Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A795T33 Lonicera japonica HOM05D006698 ORTHO05D008415 0.0e+00 1097.8 538 100.0
CSS0038613 Camellia sinensis var. sinensis HOM05D006698 ORTHO05D008415 3.3e-210 735.3 539 65.5
Rhsim06G0023700 Rhododendron simsii HOM05D006698 ORTHO05D008415 5.8e-207 724.5 540 64.3
GSVIVG01009862001 Vitis vinifera HOM05D006698 ORTHO05D008415 3.0e-203 712.2 539 62.7
Cfa013924 Carpinus fangiana HOM05D006698 ORTHO05D008415 1.2e-199 700.3 540 60.9
Prupe.1G368700 Prunus persica HOM05D006698 ORTHO05D008415 7.6e-199 697.6 540 62.2
ECA238G1455 Erigeron canadensis HOM05D006698 ORTHO05D008415 3.8e-198 695.3 535 63.7
TAR628G0086 Trochodendron aralioides HOM05D006698 ORTHO05D008415 3.8e-198 695.3 541 63.8
Oeu027550.1 Olea europaea HOM05D006698 ORTHO05D008415 1.1e-197 693.7 541 64.0
Haze_22605 Corylus avellana HOM05D006698 ORTHO05D008415 2.7e-196 689.1 567 58.9
vmacro21711 Vaccinium macrocarpon HOM05D006698 ORTHO05D008415 2.7e-196 689.1 562 60.0
DCAR_009935 Daucus carota HOM05D006698 ORTHO05D008415 1.9e-194 682.9 539 61.4
Lsat_1_v5_gn_2_11660 Lactuca sativa HOM05D006698 ORTHO05D008415 2.5e-194 682.6 534 62.4
Thecc.08G041000 Theobroma cacao HOM05D006698 ORTHO05D008415 4.3e-194 681.8 540 61.7
HanXRQChr04g0101141 Helianthus annuus HOM05D006698 ORTHO05D008415 7.3e-194 681.0 538 61.3
Ciclev10000799m.g Citrus clementina HOM05D006698 ORTHO05D008415 2.1e-193 679.5 540 60.7
QL02p011012 Quercus lobata HOM05D006698 ORTHO05D008415 3.6e-193 678.7 542 60.0
Gorai.002G124600 Gossypium raimondii HOM05D006698 ORTHO05D008415 3.1e-192 675.6 540 61.5
Gohir.A01G112500 Gossypium hirsutum HOM05D006698 ORTHO05D008415 5.8e-191 671.4 540 61.1
Gohir.D01G099300 Gossypium hirsutum HOM05D006698 ORTHO05D008415 7.6e-191 671.0 540 61.3
Nn6g32301 Nelumbo nucifera HOM05D006698 ORTHO05D008415 9.9e-191 670.6 539 60.9
CiPaw.09G133200 Carya illinoinensis HOM05D006698 ORTHO05D008415 1.7e-190 669.8 540 59.8
PGSC0003DMG400003770 Solanum tuberosum HOM05D006698 ORTHO05D008415 8.4e-190 667.5 539 62.2
THA.LOC104823101 Tarenaya hassleriana HOM05D006698 ORTHO05D008415 2.7e-188 662.5 539 59.4
CAN.G1271.13 Capsicum annuum HOM05D006698 ORTHO05D008415 3.5e-188 662.1 539 61.8
Sopen04g034840 Solanum pennellii HOM05D006698 ORTHO05D008415 6.0e-188 661.4 539 61.0
Solyc04g081230.3 Solanum lycopersicum HOM05D006698 ORTHO05D008415 1.7e-187 659.8 538 61.0
TWI12G1415 Tripterygium wilfordii HOM05D006698 ORTHO05D008415 5.1e-187 658.3 540 59.4
MSTRG.22331 Avicennia marina HOM05D006698 ORTHO05D008415 2.5e-186 656.0 542 59.6
SGA_v2.0_scaffold47G17495 Striga asiatica HOM05D006698 ORTHO05D008415 3.3e-186 655.6 541 59.9
MD09G1232000 Malus domestica HOM05D006698 ORTHO05D008415 5.6e-186 654.8 542 59.2
Peaxi162Scf00287g01719 Petunia axillaris HOM05D006698 ORTHO05D008415 7.3e-186 654.4 540 61.1
Duzib093G0690 Durio zibethinus HOM05D006698 ORTHO05D008415 2.1e-185 652.9 540 59.8
CsaV3_3G045670 Cucumis sativus L. HOM05D006698 ORTHO05D008415 4.8e-185 651.7 540 56.9
MELO3C003770.2 Cucumis melo HOM05D006698 ORTHO05D008415 6.2e-185 651.4 540 57.0
Migut.N03146 Erythranthe guttata HOM05D006698 ORTHO05D008415 6.2e-185 651.4 541 58.4
Eucgr.F01632 Eucalyptus grandis HOM05D006698 ORTHO05D008415 2.4e-184 649.4 542 57.7
CANSAT35G1394 Cannabis sativa HOM05D006698 ORTHO05D008415 1.3e-182 643.7 541 57.1
PSO170G5361 Papaver somniferum HOM05D006698 ORTHO05D008415 1.3e-182 643.7 540 58.3
A04p12330 Brassica napus HOM05D006698 ORTHO05D008415 2.2e-182 642.9 542 57.9
BraA04t16897Z Brassica rapa HOM05D006698 ORTHO05D008415 2.2e-182 642.9 542 58.3
RcHm_v2.0_Chr6g0302501 Rosa chinensis HOM05D006698 ORTHO05D008415 5.4e-181 638.3 541 57.5
Aqoxy5G01450 Aquilegia oxysepala HOM05D006698 ORTHO05D008415 7.1e-181 637.9 539 58.1
arahy.Tifrunner.gnm1.ann1.HU0S2W Arachis hypogaea HOM05D006698 ORTHO05D008415 1.2e-180 637.1 542 57.6
Cc10_g01920 Coffea canephora HOM05D006698 ORTHO05D008415 2.1e-180 636.3 601 55.9
Potri.005G236400 Populus trichocarpa HOM05D006698 ORTHO05D008415 2.1e-180 636.3 542 57.2
Oeu027551.1 Olea europaea HOM05D006698 ORTHO05D008415 2.7e-180 636.0 491 63.3
Sed0002694 Sechium edule HOM05D006698 ORTHO05D008415 6.0e-180 634.8 540 55.7
arahy.Tifrunner.gnm1.ann1.32JQZQ Arachis hypogaea HOM05D006698 ORTHO05D008415 1.0e-179 634.0 542 57.4
Hund24100 Selenicereus undatus HOM05D006698 ORTHO05D008415 1.0e-179 634.0 540 56.9
C04p46000 Brassica napus HOM05D006698 ORTHO05D008415 1.3e-179 633.6 542 57.4
PSO210G5790 Papaver somniferum HOM05D006698 ORTHO05D008415 1.8e-179 633.3 540 57.6
BolC4t26182H Brassica oleracea HOM05D006698 ORTHO05D008415 2.3e-179 632.9 542 57.2
Sp7g02400 Schrenkiella parvula HOM05D006698 ORTHO05D008415 3.0e-179 632.5 542 57.6
CARHR262700 Cardamine hirsuta HOM05D006698 ORTHO05D008415 5.1e-179 631.7 542 56.8
PGR083G1075 Punica granatum HOM05D006698 ORTHO05D008415 6.7e-179 631.3 547 58.5
Sabra05G0182800 Salix brachista HOM05D006698 ORTHO05D008415 1.6e-177 626.7 542 57.0
Lj1g0011928 Lotus japonicus HOM05D006698 ORTHO05D008415 2.1e-177 626.3 544 57.7
FAN27G1564 Fragaria x ananassa HOM05D006698 ORTHO05D008415 4.8e-177 625.2 540 56.1
FvH4_2g38790 Fragaria vesca HOM05D006698 ORTHO05D008415 3.1e-176 622.5 540 55.9
AL7G50720 Arabidopsis lyrata HOM05D006698 ORTHO05D008415 4.0e-176 622.1 543 56.4
FAN15G2932 Fragaria x ananassa HOM05D006698 ORTHO05D008415 6.9e-176 621.3 540 55.7
AT5G39590 Arabidopsis thaliana HOM05D006698 ORTHO05D008415 1.5e-175 620.2 543 56.2
Cpa.g.sc14.105 Carica papaya HOM05D006698 ORTHO05D008415 4.5e-175 618.6 543 56.9
EL10Ac1g02260 Beta vulgaris HOM05D006698 ORTHO05D008415 7.6e-175 617.8 541 54.3
AUR62035724 Chenopodium quinoa HOM05D006698 ORTHO05D008415 1.3e-174 617.1 540 55.2
Lalb_Chr08g0238541 Lupinus albus HOM05D006698 ORTHO05D008415 1.3e-174 617.1 541 55.3
Carub.0007s3635 Capsella rubella HOM05D006698 ORTHO05D008415 2.2e-174 616.3 543 56.0
Nitab4.5_0001988g0020 Nicotiana tabacum HOM05D006698 ORTHO05D008415 2.5e-173 612.8 488 60.2
PSO170G6283 Papaver somniferum HOM05D006698 ORTHO05D008415 5.5e-173 611.7 548 56.2
PSO210G1198 Papaver somniferum HOM05D006698 ORTHO05D008415 5.5e-173 611.7 548 56.2
Glyma.04G215400 Glycine max HOM05D006698 ORTHO05D008415 7.1e-173 611.3 542 56.6
Atru.chr13.326 Acer truncatum HOM05D006698 ORTHO05D008415 1.2e-172 610.5 468 61.8
Ca_16921_v3 Cicer arietinum L. HOM05D006698 ORTHO05D008415 2.7e-172 609.4 541 55.6
Aa31LG9G16490 Aethionema arabicum HOM05D006698 ORTHO05D008415 3.5e-172 609.0 573 54.1
Ah.11g039450 Amaranthus hybridus HOM05D006698 ORTHO05D008415 1.5e-170 603.6 540 54.8
Phvul.009G147800 Phaseolus vulgaris HOM05D006698 ORTHO05D008415 2.5e-170 602.8 540 55.9
Thhalv10027724m.g Eutrema salsugineum HOM05D006698 ORTHO05D008415 2.8e-169 599.4 541 56.0
VMungo1309G0200 Vigna mungo HOM05D006698 ORTHO05D008415 9.0e-168 594.3 541 55.5
TPR.G18731 Trifolium pratense HOM05D006698 ORTHO05D008415 1.7e-166 590.1 541 52.7
Medtr3g095660 Medicago truncatula HOM05D006698 ORTHO05D008415 4.2e-165 585.5 541 53.4
MBI09_g13764_MAGBIO Magnolia biondii HOM05D006698 ORTHO05D008415 5.5e-165 585.1 544 56.1
SalBow8G5338 Salvia bowleyana HOM05D006698 ORTHO05D008415 4.6e-164 582.0 591 52.3
BcaB06g27346 Brassica carinata HOM05D006698 ORTHO05D008415 1.2e-159 567.4 541 52.7
Actinidia16966 Actinidia chinensis HOM05D006698 ORTHO05D008415 1.5e-159 567.0 446 61.2
AUR62035437 Chenopodium quinoa HOM05D006698 ORTHO05D008415 3.2e-157 559.3 460 57.0
FAN20G0171 Fragaria x ananassa HOM05D006698 ORTHO05D008415 7.2e-157 558.1 633 46.9
ClCG05G018510 Citrullus lanatus HOM05D006698 ORTHO05D008415 1.4e-155 553.9 540 50.6
Dinv31825 Davidia involucrata HOM05D006698 ORTHO05D008415 1.1e-154 550.8 539 54.0
Manes.18G015700 Manihot esculenta HOM05D006698 ORTHO05D008415 1.6e-148 530.4 427 60.0
HPP92_014935 Vanilla planifolia HOM05D006698 ORTHO05D008415 2.2e-145 520.0 543 49.5
SHI08084 Sapria himalayana HOM05D006698 ORTHO05D008415 2.2e-142 510.0 559 49.4
CDE09G0091 Ceratophyllum demersum HOM05D006698 ORTHO05D008415 2.0e-135 486.9 469 51.4
Os04g0663700 Oryza sativa ssp. japonica HOM05D006698 ORTHO05D008415 7.7e-135 485.0 555 47.9
ATR0147G003 Amborella trichopoda HOM05D006698 ORTHO05D008415 2.2e-134 483.4 552 47.8
Psat5g063280 Pisum sativum HOM05D006698 ORTHO05D008415 8.5e-134 481.5 471 51.4
Zm00001eb067290 Zea mays HOM05D006698 ORTHO05D008415 1.4e-128 464.2 563 46.4
Sc15g0005110 Simmondsia chinensis HOM05D006698 ORTHO05D008415 2.8e-116 423.3 400 51.2
SEGI_26467 Sequoiadendron giganteum HOM05D006698 ORTHO05D008415 1.7e-113 414.1 479 45.3
Potri.002G025032 Populus trichocarpa HOM05D006698 ORTHO05D008415 4.9e-113 412.5 311 63.0
Pp3c16_7090 Physcomitrium patens HOM05D006698 ORTHO05D008415 2.6e-98 363.6 558 37.1
Pp3c5_11350 Physcomitrium patens HOM05D006698 ORTHO05D008415 9.5e-93 345.1 560 36.6
Mapoly0043s0042 Marchantia polymorpha HOM05D006698 ORTHO05D008415 8.9e-91 338.6 574 37.5
SMO145G0265 Selaginella moellendorffii HOM05D006698 ORTHO05D008415 4.7e-84 316.2 476 38.7
AagrBONN_evm.TU.Sc2ySwM_344.812 Anthoceros agrestis HOM05D006698 ORTHO05D008415 2.3e-78 297.4 570 36.8
AagrBONN_evm.TU.Sc2ySwM_344.842 Anthoceros agrestis HOM05D006698 ORTHO05D008415 7.3e-77 292.4 562 36.7
unitig_27.g25099 Utricularia gibba HOM05D006698 ORTHO05D008415 1.2e-71 275.0 223 60.5
Glyma.06G150801 Glycine max HOM05D006698 ORTHO05D008415 3.4e-58 230.3 207 53.1
unitig_27.g25098 Utricularia gibba HOM05D006698 ORTHO05D008415 3.3e-53 213.8 249 44.6
Potri.002G024966 Populus trichocarpa HOM05D006698 ORTHO05D008415 1.7e-49 201.4 183 54.6
QL03p018220 Quercus lobata HOM05D006698 ORTHO05D008415 9.0e-43 179.1 109 74.3
QL03p018243 Quercus lobata HOM05D006698 ORTHO05D008415 1.4e-32 145.2 196 41.3
HanXRQChr05g0147331 Helianthus annuus HOM05D006698 ORTHO05D008415 6.1e-31 139.8 119 52.9
Actinidia16965 Actinidia chinensis HOM05D006698 ORTHO05D008415 3.1e-27 127.5 76 76.3
Medtr7g098720 Medicago truncatula HOM05D006698 ORTHO05D008415 3.3e-21 107.5 124 43.5
Oeu046256.1 Olea europaea HOM05D006698 ORTHO05D008415 2.1e-15 88.2 59 62.7
Cpa.g.sc14.104 Carica papaya HOM05D006698 ORTHO05D008415 4.4e-13 80.5 99 48.5
Duzib116G0861 Durio zibethinus HOM05D006698 ORTHO05D008415 9.5e-08 62.8 34 79.4
ATR0370G001 Amborella trichopoda HOM05D006698 ORTHO05D008415 6.1e-07 60.1 51 60.8
Glyma.19G197300 Glycine max HOM05D006431 ORTHO05D007918 6.1e-07 60.1 209 25.4
Glyma.03G199700 Glycine max HOM05D006431 ORTHO05D007918 1.4e-06 58.9 209 24.9
Phvul.001G193600 Phaseolus vulgaris HOM05D006431 ORTHO05D007918 1.8e-06 58.5 248 25.8
ATR0772G016 Amborella trichopoda HOM05D006431 ORTHO05D007918 8.8e-06 56.2 245 25.3


User provided reference genes

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