Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj3P797T41 Lonicera japonica HOM05D006984 ORTHO05D008773 6.1e-91 337.4 166 100.0
Lj4A811G120 Lonicera japonica HOM05D006984 ORTHO05D008773 6.1e-91 337.4 166 100.0
Dinv13757 Davidia involucrata HOM05D006984 ORTHO05D008773 2.8e-75 285.4 162 84.0
Cc10_g00260 Coffea canephora HOM05D006984 ORTHO05D008773 3.6e-75 285.0 159 85.5
HanXRQChr09g0241901 Helianthus annuus HOM05D006984 ORTHO05D008773 1.5e-73 279.6 163 79.8
Peaxi162Scf00064g01321 Petunia axillaris HOM05D006984 ORTHO05D008773 9.8e-73 276.9 161 80.7
Lsat_1_v5_gn_9_48361 Lactuca sativa HOM05D006984 ORTHO05D008773 1.7e-72 276.2 163 78.5
QL02p015743 Quercus lobata HOM05D006984 ORTHO05D008773 4.9e-72 274.6 161 77.0
GSVIVG01013427001 Vitis vinifera HOM05D006984 ORTHO05D008773 1.4e-71 273.1 162 78.4
CAN.G208.41 Capsicum annuum HOM05D006984 ORTHO05D008773 2.4e-71 272.3 163 77.3
Sabra05G0198700 Salix brachista HOM05D006984 ORTHO05D008773 2.4e-71 272.3 162 77.8
AUR62024096 Chenopodium quinoa HOM05D006984 ORTHO05D008773 3.2e-71 271.9 160 76.2
ECA232G4329 Erigeron canadensis HOM05D006984 ORTHO05D008773 3.2e-71 271.9 161 77.0
Glyma.04G014500 Glycine max HOM05D006984 ORTHO05D008773 4.1e-71 271.6 164 77.4
VMungo1309G1928 Vigna mungo HOM05D006984 ORTHO05D008773 4.1e-71 271.6 162 77.2
Cpa.g.sc26.14 Carica papaya HOM05D006984 ORTHO05D008773 5.4e-71 271.2 159 79.2
Solyc12g094720.3 Solanum lycopersicum HOM05D006984 ORTHO05D008773 5.4e-71 271.2 163 79.1
Sopen12g031620 Solanum pennellii HOM05D006984 ORTHO05D008773 5.4e-71 271.2 163 79.1
CSS0020436 Camellia sinensis var. sinensis HOM05D006984 ORTHO05D008773 7.0e-71 270.8 160 78.8
TAR628G1538 Trochodendron aralioides HOM05D006984 ORTHO05D008773 7.0e-71 270.8 163 77.3
Glyma.06G014500 Glycine max HOM05D006984 ORTHO05D008773 9.2e-71 270.4 164 76.2
EL10Ac1g01871 Beta vulgaris HOM05D006984 ORTHO05D008773 1.6e-70 269.6 167 75.4
Oeu035863.2 Olea europaea HOM05D006984 ORTHO05D008773 2.1e-70 269.2 163 76.7
Potri.005G256600 Populus trichocarpa HOM05D006984 ORTHO05D008773 2.1e-70 269.2 162 78.4
Sc15g0004070 Simmondsia chinensis HOM05D006984 ORTHO05D008773 2.1e-70 269.2 160 76.9
AUR62035170 Chenopodium quinoa HOM05D006984 ORTHO05D008773 2.7e-70 268.9 160 75.0
Lj1g0018204 Lotus japonicus HOM05D006984 ORTHO05D008773 2.7e-70 268.9 162 75.3
PGSC0003DMG400029399 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.5e-70 268.5 163 77.9
Phvul.009G008400 Phaseolus vulgaris HOM05D006984 ORTHO05D008773 4.6e-70 268.1 162 76.5
TWI56G0056 Tripterygium wilfordii HOM05D006984 ORTHO05D008773 4.6e-70 268.1 164 75.0
Nn6g31626 Nelumbo nucifera HOM05D006984 ORTHO05D008773 7.8e-70 267.3 160 76.9
Manes.05G127800 Manihot esculenta HOM05D006984 ORTHO05D008773 1.7e-69 266.2 166 76.5
Actinidia17077 Actinidia chinensis HOM05D006984 ORTHO05D008773 3.9e-69 265.0 156 78.2
Duzib116G0393 Durio zibethinus HOM05D006984 ORTHO05D008773 3.9e-69 265.0 162 75.9
vmacro21767 Vaccinium macrocarpon HOM05D006984 ORTHO05D008773 5.1e-69 264.6 162 75.9
MSTRG.24516 Avicennia marina HOM05D006984 ORTHO05D008773 1.1e-68 263.5 161 75.8
Migut.N02987 Erythranthe guttata HOM05D006984 ORTHO05D008773 2.5e-68 262.3 161 76.4
Atru.chr13.60 Acer truncatum HOM05D006984 ORTHO05D008773 3.3e-68 261.9 162 74.1
Thecc.08G099800 Theobroma cacao HOM05D006984 ORTHO05D008773 5.6e-68 261.2 157 76.4
Cfa014138 Carpinus fangiana HOM05D006984 ORTHO05D008773 3.6e-67 258.5 157 78.3
MD16G1283100 Malus domestica HOM05D006984 ORTHO05D008773 3.6e-67 258.5 162 74.1
CiPaw.07G133500 Carya illinoinensis HOM05D006984 ORTHO05D008773 6.2e-67 257.7 156 75.6
SGA_v2.0_scaffold220G42646 Striga asiatica HOM05D006984 ORTHO05D008773 1.1e-66 256.9 154 76.6
Ca_15385_v3 Cicer arietinum L. HOM05D006984 ORTHO05D008773 1.4e-66 256.5 162 71.6
Ciclev10001894m.g Citrus clementina HOM05D006984 ORTHO05D008773 1.8e-66 256.1 155 73.5
Psat5g008560 Pisum sativum HOM05D006984 ORTHO05D008773 1.8e-66 256.1 164 70.7
RcHm_v2.0_Chr7g0216691 Rosa chinensis HOM05D006984 ORTHO05D008773 1.8e-66 256.1 160 75.6
Nitab4.5_0000407g0010 Nicotiana tabacum HOM05D006984 ORTHO05D008773 2.3e-66 255.8 158 74.7
Hund01834 Selenicereus undatus HOM05D006984 ORTHO05D008773 2.3e-66 255.8 162 72.8
TPR.G38185 Trifolium pratense HOM05D006984 ORTHO05D008773 2.3e-66 255.8 164 68.9
FAN18G2056 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.1e-66 255.4 159 76.1
MBI04_g31208_MAGBIO Magnolia biondii HOM05D006984 ORTHO05D008773 3.1e-66 255.4 161 74.5
THA.LOC104813736 Tarenaya hassleriana HOM05D006984 ORTHO05D008773 8.9e-66 253.8 163 71.8
Aa31LG4G6540 Aethionema arabicum HOM05D006984 ORTHO05D008773 1.5e-65 253.1 160 71.2
FvH4_5g26100 Fragaria vesca HOM05D006984 ORTHO05D008773 1.5e-65 253.1 160 75.0
Medtr3g116110 Medicago truncatula HOM05D006984 ORTHO05D008773 1.5e-65 253.1 162 69.8
AT1G76450 Arabidopsis thaliana HOM05D006984 ORTHO05D008773 2.0e-65 252.7 160 72.5
CsaV3_6G035930 Cucumis sativus L. HOM05D006984 ORTHO05D008773 2.6e-65 252.3 161 68.9
AL2G36590 Arabidopsis lyrata HOM05D006984 ORTHO05D008773 3.4e-65 251.9 160 71.9
Sp5g31620 Schrenkiella parvula HOM05D006984 ORTHO05D008773 3.4e-65 251.9 160 71.9
CANSAT25G0748 Cannabis sativa HOM05D006984 ORTHO05D008773 4.4e-65 251.5 162 71.6
Eucgr.F01822 Eucalyptus grandis HOM05D006984 ORTHO05D008773 4.4e-65 251.5 162 71.0
Hma1.2p1_0489F.1_g164090 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 5.8e-65 251.1 143 80.4
arahy.Tifrunner.gnm1.ann1.H7AW2T Arachis hypogaea HOM05D006984 ORTHO05D008773 7.5e-65 250.8 172 68.6
MELO3C026518.2 Cucumis melo HOM05D006984 ORTHO05D008773 7.5e-65 250.8 161 69.6
CARHR070010 Cardamine hirsuta HOM05D006984 ORTHO05D008773 9.9e-65 250.4 160 72.5
arahy.Tifrunner.gnm1.ann1.QT2TB5 Arachis hypogaea HOM05D006984 ORTHO05D008773 2.2e-64 249.2 173 67.6
Lalb_Chr23g0265511 Lupinus albus HOM05D006984 ORTHO05D008773 2.2e-64 249.2 164 72.0
Carub.0002s2337 Capsella rubella HOM05D006984 ORTHO05D008773 1.4e-63 246.5 163 69.9
Gohir.A01G188600 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.9e-63 246.1 162 71.6
Gohir.D01G180900 Gossypium hirsutum HOM05D006984 ORTHO05D008773 1.9e-63 246.1 162 71.6
Gorai.002G221600 Gossypium raimondii HOM05D006984 ORTHO05D008773 1.9e-63 246.1 162 71.6
Haze_22863 Corylus avellana HOM05D006984 ORTHO05D008773 2.4e-63 245.7 173 69.4
BcaC08g47243 Brassica carinata HOM05D006984 ORTHO05D008773 4.1e-63 245.0 161 69.6
unitig_22.g5726 Utricularia gibba HOM05D006984 ORTHO05D008773 7.1e-63 244.2 162 72.2
Sed0024892 Sechium edule HOM05D006984 ORTHO05D008773 1.2e-62 243.4 156 68.6
BraA07t31741Z Brassica rapa HOM05D006984 ORTHO05D008773 2.7e-62 242.3 161 68.9
CDE05G0055 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 3.5e-62 241.9 160 68.1
BolC6t40095H Brassica oleracea HOM05D006984 ORTHO05D008773 6.0e-62 241.1 161 68.3
BcaC08g47152 Brassica carinata HOM05D006984 ORTHO05D008773 2.3e-61 239.2 162 68.5
Prupe.5G005500 Prunus persica HOM05D006984 ORTHO05D008773 6.6e-61 237.7 162 72.2
A07p42120 Brassica napus HOM05D006984 ORTHO05D008773 8.6e-61 237.3 155 69.7
CDE05G2674 Ceratophyllum demersum HOM05D006984 ORTHO05D008773 1.1e-60 236.9 160 66.9
Os08g0512500 Oryza sativa ssp. japonica HOM05D006984 ORTHO05D008773 1.1e-60 236.9 164 65.9
COL.COLO4_12298 Corchorus olitorius HOM05D006984 ORTHO05D008773 1.9e-60 236.1 163 68.1
C06p50690 Brassica napus HOM05D006984 ORTHO05D008773 9.6e-60 233.8 155 68.4
PSO541G1597 Papaver somniferum HOM05D006984 ORTHO05D008773 1.2e-59 233.4 162 64.8
ATR0001G027 Amborella trichopoda HOM05D006984 ORTHO05D008773 2.8e-59 232.3 150 70.7
FAN13G1472 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.6e-59 231.9 193 61.1
Thhalv10019042m.g Eutrema salsugineum HOM05D006984 ORTHO05D008773 6.2e-59 231.1 160 67.5
PGR083G2821 Punica granatum HOM05D006984 ORTHO05D008773 8.1e-59 230.7 144 76.4
FAN08G1099 Fragaria x ananassa HOM05D006984 ORTHO05D008773 1.2e-57 226.9 154 70.8
Aqoxy6G02992 Aquilegia oxysepala HOM05D006984 ORTHO05D008773 2.0e-57 226.1 160 64.4
FAN04G1410 Fragaria x ananassa HOM05D006984 ORTHO05D008773 3.8e-56 221.9 162 67.9
Hma1.2p1_0489F.1_g164100 Hydrangea macrophylla HOM05D006984 ORTHO05D008773 1.2e-54 216.9 120 84.2
Rhsim06G0003200 Rhododendron simsii HOM05D006984 ORTHO05D008773 1.6e-54 216.5 266 46.6
ClCG08G009180 Citrullus lanatus HOM05D006984 ORTHO05D008773 6.0e-54 214.5 161 62.1
Nitab4.5_0003423g0020 Nicotiana tabacum HOM05D006984 ORTHO05D008773 5.8e-49 198.0 158 63.9
Mapoly0008s0218 Marchantia polymorpha HOM05D006984 ORTHO05D008773 7.6e-49 197.6 160 54.4
Pp3c4_15070 Physcomitrium patens HOM05D006984 ORTHO05D008773 7.8e-46 187.6 160 53.1
Ah.11g041950 Amaranthus hybridus HOM05D006984 ORTHO05D008773 5.3e-42 174.9 134 65.7
AagrBONN_evm.TU.Sc2ySwM_117.1863 Anthoceros agrestis HOM05D006984 ORTHO05D008773 2.2e-40 169.5 136 53.7
SMO245G0004 Selaginella moellendorffii HOM05D006984 ORTHO05D008773 4.3e-36 155.2 161 42.2
Zm00001eb035340 Zea mays HOM05D006984 ORTHO05D008773 4.8e-35 151.8 101 69.3
CBR_g51937 Chara braunii HOM05D006984 ORTHO05D008773 1.1e-31 140.6 159 42.8
PGSC0003DMG400021762 Solanum tuberosum HOM05D006984 ORTHO05D008773 3.7e-27 125.6 87 71.3
PGSC0003DMG400008742 Solanum tuberosum HOM05D006984 ORTHO05D008773 1.5e-25 120.2 77 74.0
Medtr6g034285 Medicago truncatula HOM05D000394 ORTHO05D008773 1.0e-21 107.5 66 69.7
PRCOL_00004638 Prasinoderma coloniale HOM05D006984 ORTHO05D008773 1.3e-21 107.1 165 35.8
Sopen12g026780 Solanum pennellii HOM05D000004 ORTHO05D000002 5.1e-21 105.1 114 51.8
Cre10.g446350 Chlamydomonas reinhardtii HOM05D006984 ORTHO05D008773 1.1e-20 104.0 177 35.6
MCO13G452 Micromonas commoda HOM05D006984 ORTHO05D008773 1.3e-19 100.5 162 34.0
Psat7g136640 Pisum sativum HOM05D006984 ORTHO05D008773 2.0e-12 76.6 106 41.5
HPP92_015474 Vanilla planifolia HOM05D006984 ORTHO05D008773 3.4e-09 65.9 50 58.0
Psat6g152440 Pisum sativum HOM05D006984 ORTHO05D000789 1.1e-07 60.8 38 68.4
Psat6g152480 Pisum sativum HOM05D006984 ORTHO05D008773 5.5e-07 58.5 32 75.0


User provided reference genes

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