Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A791T84 Lonicera japonica HOM05D005397 ORTHO05D006493 1.9e-71 272.3 133 100.0
Dinv31812 Davidia involucrata HOM05D005397 ORTHO05D006493 5.0e-43 177.9 105 82.9
SalBow7G0110 Salvia bowleyana HOM05D005397 ORTHO05D006493 5.0e-43 177.9 128 70.3
DCAR_013850 Daucus carota HOM05D005397 ORTHO05D006493 6.5e-43 177.6 107 78.5
Nitab4.5_0011205g0010 Nicotiana tabacum HOM05D005397 ORTHO05D006493 6.5e-43 177.6 104 81.7
GSVIVG01022614001 Vitis vinifera HOM05D005397 ORTHO05D006493 1.9e-42 176.0 103 81.6
Solyc04g081070.3 Solanum lycopersicum HOM05D005397 ORTHO05D006493 4.2e-42 174.9 106 78.3
Nn5g29235 Nelumbo nucifera HOM05D005397 ORTHO05D006493 1.2e-41 173.3 105 80.0
Sopen04g034690 Solanum pennellii HOM05D005397 ORTHO05D006493 1.2e-41 173.3 104 78.8
TAR145G0001 Trochodendron aralioides HOM05D005397 ORTHO05D006493 2.7e-41 172.2 105 80.0
CAN.G851.6 Capsicum annuum HOM05D005397 ORTHO05D006493 4.7e-41 171.4 106 77.4
Peaxi162Scf00287g01315 Petunia axillaris HOM05D005397 ORTHO05D006493 4.7e-41 171.4 104 78.8
CSS0019191 Camellia sinensis var. sinensis HOM05D005397 ORTHO05D006493 1.4e-40 169.9 105 80.0
PGSC0003DMG400003765 Solanum tuberosum HOM05D005397 ORTHO05D006493 1.4e-40 169.9 106 76.4
ECA247G2991 Erigeron canadensis HOM05D005397 ORTHO05D006493 3.0e-40 168.7 105 75.2
Actinidia37980 Actinidia chinensis HOM05D005397 ORTHO05D006493 1.1e-39 166.8 105 78.1
Migut.C00793 Erythranthe guttata HOM05D005397 ORTHO05D006493 1.1e-39 166.8 105 77.1
Oeu046246.1 Olea europaea HOM05D005397 ORTHO05D006493 2.0e-39 166.0 141 62.4
PGR083G1852 Punica granatum HOM05D005397 ORTHO05D006493 2.6e-39 165.6 126 68.3
Sc02g0005180 Simmondsia chinensis HOM05D005397 ORTHO05D006493 2.6e-39 165.6 107 74.8
Aqoxy6G02360 Aquilegia oxysepala HOM05D005397 ORTHO05D006493 4.4e-39 164.9 127 69.3
AUR62034574 Chenopodium quinoa HOM05D005397 ORTHO05D006493 4.4e-39 164.9 128 64.8
SGA_v2.0_scaffold11G05874 Striga asiatica HOM05D005397 ORTHO05D006493 4.4e-39 164.9 105 73.3
Rhsim07G0244600 Rhododendron simsii HOM05D005397 ORTHO05D006493 9.7e-39 163.7 105 75.2
vmacro04326 Vaccinium macrocarpon HOM05D005397 ORTHO05D006493 9.7e-39 163.7 105 77.1
PSO541G6090 Papaver somniferum HOM05D005397 ORTHO05D006493 1.7e-38 162.9 128 65.6
PSO675G6273 Papaver somniferum HOM05D005397 ORTHO05D006493 2.2e-38 162.5 106 73.6
Hund17223 Selenicereus undatus HOM05D005397 ORTHO05D006493 2.2e-38 162.5 105 75.2
MSTRG.1224 Avicennia marina HOM05D005397 ORTHO05D006493 3.7e-38 161.8 105 76.2
AUR62014423 Chenopodium quinoa HOM05D005397 ORTHO05D006493 3.7e-38 161.8 105 72.4
Cc10_g02070 Coffea canephora HOM05D005397 ORTHO05D006493 4.8e-38 161.4 105 73.3
CDE05G0602 Ceratophyllum demersum HOM05D005397 ORTHO05D006493 8.2e-38 160.6 127 63.0
TAR625G0278 Trochodendron aralioides HOM05D005397 ORTHO05D006493 8.2e-38 160.6 103 75.7
Actinidia29797 Actinidia chinensis HOM05D005397 ORTHO05D006493 1.1e-37 160.2 104 75.0
EL10Ac1g00550 Beta vulgaris HOM05D005397 ORTHO05D006493 1.1e-37 160.2 128 64.8
ClCG08G014500 Citrullus lanatus HOM05D005397 ORTHO05D006493 2.0e-36 156.0 106 70.8
RcHm_v2.0_Chr6g0302171 Rosa chinensis HOM05D005397 ORTHO05D006493 7.7e-36 154.1 128 63.3
ATR0149G027 Amborella trichopoda HOM05D005397 ORTHO05D006493 1.0e-35 153.7 106 68.9
MELO3C010989.2 Cucumis melo HOM05D005397 ORTHO05D006493 1.0e-35 153.7 106 69.8
CsaV3_2G029290 Cucumis sativus L. HOM05D005397 ORTHO05D006493 1.0e-35 153.7 106 69.8
FvH4_2g39070 Fragaria vesca HOM05D005397 ORTHO05D006493 1.0e-35 153.7 128 63.3
Prupe.1G370400 Prunus persica HOM05D005397 ORTHO05D006493 1.0e-35 153.7 105 73.3
CANSAT78G0864 Cannabis sativa HOM05D005397 ORTHO05D006493 1.3e-35 153.3 104 71.2
FAN20G2387 Fragaria x ananassa HOM05D005397 ORTHO05D006493 2.2e-35 152.5 128 62.5
HanXRQChr04g0106461 Helianthus annuus HOM05D005397 ORTHO05D006493 2.2e-35 152.5 106 70.8
FAN27G0831 Fragaria x ananassa HOM05D005397 ORTHO05D006493 3.8e-35 151.8 128 62.5
HanXRQChr02g0041801 Helianthus annuus HOM05D005397 ORTHO05D006493 5.0e-35 151.4 105 68.6
Eucgr.F01622 Eucalyptus grandis HOM05D005397 ORTHO05D006493 6.5e-35 151.0 105 68.6
Sed0023445 Sechium edule HOM05D005397 ORTHO05D006493 1.1e-34 150.2 105 70.5
Os02g0122400 Oryza sativa ssp. japonica HOM05D005397 ORTHO05D006493 4.2e-34 148.3 107 64.5
FAN15G0228 Fragaria x ananassa HOM05D005397 ORTHO05D006493 9.4e-34 147.1 105 71.4
SMO116G0264 Selaginella moellendorffii HOM05D005397 ORTHO05D006493 1.6e-33 146.4 119 58.0
CDE05G2012 Ceratophyllum demersum HOM05D005397 ORTHO05D006493 2.1e-33 146.0 95 70.5
SEGI_32422 Sequoiadendron giganteum HOM05D005397 ORTHO05D006493 2.7e-33 145.6 128 55.5
QL02p010766 Quercus lobata HOM05D005397 ORTHO05D006493 4.7e-33 144.8 104 71.2
Haze_22588 Corylus avellana HOM05D005397 ORTHO05D006493 8.0e-33 144.1 102 73.5
Oeu046244.1 Olea europaea HOM05D005397 ORTHO05D006493 1.4e-32 143.3 86 82.6
Lj5g0007176 Lotus japonicus HOM05D005397 ORTHO05D006493 1.8e-32 142.9 105 66.7
Lalb_Chr24g0398791 Lupinus albus HOM05D005397 ORTHO05D006493 2.3e-32 142.5 105 65.7
Gohir.D05G191300 Gossypium hirsutum HOM05D005397 ORTHO05D006493 4.0e-32 141.7 105 68.6
Zm00001eb208440 Zea mays HOM05D005397 ORTHO05D006493 4.0e-32 141.7 129 56.6
Cfa013909 Carpinus fangiana HOM05D005397 ORTHO05D006493 5.2e-32 141.4 102 72.5
Lsat_1_v5_gn_1_16260 Lactuca sativa HOM05D005397 ORTHO05D006493 6.8e-32 141.0 101 65.3
TPR.G40295 Trifolium pratense HOM05D005397 ORTHO05D006493 8.8e-32 140.6 105 65.7
AagrBONN_evm.TU.Sc2ySwM_228.2424 Anthoceros agrestis HOM05D005397 ORTHO05D006493 2.0e-31 139.4 128 53.9
Gohir.A05G188200 Gossypium hirsutum HOM05D005397 ORTHO05D006493 2.0e-31 139.4 105 67.6
Thecc.08G038000 Theobroma cacao HOM05D005397 ORTHO05D006493 2.0e-31 139.4 128 57.8
Cpa.g.sc140.23 Carica papaya HOM05D005397 ORTHO05D006493 2.6e-31 139.0 105 70.5
CiPaw.07G153900 Carya illinoinensis HOM05D005397 ORTHO05D006493 2.6e-31 139.0 105 68.6
Gorai.009G196600 Gossypium raimondii HOM05D005397 ORTHO05D006493 3.4e-31 138.7 105 67.6
Medtr1g023310 Medicago truncatula HOM05D005397 ORTHO05D006493 5.7e-31 137.9 105 64.8
Potri.005G235000 Populus trichocarpa HOM05D005397 ORTHO05D006493 7.5e-31 137.5 102 66.7
Psat6g005320 Pisum sativum HOM05D005397 ORTHO05D006493 9.7e-31 137.1 105 64.8
Manes.18G017200 Manihot esculenta HOM05D005397 ORTHO05D006493 1.3e-30 136.7 102 67.6
Sabra05G0181200 Salix brachista HOM05D005397 ORTHO05D006493 1.3e-30 136.7 102 66.7
Atru.chr13.353 Acer truncatum HOM05D005397 ORTHO05D006493 1.7e-30 136.3 100 67.0
HPP92_022425 Vanilla planifolia HOM05D005397 ORTHO05D006493 1.7e-30 136.3 128 53.9
Pp3c21_1260 Physcomitrium patens HOM05D005397 ORTHO05D006493 2.8e-30 135.6 132 52.3
arahy.Tifrunner.gnm1.ann1.FP07R2 Arachis hypogaea HOM05D005397 ORTHO05D006493 3.7e-30 135.2 106 63.2
COL.COLO4_26194 Corchorus olitorius HOM05D005397 ORTHO05D006493 3.7e-30 135.2 99 68.7
Duzib093G1874 Durio zibethinus HOM05D005397 ORTHO05D006493 3.7e-30 135.2 98 70.4
Ca_13392_v3 Cicer arietinum L. HOM05D005397 ORTHO05D006493 6.3e-30 134.4 105 62.9
Glyma.14G216700 Glycine max HOM05D005397 ORTHO05D006493 1.1e-29 133.7 105 61.9
Glyma.17G255300 Glycine max HOM05D005397 ORTHO05D006493 1.1e-29 133.7 105 61.9
Mapoly0064s0104 Marchantia polymorpha HOM05D005397 ORTHO05D006493 1.1e-29 133.7 128 52.3
arahy.Tifrunner.gnm1.ann1.WNU9KC Arachis hypogaea HOM05D005397 ORTHO05D006493 1.4e-29 133.3 106 62.3
Ciclev10000372m.g Citrus clementina HOM05D005397 ORTHO05D006493 1.8e-29 132.9 100 65.0
Phvul.001G009500 Phaseolus vulgaris HOM05D005397 ORTHO05D006493 3.1e-29 132.1 105 61.9
VMungo0647G1731 Vigna mungo HOM05D005397 ORTHO05D006493 4.1e-29 131.7 105 61.9
AL8G18860 Arabidopsis lyrata HOM05D005397 ORTHO05D006493 1.2e-28 130.2 105 63.8
Lalb_Chr14g0369691 Lupinus albus HOM05D005397 ORTHO05D006493 1.6e-28 129.8 105 61.9
AT5G42480 Arabidopsis thaliana HOM05D005397 ORTHO05D006493 2.0e-28 129.4 105 63.8
SEGI_36408 Sequoiadendron giganteum HOM05D005397 ORTHO05D006493 2.7e-28 129.0 96 60.4
Aa31LG9G12600 Aethionema arabicum HOM05D005397 ORTHO05D006493 3.5e-28 128.6 105 62.9
Carub.0008s0657 Capsella rubella HOM05D005397 ORTHO05D006493 3.5e-28 128.6 105 62.9
THA.LOC104810654 Tarenaya hassleriana HOM05D005397 ORTHO05D006493 5.9e-28 127.9 105 61.9
Thhalv10003151m.g Eutrema salsugineum HOM05D005397 ORTHO05D006493 7.7e-28 127.5 105 61.9
DCAR_017505 Daucus carota HOM05D005397 ORTHO05D006493 1.0e-27 127.1 90 65.6
Sp2g06890 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.0e-27 127.1 105 62.9
SpUn0014_0040 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.0e-27 127.1 105 62.9
SpUn0090_0020 Schrenkiella parvula HOM05D005397 ORTHO05D006493 1.0e-27 127.1 105 62.9
CAN.G1213.4 Capsicum annuum HOM05D005397 ORTHO05D006493 1.1e-26 123.6 74 81.1
BcaC02g10766 Brassica carinata HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
BcaC06g31756 Brassica carinata HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
A06p48310 Brassica napus HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
C04p25360 Brassica napus HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
BolC4t24042H Brassica oleracea HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
BraA06t27701Z Brassica rapa HOM05D005397 ORTHO05D006493 1.9e-26 122.9 106 62.3
CARHR181880 Cardamine hirsuta HOM05D005397 ORTHO05D006493 1.9e-26 122.9 105 59.0
TWI12G0995 Tripterygium wilfordii HOM05D005397 ORTHO05D006493 3.2e-26 122.1 105 61.0
CBR_g40449 Chara braunii HOM05D005397 ORTHO05D006493 2.2e-22 109.4 117 45.3
CBR_g40437 Chara braunii HOM05D005397 ORTHO05D006493 4.8e-22 108.2 126 41.3
PRCOL_00000058 Prasinoderma coloniale HOM05D005397 ORTHO05D006493 8.6e-19 97.4 128 41.4
MCO06G167 Micromonas commoda HOM05D005397 ORTHO05D006493 5.2e-16 88.2 130 43.1
AUR62019159 Chenopodium quinoa HOM05D005397 ORTHO05D006493 2.6e-15 85.9 64 71.9
MD15G1016900 Malus domestica HOM05D005397 ORTHO05D006493 3.5e-12 75.5 49 71.4
PGSC0003DMG400037196 Solanum tuberosum HOM05D008291 ORTHO05D012653 3.1e-08 62.4 52 63.5
DCAR_023244 Daucus carota HOM05D001982 ORTHO05D008035 6.8e-08 61.2 105 37.1
Lsat_1_v5_gn_0_10501 Lactuca sativa HOM05D001982 ORTHO05D008035 6.8e-08 61.2 105 38.1
Lj9A413T50 Lonicera japonica HOM05D001982 ORTHO05D008035 7.5e-07 57.8 138 29.7
PRCOL_00002524 Prasinoderma coloniale HOM05D005397 ORTHO05D006493 9.8e-07 57.4 129 31.8
C05p46060 Brassica napus HOM05D001982 ORTHO05D008035 8.3e-06 54.3 106 34.0
BolC5t33333H Brassica oleracea HOM05D001982 ORTHO05D008035 8.3e-06 54.3 106 34.0
CDE04G2352 Ceratophyllum demersum HOM05D001982 ORTHO05D008035 8.3e-06 54.3 105 30.5


User provided reference genes

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