Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A814G51 Lonicera japonica HOM05D007175 ORTHO05D009032 9.3e-220 766.5 378 100.0
Dinv30325 Davidia involucrata HOM05D007175 ORTHO05D009032 2.1e-155 552.7 452 64.8
DCAR_013353 Daucus carota HOM05D007175 ORTHO05D009032 3.4e-153 545.4 333 79.3
Actinidia37900 Actinidia chinensis HOM05D007175 ORTHO05D009032 8.3e-152 540.8 450 61.8
Potri.005G259700 Populus trichocarpa HOM05D007175 ORTHO05D009032 1.9e-151 539.7 395 67.1
Sabra05G0201000 Salix brachista HOM05D007175 ORTHO05D009032 3.9e-149 531.9 331 75.5
GSVIVG01013462001 Vitis vinifera HOM05D007175 ORTHO05D009032 4.3e-148 528.5 432 63.4
Atru.chr13.18 Acer truncatum HOM05D007175 ORTHO05D009032 5.6e-148 528.1 333 76.0
Oeu000737.1 Olea europaea HOM05D007175 ORTHO05D009032 7.3e-148 527.7 337 74.5
Prupe.5G000900 Prunus persica HOM05D007175 ORTHO05D009032 1.8e-146 523.1 452 58.6
Cc10_g00080 Coffea canephora HOM05D007175 ORTHO05D009032 3.1e-146 522.3 333 74.5
FvH4_5g26760 Fragaria vesca HOM05D007175 ORTHO05D009032 5.2e-146 521.5 397 66.0
Gohir.D01G086300 Gossypium hirsutum HOM05D007175 ORTHO05D009032 5.2e-146 521.5 331 75.2
Cfa014168 Carpinus fangiana HOM05D007175 ORTHO05D009032 1.2e-145 520.4 333 74.8
COL.COLO4_12263 Corchorus olitorius HOM05D007175 ORTHO05D009032 1.5e-145 520.0 331 74.0
Thecc.08G097400 Theobroma cacao HOM05D007175 ORTHO05D009032 3.4e-145 518.8 331 74.0
Gorai.002G111700 Gossypium raimondii HOM05D007175 ORTHO05D009032 1.7e-144 516.5 331 74.6
CiPaw.07G130000 Carya illinoinensis HOM05D007175 ORTHO05D009032 2.9e-144 515.8 334 74.9
Duzib116G0712 Durio zibethinus HOM05D007175 ORTHO05D009032 1.1e-143 513.8 331 74.3
QL02p016318 Quercus lobata HOM05D007175 ORTHO05D009032 3.5e-142 508.8 332 74.4
TAR376G0324 Trochodendron aralioides HOM05D007175 ORTHO05D009032 7.8e-142 507.7 334 74.6
Haze_22891 Corylus avellana HOM05D007175 ORTHO05D009032 2.3e-141 506.1 333 73.6
Manes.18G000500 Manihot esculenta HOM05D007175 ORTHO05D009032 2.3e-141 506.1 338 71.6
ClCG11G019270 Citrullus lanatus HOM05D007175 ORTHO05D009032 3.3e-140 502.3 333 72.4
RcHm_v2.0_Chr7g0217631 Rosa chinensis HOM05D007175 ORTHO05D009032 7.3e-140 501.1 333 71.2
FAN13G2687 Fragaria x ananassa HOM05D007175 ORTHO05D009032 2.1e-139 499.6 450 57.6
Nn5g31081 Nelumbo nucifera HOM05D007175 ORTHO05D009032 2.8e-139 499.2 332 72.9
Eucgr.F03631 Eucalyptus grandis HOM05D007175 ORTHO05D009032 3.6e-139 498.8 448 56.9
Cpa.g.sc36.96 Carica papaya HOM05D007175 ORTHO05D009032 4.7e-139 498.4 302 78.5
Sed0015844 Sechium edule HOM05D007175 ORTHO05D009032 6.2e-139 498.0 331 73.4
CsaV3_4G037860 Cucumis sativus L. HOM05D007175 ORTHO05D009032 4.0e-138 495.4 333 71.8
Rhsim07G0258300 Rhododendron simsii HOM05D007175 ORTHO05D009032 8.9e-138 494.2 415 61.2
BcaNung05249 Brassica carinata HOM05D007175 ORTHO05D009032 3.4e-137 492.3 417 58.8
HanXRQChr14g0427501 Helianthus annuus HOM05D007175 ORTHO05D009032 9.9e-137 490.7 433 58.9
THA.LOC104806865 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 6.4e-136 488.0 454 54.6
CAN.G1330.33 Capsicum annuum HOM05D007175 ORTHO05D009032 8.4e-136 487.6 333 71.5
PSO782G3151 Papaver somniferum HOM05D007175 ORTHO05D009032 1.4e-135 486.9 332 69.9
FAN08G3457 Fragaria x ananassa HOM05D007175 ORTHO05D009032 5.4e-135 485.0 425 59.1
PSO063G3513 Papaver somniferum HOM05D007175 ORTHO05D009032 9.2e-135 484.2 332 69.9
VMungo0647G1837 Vigna mungo HOM05D007175 ORTHO05D009032 1.6e-134 483.4 452 57.1
BcaB07g31081 Brassica carinata HOM05D007175 ORTHO05D009032 4.6e-134 481.9 444 55.2
Glyma.14G047400 Glycine max HOM05D007175 ORTHO05D009032 6.0e-134 481.5 458 55.9
ECA238G4354 Erigeron canadensis HOM05D007175 ORTHO05D009032 1.0e-133 480.7 333 70.6
AL8G19150 Arabidopsis lyrata HOM05D007175 ORTHO05D009032 2.3e-133 479.6 431 55.7
Glyma.02G269500 Glycine max HOM05D007175 ORTHO05D009032 3.9e-133 478.8 449 57.0
FAN04G1040 Fragaria x ananassa HOM05D007175 ORTHO05D009032 6.6e-133 478.0 308 73.4
Lalb_Chr17g0347321 Lupinus albus HOM05D007175 ORTHO05D009032 1.5e-132 476.9 318 71.1
BcaC04g21999 Brassica carinata HOM05D007175 ORTHO05D009032 1.9e-132 476.5 445 54.6
C09p25000 Brassica napus HOM05D007175 ORTHO05D009032 1.9e-132 476.5 445 54.6
MELO3C017080.2 Cucumis melo HOM05D007175 ORTHO05D009032 2.5e-132 476.1 362 65.5
Thhalv10003204m.g Eutrema salsugineum HOM05D007175 ORTHO05D009032 3.3e-132 475.7 449 53.2
Phvul.008G212600 Phaseolus vulgaris HOM05D007175 ORTHO05D009032 5.6e-132 474.9 331 69.8
A09p19640 Brassica napus HOM05D007175 ORTHO05D009032 7.3e-132 474.6 446 54.9
THA.LOC104801648 Tarenaya hassleriana HOM05D007175 ORTHO05D009032 1.2e-131 473.8 363 62.3
Lsat_1_v5_gn_2_2721 Lactuca sativa HOM05D007175 ORTHO05D009032 2.8e-131 472.6 423 58.6
Sp7g08160 Schrenkiella parvula HOM05D007175 ORTHO05D009032 2.8e-131 472.6 334 66.8
CARHR285020 Cardamine hirsuta HOM05D007175 ORTHO05D009032 3.6e-131 472.2 338 65.4
BolC9t55392H Brassica oleracea HOM05D007175 ORTHO05D009032 4.7e-131 471.9 445 54.4
Carub.0008s0679 Capsella rubella HOM05D007175 ORTHO05D009032 6.2e-131 471.5 334 65.9
TPR.G14442 Trifolium pratense HOM05D007175 ORTHO05D009032 6.2e-131 471.5 334 67.7
Aqoxy5G03363 Aquilegia oxysepala HOM05D007175 ORTHO05D009032 8.1e-131 471.1 308 73.4
Lalb_Chr10g0105651 Lupinus albus HOM05D007175 ORTHO05D009032 2.4e-130 469.5 317 70.3
LjContig00564g0015126 Lotus japonicus HOM05D007175 ORTHO05D009032 6.9e-130 468.0 450 53.8
ATR0605G370 Amborella trichopoda HOM05D007175 ORTHO05D009032 1.2e-129 467.2 437 55.8
Ca_06102_v3 Cicer arietinum L. HOM05D007175 ORTHO05D009032 3.4e-129 465.7 334 66.5
Ah.14g086450 Amaranthus hybridus HOM05D007175 ORTHO05D009032 1.9e-127 459.9 334 66.8
Medtr5g085780 Medicago truncatula HOM05D007175 ORTHO05D009032 1.9e-127 459.9 332 67.8
Psat2g024960 Pisum sativum HOM05D007175 ORTHO05D009032 2.4e-127 459.5 316 68.4
Aa31LG9G12520 Aethionema arabicum HOM05D007175 ORTHO05D009032 3.2e-127 459.1 458 51.5
AUR62042532 Chenopodium quinoa HOM05D007175 ORTHO05D009032 4.2e-127 458.8 344 64.5
EL10Ac1g01857 Beta vulgaris HOM05D007175 ORTHO05D009032 2.7e-126 456.1 363 62.8
CSS0003113 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.7e-125 453.4 335 68.1
Os02g0592200 Oryza sativa ssp. japonica HOM05D007175 ORTHO05D009032 1.1e-122 444.1 315 67.9
Ciclev10003552m.g Citrus clementina HOM05D007175 ORTHO05D009032 1.8e-122 443.4 465 53.3
CSS0024225 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.0e-122 442.2 306 70.6
AUR62035193 Chenopodium quinoa HOM05D007175 ORTHO05D009032 9.0e-122 441.0 316 66.8
TWI36G1138 Tripterygium wilfordii HOM05D007175 ORTHO05D009032 3.4e-121 439.1 384 58.6
CSS0000573 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.5e-121 438.7 318 69.2
AT5G42370 Arabidopsis thaliana HOM05D007175 ORTHO05D009032 5.8e-121 438.3 455 50.8
arahy.Tifrunner.gnm1.ann1.YTK8KP Arachis hypogaea HOM05D007175 ORTHO05D009032 1.7e-120 436.8 439 51.5
BraA09t37575Z Brassica rapa HOM05D007175 ORTHO05D009032 8.4e-120 434.5 456 51.8
arahy.Tifrunner.gnm1.ann1.BW2M8B Arachis hypogaea HOM05D000005 ORTHO05D009032 3.2e-119 432.6 439 51.0
Gohir.A01G101333 Gossypium hirsutum HOM05D007175 ORTHO05D009032 1.5e-116 423.7 331 63.7
FAN18G0319 Fragaria x ananassa HOM05D007175 ORTHO05D009032 1.4e-114 417.2 450 51.3
CSS0005819 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.3e-112 410.6 335 63.6
CANSAT25G0321 Cannabis sativa HOM05D007175 ORTHO05D009032 6.4e-112 408.3 339 61.7
HPP92_018876 Vanilla planifolia HOM05D007175 ORTHO05D009032 6.2e-107 391.7 298 62.8
AagrBONN_evm.TU.Sc2ySwM_117.3655 Anthoceros agrestis HOM05D007175 ORTHO05D009032 4.0e-106 389.0 305 59.0
Mapoly0013s0050 Marchantia polymorpha HOM05D007175 ORTHO05D009032 2.5e-103 379.8 351 54.1
SMO259G0040 Selaginella moellendorffii HOM05D007175 ORTHO05D009032 4.3e-100 369.0 333 54.4
Pp3c5_8650 Physcomitrium patens HOM05D007175 ORTHO05D009032 1.2e-97 360.9 440 44.1
Zm00001eb245810 Zea mays HOM05D007175 ORTHO05D009032 4.2e-95 352.4 251 66.1
Hma1.2p1_0810F.1_g221930 Hydrangea macrophylla HOM05D007175 ORTHO05D009032 1.7e-83 313.9 198 75.3
CBR_g4433 Chara braunii HOM05D007175 ORTHO05D009032 3.9e-77 292.7 332 45.2
HPP92_018864 Vanilla planifolia HOM05D007175 ORTHO05D009032 8.8e-61 238.4 134 82.1
Peaxi162Scf00385g01229 Petunia axillaris HOM05D007175 ORTHO05D009032 2.1e-54 217.2 164 64.0
CSS0005025 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-50 204.1 108 87.0
CSS0026468 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 1.8e-50 204.1 108 87.0
PSO063G1612 Papaver somniferum HOM05D007175 ORTHO05D009032 2.1e-46 190.7 123 74.8
PRCOL_00006786 Prasinoderma coloniale HOM05D007175 ORTHO05D009032 2.6e-44 183.7 293 37.5
LjContig00564g0013673 Lotus japonicus HOM05D007175 ORTHO05D009032 2.4e-42 177.2 218 47.7
Sopen04g036620 Solanum pennellii HOM05D007175 ORTHO05D009032 1.7e-40 171.0 133 63.9
CSS0020086 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.7e-38 162.9 169 53.3
CSS0028611 Camellia sinensis var. sinensis HOM05D007175 ORTHO05D009032 4.7e-38 162.9 169 53.3
Peaxi162Scf00385g01230 Petunia axillaris HOM05D007175 ORTHO05D009032 4.0e-37 159.8 145 58.6
Dinv30323 Davidia involucrata HOM05D000225 ORTHO05D001817 1.7e-32 144.4 117 65.0
MCO15G710 Micromonas commoda HOM05D007175 ORTHO05D009032 5.6e-31 139.4 267 36.0
Dinv30324 Davidia involucrata HOM05D007175 ORTHO05D009032 1.2e-30 138.3 70 91.4
PGSC0003DMG400025665 Solanum tuberosum HOM05D007175 ORTHO05D009032 2.5e-23 114.0 76 69.7
SEGI_21773 Sequoiadendron giganteum HOM05D007175 ORTHO05D009032 3.1e-21 107.1 63 73.0
Lsat_1_v5_gn_8_80261 Lactuca sativa HOM05D007175 ORTHO05D009032 2.0e-12 77.8 41 82.9
Pp3c27_7660 Physcomitrium patens HOM05D019562 ORTHO05D021280 6.4e-11 72.8 402 23.6
Mapoly0091s0011 Marchantia polymorpha HOM05D019562 ORTHO05D021280 1.9e-10 71.2 78 43.6
Cre07.g321350 Chlamydomonas reinhardtii HOM05D019562 ORTHO05D021280 2.7e-09 67.4 78 43.6
CBR_g24078 Chara braunii HOM05D019562 ORTHO05D021280 1.7e-08 64.7 109 34.9
AagrBONN_evm.TU.Sc2ySwM_117.1015 Anthoceros agrestis HOM05D019562 ORTHO05D021280 1.9e-07 61.2 78 38.5
Mapoly0022s0145 Marchantia polymorpha HOM05D019562 ORTHO05D021280 6.2e-06 56.2 77 36.4


User provided reference genes

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