Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A828G46 Lonicera japonica HOM05D006876 ORTHO05D008708 1.9e-74 282.3 135 100.0
MELO3C019167.2 Cucumis melo HOM05D006876 ORTHO05D008708 3.1e-48 195.3 113 77.0
CsaV3_4G029000 Cucumis sativus L. HOM05D006876 ORTHO05D008708 3.1e-48 195.3 113 77.0
Hma1.2p1_0694F.1_g204340 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 3.1e-48 195.3 119 73.1
DCAR_020618 Daucus carota HOM05D006876 ORTHO05D008708 4.0e-48 194.9 111 80.2
Atru.chr8.919 Acer truncatum HOM05D006876 ORTHO05D008708 8.9e-48 193.7 112 75.9
CiPaw.09G161500 Carya illinoinensis HOM05D006876 ORTHO05D008708 1.2e-47 193.4 112 71.4
Dinv13650 Davidia involucrata HOM05D006876 ORTHO05D008708 2.6e-47 192.2 110 76.4
Aqoxy1G01505 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 4.4e-47 191.4 119 70.6
vmacro07595 Vaccinium macrocarpon HOM05D006876 ORTHO05D008708 7.5e-47 190.7 118 72.0
Peaxi162Scf00003g05358 Petunia axillaris HOM05D006876 ORTHO05D008708 1.7e-46 189.5 110 74.5
Sed0006068 Sechium edule HOM05D006876 ORTHO05D008708 1.7e-46 189.5 111 75.7
Cpa.g.sc33.174 Carica papaya HOM05D006876 ORTHO05D008708 2.2e-46 189.1 110 71.8
ClCG04G005040 Citrullus lanatus HOM05D006876 ORTHO05D008708 2.2e-46 189.1 113 74.3
Hma1.2p1_0694F.1_g204350 Hydrangea macrophylla HOM05D006876 ORTHO05D008708 2.2e-46 189.1 108 75.9
MD12G1111100 Malus domestica HOM05D006876 ORTHO05D008708 2.9e-46 188.7 109 73.4
Cc06_g21190 Coffea canephora HOM05D006876 ORTHO05D008708 4.9e-46 188.0 110 75.5
CSS0024544 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 6.4e-46 187.6 119 69.7
Nitab4.5_0002131g0070 Nicotiana tabacum HOM05D006876 ORTHO05D008708 6.4e-46 187.6 115 72.2
RhsimUnG0021300 Rhododendron simsii HOM05D006876 ORTHO05D008708 6.4e-46 187.6 110 74.5
GSVIVG01025828001 Vitis vinifera HOM05D006876 ORTHO05D008708 6.4e-46 187.6 111 75.7
Sopen10g028620 Solanum pennellii HOM05D006876 ORTHO05D008708 8.3e-46 187.2 110 73.6
THA.LOC104803253 Tarenaya hassleriana HOM05D006876 ORTHO05D008708 8.3e-46 187.2 118 69.5
PGSC0003DMG400007191 Solanum tuberosum HOM05D006876 ORTHO05D008708 1.1e-45 186.8 110 73.6
MSTRG.10760 Avicennia marina HOM05D006876 ORTHO05D008708 1.9e-45 186.0 110 71.8
QL07p015416 Quercus lobata HOM05D006876 ORTHO05D008708 1.9e-45 186.0 112 71.4
TAR623G1567 Trochodendron aralioides HOM05D006876 ORTHO05D008708 1.9e-45 186.0 111 74.8
Lalb_Chr24g0400801 Lupinus albus HOM05D006876 ORTHO05D008708 2.4e-45 185.7 113 75.2
Prupe.7G023500 Prunus persica HOM05D006876 ORTHO05D008708 2.4e-45 185.7 111 73.0
PGR142G2444 Punica granatum HOM05D006876 ORTHO05D008708 2.4e-45 185.7 113 71.7
Solyc10g076930.2 Solanum lycopersicum HOM05D006876 ORTHO05D008708 3.2e-45 185.3 110 72.7
arahy.Tifrunner.gnm1.ann1.SXUX32 Arachis hypogaea HOM05D006876 ORTHO05D008708 4.1e-45 184.9 120 68.3
Migut.K00190 Erythranthe guttata HOM05D006876 ORTHO05D008708 5.4e-45 184.5 110 72.7
PSO339G4949 Papaver somniferum HOM05D006876 ORTHO05D008708 5.4e-45 184.5 118 66.9
PSO384G4569 Papaver somniferum HOM05D006876 ORTHO05D008708 5.4e-45 184.5 118 66.9
TWI53G1364 Tripterygium wilfordii HOM05D006876 ORTHO05D008708 5.4e-45 184.5 113 74.3
Nitab4.5_0000123g0090 Nicotiana tabacum HOM05D006876 ORTHO05D008708 7.1e-45 184.1 112 72.3
SGA_v2.0_scaffold123G33492 Striga asiatica HOM05D001269 ORTHO05D001083 7.1e-45 184.1 110 73.6
Manes.09G001600 Manihot esculenta HOM05D006876 ORTHO05D008708 1.2e-44 183.3 113 69.9
arahy.Tifrunner.gnm1.ann1.U8TZLL Arachis hypogaea HOM05D006876 ORTHO05D008708 1.6e-44 183.0 120 67.5
Aa31LG10G11670 Aethionema arabicum HOM05D006876 ORTHO05D008708 2.7e-44 182.2 119 67.2
Sp5g05770 Schrenkiella parvula HOM05D006876 ORTHO05D008708 2.7e-44 182.2 118 68.6
Carub.0005s2355 Capsella rubella HOM05D006876 ORTHO05D008708 4.6e-44 181.4 118 68.6
Ah.13g077470 Amaranthus hybridus HOM05D006876 ORTHO05D008708 6.0e-44 181.0 111 71.2
CARHR166970 Cardamine hirsuta HOM05D006876 ORTHO05D008708 6.0e-44 181.0 118 67.8
SalBow1G4764 Salvia bowleyana HOM05D006876 ORTHO05D008708 6.0e-44 181.0 109 67.9
Sc19g0007790 Simmondsia chinensis HOM05D006876 ORTHO05D008708 6.0e-44 181.0 112 70.5
CANSAT78G2074 Cannabis sativa HOM05D006876 ORTHO05D008708 7.8e-44 180.6 134 61.2
Ciclev10012641m.g Citrus clementina HOM05D006876 ORTHO05D008708 7.8e-44 180.6 111 73.9
MBI19_g10813_MAGBIO Magnolia biondii HOM05D006876 ORTHO05D008708 7.8e-44 180.6 111 74.8
Migut.K00192 Erythranthe guttata HOM05D006876 ORTHO05D008708 1.0e-43 180.3 110 70.9
Lj1g0024709 Lotus japonicus HOM05D006876 ORTHO05D008708 1.0e-43 180.3 113 71.7
RcHm_v2.0_Chr7g0183121 Rosa chinensis HOM05D006876 ORTHO05D008708 1.0e-43 180.3 112 68.8
AL5G38200 Arabidopsis lyrata HOM05D006876 ORTHO05D008708 1.3e-43 179.9 118 69.5
Eucgr.K01704 Eucalyptus grandis HOM05D006876 ORTHO05D008708 1.7e-43 179.5 111 71.2
A09p49640 Brassica napus HOM05D006876 ORTHO05D008708 2.3e-43 179.1 118 67.8
BraA09t40417Z Brassica rapa HOM05D006876 ORTHO05D008708 2.3e-43 179.1 118 67.8
FAN28G2491 Fragaria x ananassa HOM05D006876 ORTHO05D008708 3.0e-43 178.7 110 70.0
Cfa019902 Carpinus fangiana HOM05D006876 ORTHO05D008708 3.9e-43 178.3 110 68.2
Hund24486 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.9e-43 178.3 113 69.9
AT3G56820 Arabidopsis thaliana HOM05D006876 ORTHO05D008708 6.6e-43 177.6 118 68.6
CSS0021314 Camellia sinensis var. sinensis HOM05D006876 ORTHO05D008708 6.6e-43 177.6 109 71.6
Thhalv10006232m.g Eutrema salsugineum HOM05D006876 ORTHO05D008708 6.6e-43 177.6 118 67.8
FAN19G1913 Fragaria x ananassa HOM05D006876 ORTHO05D008708 8.6e-43 177.2 110 68.2
BcaC07g39992 Brassica carinata HOM05D006876 ORTHO05D008708 1.1e-42 176.8 118 66.9
C08p32050 Brassica napus HOM05D006876 ORTHO05D008708 1.1e-42 176.8 118 66.9
BolC8t50823H Brassica oleracea HOM05D006876 ORTHO05D008708 1.1e-42 176.8 118 66.9
COL.COLO4_21445 Corchorus olitorius HOM05D006876 ORTHO05D008708 1.5e-42 176.4 112 67.9
EL10Ac3g07376 Beta vulgaris HOM05D006876 ORTHO05D008708 2.5e-42 175.6 112 70.5
BcaC07g40117 Brassica carinata HOM05D006876 ORTHO05D008708 2.5e-42 175.6 118 65.3
Lsat_1_v5_gn_6_24200 Lactuca sativa HOM05D006876 ORTHO05D008708 7.3e-42 174.1 110 68.2
Medtr7g088040 Medicago truncatula HOM05D006876 ORTHO05D008708 7.3e-42 174.1 114 67.5
Phvul.001G101300 Phaseolus vulgaris HOM05D006876 ORTHO05D008708 7.3e-42 174.1 110 70.0
ECA233G0065 Erigeron canadensis HOM05D000444 ORTHO05D000489 9.5e-42 173.7 129 58.1
Psat3g083640 Pisum sativum HOM05D006876 ORTHO05D008708 2.8e-41 172.2 113 69.0
Potri.006G026300 Populus trichocarpa HOM05D006876 ORTHO05D008708 2.8e-41 172.2 111 66.7
Hund24492 Selenicereus undatus HOM05D006876 ORTHO05D008708 3.6e-41 171.8 113 69.9
Thecc.05G117700 Theobroma cacao HOM05D006876 ORTHO05D008708 3.6e-41 171.8 111 66.7
Oeu032953.2 Olea europaea HOM05D006876 ORTHO05D008708 4.7e-41 171.4 131 64.1
Haze_20349 Corylus avellana HOM05D006876 ORTHO05D008708 8.1e-41 170.6 111 64.0
Glyma.19G122400 Glycine max HOM05D006876 ORTHO05D008708 1.1e-40 170.2 118 63.6
AUR62020968 Chenopodium quinoa HOM05D006876 ORTHO05D008708 1.4e-40 169.9 111 67.6
arahy.Tifrunner.gnm1.ann1.R6YTNA Arachis hypogaea HOM05D006876 ORTHO05D008708 2.3e-40 169.1 111 67.6
Glyma.03G003700 Glycine max HOM05D006876 ORTHO05D008708 2.3e-40 169.1 110 68.2
Sabra06G0019500 Salix brachista HOM05D006876 ORTHO05D008708 2.3e-40 169.1 111 67.6
unitig_899.g15477 Utricularia gibba HOM05D006876 ORTHO05D008708 6.8e-40 167.5 111 64.0
Duzib114G0933 Durio zibethinus HOM05D006876 ORTHO05D008708 1.5e-39 166.4 111 64.9
Gorai.010G139600 Gossypium raimondii HOM05D006876 ORTHO05D008708 2.6e-39 165.6 113 63.7
Gohir.D13G092600 Gossypium hirsutum HOM05D006876 ORTHO05D008708 4.4e-39 164.9 111 64.9
Os01g0810200 Oryza sativa ssp. japonica HOM05D006876 ORTHO05D008708 4.4e-39 164.9 113 67.3
Zm00001eb150270 Zea mays HOM05D006876 ORTHO05D008708 7.6e-39 164.1 113 68.1
Aqoxy1G01501 Aquilegia oxysepala HOM05D006876 ORTHO05D008708 9.9e-39 163.7 104 68.3
Gohir.A13G086570 Gossypium hirsutum HOM05D006876 ORTHO05D008708 9.9e-39 163.7 110 64.5
VMungo1383G0045 Vigna mungo HOM05D006876 ORTHO05D008708 2.2e-38 162.5 112 64.3
QL05p001451 Quercus lobata HOM05D006876 ORTHO05D008708 3.5e-36 155.2 100 68.0
SEGI_40976 Sequoiadendron giganteum HOM05D006876 ORTHO05D008708 1.0e-35 153.7 112 58.9
ATR1096G134 Amborella trichopoda HOM05D006876 ORTHO05D008708 3.0e-35 152.1 113 62.8
Actinidia37859 Actinidia chinensis HOM05D006876 ORTHO05D008708 4.3e-34 148.3 87 75.9
Nn7g37203 Nelumbo nucifera HOM05D006876 ORTHO05D008708 2.9e-30 135.6 81 74.1
QL05p001731 Quercus lobata HOM05D006876 ORTHO05D008708 1.2e-20 103.6 68 66.2
QL05p085390 Quercus lobata HOM05D006876 ORTHO05D008708 1.2e-20 103.6 68 66.2
Ca_08331_v3 Cicer arietinum L. HOM05D006876 ORTHO05D008708 1.3e-17 93.6 66 63.6
CBR_g17867 Chara braunii HOM05D006876 ORTHO05D008708 1.6e-17 93.2 114 37.7
arahy.Tifrunner.gnm1.ann1.QI3NWI Arachis hypogaea HOM05D006876 ORTHO05D008708 1.5e-15 86.7 63 57.1
arahy.Tifrunner.gnm1.ann1.8Z6XIB Arachis hypogaea HOM05D006876 ORTHO05D008708 2.6e-15 85.9 50 68.0
MCO02G060 Micromonas commoda HOM05D006876 ORTHO05D008708 4.5e-15 85.1 109 39.4
FvH4_1g29600 Fragaria vesca HOM05D006876 ORTHO05D008708 2.9e-14 82.4 43 69.8
Lalb_Chr02g0157641 Lupinus albus HOM05D006876 ORTHO05D008708 1.4e-13 80.1 43 74.4
arahy.Tifrunner.gnm1.ann1.S4H51W Arachis hypogaea HOM05D006876 ORTHO05D008708 2.4e-13 79.3 43 69.8
Glyma.10G143650 Glycine max HOM05D006876 ORTHO05D008708 2.7e-12 75.9 43 72.1
Oeu007164.1 Olea europaea HOM05D006876 ORTHO05D008708 5.1e-11 71.6 43 67.4
arahy.Tifrunner.gnm1.ann1.ERVJ4V Arachis hypogaea HOM05D006876 ORTHO05D008708 3.1e-08 62.4 49 53.1
C06p23790 Brassica napus HOM05D006876 ORTHO05D040197 5.3e-08 61.6 72 45.8
BolC6t37548H Brassica oleracea HOM05D006876 ORTHO05D040197 9.0e-08 60.8 72 44.4


User provided reference genes

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