Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A804T73 Lonicera japonica HOM05D003764 ORTHO05D004356 1.5e-236 822.4 409 100.0
Dinv31931 Davidia involucrata HOM05D003764 ORTHO05D004356 6.2e-169 597.8 444 69.1
GSVIVG01008681001 Vitis vinifera HOM05D003764 ORTHO05D004356 2.9e-158 562.4 432 66.4
Oeu035836.1 Olea europaea HOM05D003764 ORTHO05D004356 1.9e-157 559.7 437 64.5
Nitab4.5_0003544g0010 Nicotiana tabacum HOM05D003764 ORTHO05D004356 3.5e-156 555.4 415 67.2
Nn6g31748 Nelumbo nucifera HOM05D003764 ORTHO05D004356 4.6e-156 555.1 412 67.7
vmacro21825 Vaccinium macrocarpon HOM05D003764 ORTHO05D004356 4.6e-156 555.1 417 67.9
Actinidia15487 Actinidia chinensis HOM05D003764 ORTHO05D004356 7.9e-156 554.3 405 69.9
Peaxi162Scf00064g01131 Petunia axillaris HOM05D003764 ORTHO05D004356 1.0e-155 553.9 424 65.8
Nitab4.5_0000699g0100 Nicotiana tabacum HOM05D003764 ORTHO05D004356 1.3e-155 553.5 393 69.2
Actinidia17035 Actinidia chinensis HOM05D003764 ORTHO05D004356 1.8e-155 553.1 439 66.3
Haze_22757 Corylus avellana HOM05D003764 ORTHO05D004356 2.3e-155 552.7 443 65.0
FAN27G3424 Fragaria x ananassa HOM05D003764 ORTHO05D004356 1.5e-154 550.1 424 65.1
Nn5g30922 Nelumbo nucifera HOM05D003764 ORTHO05D004356 2.5e-154 549.3 425 67.5
RcHm_v2.0_Chr6g0304171 Rosa chinensis HOM05D003764 ORTHO05D004356 2.5e-154 549.3 424 65.1
Manes.05G135000 Manihot esculenta HOM05D003764 ORTHO05D004356 7.4e-154 547.7 414 64.7
FAN15G2102 Fragaria x ananassa HOM05D003764 ORTHO05D004356 2.1e-153 546.2 424 64.4
Rhsim06G0008200 Rhododendron simsii HOM05D003764 ORTHO05D004356 2.1e-153 546.2 411 67.4
CANSAT25G3149 Cannabis sativa HOM05D003764 ORTHO05D004356 2.8e-153 545.8 422 65.4
CiPaw.07G139600 Carya illinoinensis HOM05D003764 ORTHO05D004356 3.7e-153 545.4 423 65.7
Oeu021826.1 Olea europaea HOM05D003764 ORTHO05D004356 6.2e-153 544.7 434 62.4
Manes.18G006000 Manihot esculenta HOM05D003764 ORTHO05D004356 1.1e-152 543.9 413 64.9
Ciclev10001182m.g Citrus clementina HOM05D003764 ORTHO05D004356 2.0e-151 539.7 437 63.2
PGSC0003DMG400029320 Solanum tuberosum HOM05D003764 ORTHO05D004356 2.0e-151 539.7 433 63.7
MD08G1003100 Malus domestica HOM05D003764 ORTHO05D004356 2.6e-151 539.3 423 65.5
FvH4_2g37560 Fragaria vesca HOM05D003764 ORTHO05D004356 3.4e-151 538.9 424 63.7
Solyc12g094550.2 Solanum lycopersicum HOM05D003764 ORTHO05D004356 3.4e-151 538.9 434 63.1
TWI56G0154 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 7.6e-151 537.7 413 63.2
TAR628G1614 Trochodendron aralioides HOM05D003764 ORTHO05D004356 6.4e-150 534.6 347 72.9
Sopen12g031450 Solanum pennellii HOM05D003764 ORTHO05D004356 8.4e-150 534.3 435 62.5
Eucgr.F01754 Eucalyptus grandis HOM05D003764 ORTHO05D004356 2.5e-149 532.7 409 65.0
CANSAT80G1902 Cannabis sativa HOM05D003764 ORTHO05D004356 9.3e-149 530.8 441 61.5
PSO210G7283 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-147 527.3 430 62.1
VMungo1309G0568 Vigna mungo HOM05D003764 ORTHO05D004356 1.0e-147 527.3 417 63.5
Peaxi162Scf00104g00322 Petunia axillaris HOM05D003764 ORTHO05D004356 1.3e-147 526.9 397 66.5
Potri.005G249600 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.3e-147 526.9 421 62.9
Migut.C00949 Erythranthe guttata HOM05D003764 ORTHO05D004356 2.3e-147 526.2 373 67.6
CSS0020809 Camellia sinensis var. sinensis HOM05D003764 ORTHO05D004356 6.7e-147 524.6 354 72.3
SGA_v2.0_scaffold108G30854 Striga asiatica HOM05D003764 ORTHO05D004356 1.1e-146 523.9 371 67.9
Cc10_g00740 Coffea canephora HOM05D003764 ORTHO05D004356 1.5e-146 523.5 406 67.2
Potri.002G011400 Populus trichocarpa HOM05D003764 ORTHO05D004356 1.5e-146 523.5 429 62.5
QL02p013934 Quercus lobata HOM05D003764 ORTHO05D004356 1.9e-146 523.1 425 62.6
SGA_v2.0_scaffold108G30849 Striga asiatica HOM05D003764 ORTHO05D004356 2.5e-146 522.7 370 67.3
Lj1g0016047 Lotus japonicus HOM05D003764 ORTHO05D004356 3.3e-146 522.3 402 63.2
PSO170G5992 Papaver somniferum HOM05D003764 ORTHO05D004356 7.4e-146 521.2 439 60.8
Prupe.1G355100 Prunus persica HOM05D003764 ORTHO05D004356 7.4e-146 521.2 423 62.4
TPR.G38113 Trifolium pratense HOM05D003764 ORTHO05D004356 7.4e-146 521.2 402 62.4
Glyma.04G018600 Glycine max HOM05D003764 ORTHO05D004356 9.6e-146 520.8 423 60.8
Ca_15440_v3 Cicer arietinum L. HOM05D003764 ORTHO05D004356 1.3e-145 520.4 414 62.1
Duzib116G0421 Durio zibethinus HOM05D003764 ORTHO05D004356 2.1e-145 519.6 414 62.8
BcaC08g47274 Brassica carinata HOM05D003764 ORTHO05D004356 2.8e-145 519.2 420 63.3
C06p50220 Brassica napus HOM05D003764 ORTHO05D004356 2.8e-145 519.2 420 63.3
BolC6t40061H Brassica oleracea HOM05D003764 ORTHO05D004356 2.8e-145 519.2 420 63.3
Migut.C00953 Erythranthe guttata HOM05D003764 ORTHO05D004356 4.8e-145 518.5 427 61.8
Sabra05G0193100 Salix brachista HOM05D003764 ORTHO05D004356 4.8e-145 518.5 414 63.8
Thecc.08G057700 Theobroma cacao HOM05D003764 ORTHO05D004356 4.8e-145 518.5 408 63.2
Sp5g31390 Schrenkiella parvula HOM05D003764 ORTHO05D004356 6.2e-145 518.1 423 61.7
Sabra02G0008800 Salix brachista HOM05D003764 ORTHO05D004356 8.2e-145 517.7 421 63.2
Phvul.009G021800 Phaseolus vulgaris HOM05D003764 ORTHO05D004356 2.4e-144 516.2 417 61.6
Nitab4.5_0000588g0130 Nicotiana tabacum HOM05D003764 ORTHO05D004356 5.3e-144 515.0 441 61.0
arahy.Tifrunner.gnm1.ann1.I18LAP Arachis hypogaea HOM05D003764 ORTHO05D004356 9.0e-144 514.2 428 61.0
BraA07t31712Z Brassica rapa HOM05D003764 ORTHO05D004356 9.0e-144 514.2 420 62.9
AT1G76250 Arabidopsis thaliana HOM05D003764 ORTHO05D004356 2.6e-143 512.7 414 61.8
Medtr3g115180 Medicago truncatula HOM05D003764 ORTHO05D004356 3.4e-143 512.3 412 60.4
arahy.Tifrunner.gnm1.ann1.CSAI9D Arachis hypogaea HOM05D003764 ORTHO05D004356 4.5e-143 511.9 428 60.5
A07p41820 Brassica napus HOM05D003764 ORTHO05D004356 7.6e-143 511.1 420 62.4
Glyma.06G018900 Glycine max HOM05D003764 ORTHO05D004356 7.6e-143 511.1 423 60.3
Lsat_1_v5_gn_2_6240 Lactuca sativa HOM05D003764 ORTHO05D004356 1.3e-142 510.4 422 62.6
ClCG11G018640 Citrullus lanatus HOM05D003764 ORTHO05D004356 6.5e-142 508.1 418 61.0
PGSC0003DMG400009974 Solanum tuberosum HOM05D003764 ORTHO05D004356 8.4e-142 507.7 424 60.6
PGR031G0670 Punica granatum HOM05D003764 ORTHO05D004356 1.1e-141 507.3 428 61.2
Aa31LG4G6340 Aethionema arabicum HOM05D003764 ORTHO05D004356 1.4e-141 506.9 415 60.7
MSTRG.25298 Avicennia marina HOM05D003764 ORTHO05D004356 1.4e-141 506.9 407 62.9
AUR62043557 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.5e-141 506.1 399 63.7
Aqoxy6G01751 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 3.2e-141 505.8 431 58.5
COL.COLO4_03998 Corchorus olitorius HOM05D003764 ORTHO05D004356 3.2e-141 505.8 419 61.1
HanXRQChr14g0428241 Helianthus annuus HOM05D003764 ORTHO05D004356 5.5e-141 505.0 403 63.5
BraA07t30497Z Brassica rapa HOM05D003764 ORTHO05D004356 1.2e-140 503.8 409 62.3
SGA_v2.0_scaffold275G46585 Striga asiatica HOM05D003764 ORTHO05D004356 1.2e-140 503.8 410 62.7
CARHR069810 Cardamine hirsuta HOM05D003764 ORTHO05D004356 1.6e-140 503.4 397 61.7
BcaC08g47123 Brassica carinata HOM05D003764 ORTHO05D004356 2.1e-140 503.1 420 61.7
Gorai.002G118500 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.1e-140 503.1 404 61.9
Gorai.009G188300 Gossypium raimondii HOM05D003764 ORTHO05D004356 2.1e-140 503.1 345 68.7
SalBow7G4127 Salvia bowleyana HOM05D003764 ORTHO05D004356 2.7e-140 502.7 446 59.0
Carub.0002s2314 Capsella rubella HOM05D003764 ORTHO05D004356 6.1e-140 501.5 406 62.8
Gohir.D01G093100 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.1e-140 501.5 404 61.6
Psat0s5633g0040 Pisum sativum HOM05D003764 ORTHO05D004356 1.0e-139 500.7 414 60.1
Thhalv10018564m.g Eutrema salsugineum HOM05D003764 ORTHO05D004356 1.3e-139 500.4 429 59.0
MSTRG.1112 Avicennia marina HOM05D003764 ORTHO05D004356 1.8e-139 500.0 417 62.4
Solyc04g082280.3 Solanum lycopersicum HOM05D003764 ORTHO05D004356 1.8e-139 500.0 345 68.1
A07p28580 Brassica napus HOM05D003764 ORTHO05D004356 3.0e-139 499.2 405 62.5
Sopen04g035900 Solanum pennellii HOM05D003764 ORTHO05D004356 3.0e-139 499.2 345 67.8
SHI08003 Sapria himalayana HOM05D003764 ORTHO05D004356 5.1e-139 498.4 410 60.5
Gohir.A05G180000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 6.7e-139 498.0 345 68.1
BcaC08g45536 Brassica carinata HOM05D003764 ORTHO05D004356 1.1e-138 497.3 409 61.4
C06p32120 Brassica napus HOM05D003764 ORTHO05D004356 1.1e-138 497.3 409 61.4
BolC6t38338H Brassica oleracea HOM05D003764 ORTHO05D004356 1.1e-138 497.3 409 61.4
MBI08_g19981_MAGBIO Magnolia biondii HOM05D003764 ORTHO05D004356 1.1e-138 497.3 403 62.0
AUR62036887 Chenopodium quinoa HOM05D003764 ORTHO05D004356 2.5e-138 496.1 406 61.8
Lalb_Chr11g0061681 Lupinus albus HOM05D003764 ORTHO05D004356 4.3e-138 495.4 407 60.2
BcaB02g07057 Brassica carinata HOM05D003764 ORTHO05D004356 9.7e-138 494.2 405 61.5
MELO3C017015.2 Cucumis melo HOM05D003764 ORTHO05D004356 8.2e-137 491.1 421 58.2
Sc02g0009060 Simmondsia chinensis HOM05D003764 ORTHO05D004356 1.1e-136 490.7 402 60.2
Ah.00g000380 Amaranthus hybridus HOM05D003764 ORTHO05D004356 3.1e-136 489.2 348 65.8
Hund01762 Selenicereus undatus HOM05D003764 ORTHO05D004356 4.1e-136 488.8 404 61.4
CsaV3_4G037170 Cucumis sativus L. HOM05D003764 ORTHO05D004356 1.5e-135 486.9 408 59.8
Gohir.D05G183000 Gossypium hirsutum HOM05D003764 ORTHO05D004356 2.0e-135 486.5 345 67.2
Gohir.A01G106600 Gossypium hirsutum HOM05D003764 ORTHO05D004356 4.5e-135 485.3 404 60.1
Duzib093G1245 Durio zibethinus HOM05D003764 ORTHO05D004356 5.9e-135 485.0 393 61.6
Sed0020753 Sechium edule HOM05D003764 ORTHO05D004356 1.0e-134 484.2 396 61.9
Peaxi162Scf00064g01016 Petunia axillaris HOM05D003764 ORTHO05D004356 1.7e-134 483.4 343 69.4
Eucgr.F03548 Eucalyptus grandis HOM05D003764 ORTHO05D004356 3.8e-134 482.3 400 60.8
EL10Ac1g01980 Beta vulgaris HOM05D003764 ORTHO05D004356 1.1e-133 480.7 425 58.4
HanXRQChr15g0491851 Helianthus annuus HOM05D003764 ORTHO05D004356 1.1e-133 480.7 414 60.4
Lalb_Chr23g0265831 Lupinus albus HOM05D003764 ORTHO05D004356 2.5e-133 479.6 396 60.6
PSO017G1302 Papaver somniferum HOM05D003764 ORTHO05D004356 1.2e-132 477.2 418 59.8
PSO104G0104 Papaver somniferum HOM05D003764 ORTHO05D004356 6.1e-132 474.9 414 59.2
PSO170G6284 Papaver somniferum HOM05D003764 ORTHO05D004356 6.1e-132 474.9 413 59.8
SGA_v2.0_scaffold275G46588 Striga asiatica HOM05D003764 ORTHO05D004356 7.9e-132 474.6 332 68.1
PSO170G2421 Papaver somniferum HOM05D003764 ORTHO05D004356 2.5e-130 469.5 423 58.2
PSO170G3515 Papaver somniferum HOM05D003764 ORTHO05D004356 9.7e-130 467.6 412 59.5
PSO170G1328 Papaver somniferum HOM05D003764 ORTHO05D004356 1.1e-128 464.2 396 61.4
PSO017G1698 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-128 463.8 398 60.3
PSO017G3919 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-128 463.8 419 58.9
PSO017G3905 Papaver somniferum HOM05D003764 ORTHO05D004356 5.3e-128 461.8 436 56.2
PSO170G4333 Papaver somniferum HOM05D003764 ORTHO05D004356 1.0e-126 457.6 426 56.8
PSO017G1063 Papaver somniferum HOM05D003764 ORTHO05D004356 1.7e-126 456.8 426 56.1
Sabra02G0008700 Salix brachista HOM05D003764 ORTHO05D004356 2.9e-126 456.1 431 57.3
PSO017G4841 Papaver somniferum HOM05D003764 ORTHO05D004356 1.4e-125 453.8 435 56.1
CDE06G1096 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 7.9e-124 448.0 342 61.4
ATR0106G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.9e-123 445.7 413 55.4
unitig_747.g21519 Utricularia gibba HOM05D003764 ORTHO05D004356 5.7e-122 441.8 345 61.2
Cfa014062 Carpinus fangiana HOM05D003764 ORTHO05D004356 8.2e-121 438.0 429 55.7
HPP92_026195 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.5e-119 432.6 340 61.8
THA.LOC104813245 Tarenaya hassleriana HOM05D003764 ORTHO05D004356 5.9e-119 431.8 443 55.5
Cpa.g.sc26.208 Carica papaya HOM05D003764 ORTHO05D004356 3.6e-116 422.5 291 67.7
DCAR_013910 Daucus carota HOM05D003764 ORTHO05D004356 1.7e-113 413.7 435 53.3
HPP92_022192 Vanilla planifolia HOM05D003764 ORTHO05D004356 5.9e-111 405.2 341 57.5
HPP92_022186 Vanilla planifolia HOM05D003764 ORTHO05D004356 3.8e-110 402.5 341 57.5
MD15G1002800 Malus domestica HOM05D003764 ORTHO05D004356 1.2e-106 391.0 250 72.0
HPP92_026182 Vanilla planifolia HOM05D003764 ORTHO05D004356 1.5e-106 390.6 291 64.3
SEGI_06086 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 9.1e-104 381.3 342 54.7
unitig_747.g21882 Utricularia gibba HOM05D003764 ORTHO05D004356 1.7e-102 377.1 442 45.9
SEGI_23487 Sequoiadendron giganteum HOM05D003764 ORTHO05D004356 5.0e-102 375.6 342 53.8
TWI12G0241 Tripterygium wilfordii HOM05D003764 ORTHO05D004356 4.2e-101 372.5 250 68.8
unitig_699.g19216 Utricularia gibba HOM05D003764 ORTHO05D004356 1.6e-100 370.5 346 51.7
CDE07G0072 Ceratophyllum demersum HOM05D003764 ORTHO05D004356 3.6e-100 369.4 307 58.3
unitig_0.g1266 Utricularia gibba HOM05D003764 ORTHO05D004356 1.8e-99 367.1 388 50.0
unitig_699.g19217 Utricularia gibba HOM05D003764 ORTHO05D004356 7.7e-95 351.7 346 50.0
Sabra02G0009000 Salix brachista HOM05D003764 ORTHO05D004356 1.3e-94 350.9 243 66.7
Pp3c14_15070 Physcomitrium patens HOM05D003764 ORTHO05D004356 6.6e-94 348.6 343 50.7
HanXRQChr14g0428221 Helianthus annuus HOM05D003764 ORTHO05D004356 7.5e-90 335.1 236 66.9
A09p51670 Brassica napus HOM05D003764 ORTHO05D004356 4.9e-89 332.4 240 66.2
Atru.chr13.152 Acer truncatum HOM05D003764 ORTHO05D004356 4.1e-88 329.3 307 59.0
Mapoly0049s0068 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.2e-87 327.8 341 48.4
AagrBONN_evm.TU.Sc2ySwM_228.3221 Anthoceros agrestis HOM05D003764 ORTHO05D004356 3.5e-87 326.2 340 48.5
Mapoly0006s0188 Marchantia polymorpha HOM05D003764 ORTHO05D004356 1.3e-86 324.3 339 46.9
SMO141G0079 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 2.3e-86 323.6 348 49.1
Zm00001eb209300 Zea mays HOM05D003764 ORTHO05D004356 3.3e-85 319.7 431 44.3
ECA238G1445 Erigeron canadensis HOM05D003764 ORTHO05D004356 3.4e-82 309.7 236 61.9
SMO364G0266 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.1e-75 288.1 345 40.6
Pp3c17_5840 Physcomitrium patens HOM05D003764 ORTHO05D004356 1.4e-75 287.7 344 43.9
AagrBONN_evm.TU.Sc2ySwM_368.3397 Anthoceros agrestis HOM05D003764 ORTHO05D004356 8.9e-75 285.0 298 47.3
Pp3c17_7390 Physcomitrium patens HOM05D003764 ORTHO05D004356 2.9e-73 280.0 343 43.7
Pp3c1_32600 Physcomitrium patens HOM05D003764 ORTHO05D004356 8.3e-73 278.5 340 42.6
Pp3c2_5370 Physcomitrium patens HOM05D003764 ORTHO05D004356 3.5e-71 273.1 339 40.7
SMO147G0236 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 3.3e-69 266.5 399 39.8
unitig_52.g17754 Utricularia gibba HOM05D003764 ORTHO05D004356 1.2e-68 264.6 240 52.1
SMO367G1018 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 7.8e-63 245.4 343 38.5
CBR_g3019 Chara braunii HOM05D003764 ORTHO05D004356 8.4e-57 225.3 351 37.3
Aqoxy6G01618 Aquilegia oxysepala HOM05D003764 ORTHO05D004356 1.5e-37 161.4 149 55.7
DCAR_010127 Daucus carota HOM05D003764 ORTHO05D004356 2.5e-37 160.6 154 53.2
CBR_g9154 Chara braunii HOM05D003764 ORTHO05D004356 1.0e-22 112.1 318 28.9
Cfa013034 Carpinus fangiana HOM05D003764 ORTHO05D004356 2.3e-22 110.9 85 56.5
ATR0756G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 3.3e-21 107.1 100 47.0
SMO170G0013 Selaginella moellendorffii HOM05D003764 ORTHO05D004356 1.5e-18 98.2 118 44.1
Os02g0119600 Oryza sativa ssp. japonica HOM05D003764 ORTHO05D004356 1.0e-17 95.5 79 51.9
ATR0276G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 7.9e-15 85.9 86 43.0
Potri.012G136700 Populus trichocarpa HOM05D003764 ORTHO05D004356 5.7e-13 79.7 111 49.5
ATR0138G019 Amborella trichopoda HOM05D003764 ORTHO05D004356 1.0e-09 68.9 141 36.9
ATR0555G001 Amborella trichopoda HOM05D003764 ORTHO05D004356 4.2e-08 63.5 68 39.7
Prupe.6G163800 Prunus persica HOM05D003764 ORTHO05D335910 4.2e-08 63.5 47 72.3
Nn1g01454 Nelumbo nucifera HOM05D003764 ORTHO05D004356 6.1e-07 59.7 34 79.4


User provided reference genes

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