 4.6e-25 117.5 65 83.1
TAR376G0453 Trochodendron aralioides HOM05D006331 ORTHO05D008043 6.0e-25 117.1 97 62.9
BcaB08g37229 Brassica carinata HOM05D006331 ORTHO05D008043 1.3e-24 115.9 74 73.0
A10p28040 Brassica napus HOM05D006331 ORTHO05D008043 1.3e-24 115.9 74 73.0
C09p68240 Brassica napus HOM05D006331 ORTHO05D008043 1.3e-24 115.9 74 73.0
BolC9t59572H Brassica oleracea HOM05D006331 ORTHO05D008043 1.3e-24 115.9 74 73.0
BraA10t44853Z Brassica rapa HOM05D006331 ORTHO05D008043 1.3e-24 115.9 74 73.0
Nitab4.5_0004338g0140 Nicotiana tabacum HOM05D006331 ORTHO05D008043 1.7e-24 115.5 74 74.3
PGSC0003DMG400016687 Solanum tuberosum HOM05D006331 ORTHO05D008043 2.3e-24 115.2 74 75.7
ATR0665G153 Amborella trichopoda HOM05D006331 ORTHO05D008043 5.0e-24 114.0 72 72.2
CAN.G11.28 Capsicum annuum HOM05D006331 ORTHO05D008043 5.0e-24 114.0 74 77.0
Nitab4.5_0002100g0110 Nicotiana tabacum HOM05D006331 ORTHO05D008043 5.0e-24 114.0 74 75.7
Sopen03g007600 Solanum pennellii HOM05D006331 ORTHO05D008043 3.3e-23 111.3 74 71.6
SGA_v2.0_scaffold143G35715 Striga asiatica HOM05D006331 ORTHO05D008043 4.3e-23 110.9 69 73.9
Solyc03g043750.3 Solanum lycopersicum HOM05D006331 ORTHO05D008043 7.3e-23 110.2 70 74.3
SalBow8G5220 Salvia bowleyana HOM05D006331 ORTHO05D008043 9.5e-23 109.8 74 68.9
HPP92_013148 Vanilla planifolia HOM05D006331 ORTHO05D008043 9.5e-23 109.8 74 64.9
CDE05G3097 Ceratophyllum demersum HOM05D006331 ORTHO05D008043 1.2e-22 109.4 72 68.1
Rhsim02G0171900 Rhododendron simsii HOM05D006331 ORTHO05D008043 3.1e-21 104.8 72 70.8
Os06g0214900 Oryza sativa ssp. japonica HOM05D006331 ORTHO05D008043 5.2e-21 104.0 72 62.5
Zm00001eb373110 Zea mays HOM05D006331 ORTHO05D008043 6.8e-21 103.6 70 64.3
Oeu050103.1 Olea europaea HOM05D006331 ORTHO05D008043 2.0e-20 102.1 69 65.2
AagrBONN_evm.TU.Sc2ySwM_228.1808 Anthoceros agrestis HOM05D006331 ORTHO05D008043 6.4e-19 97.1 72 58.3
SMO172G0167 Selaginella moellendorffii HOM05D006331 ORTHO05D008043 1.6e-17 92.4 67 59.7
Mapoly0183s0011 Marchantia polymorpha HOM05D006331 ORTHO05D008043 6.0e-17 90.5 72 56.9
SEGI_31237 Sequoiadendron giganteum HOM05D006331 ORTHO05D008043 7.8e-17 90.1 71 56.3
Pp3c24_18540 Physcomitrium patens HOM05D006331 ORTHO05D008043 1.0e-16 89.7 71 53.5
Lsat_1_v5_gn_1_80860 Lactuca sativa HOM05D006331 ORTHO05D008043 9.2e-10 66.6 35 85.7
MCO15G677 Micromonas commoda HOM05D006331 ORTHO05D008043 5.6e-07 57.4 56 48.2
PRCOL_00002259 Prasinoderma coloniale HOM05D006331 ORTHO05D008043 4.7e-06 54.3 82 40.2


User provided reference genes

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