Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A739G26 Lonicera japonica HOM05D000921 ORTHO05D004782 5.8e-147 524.2 270 100.0
Dinv42602 Davidia involucrata HOM05D000921 ORTHO05D004782 2.0e-75 286.6 270 59.3
DCAR_012852 Daucus carota HOM05D000921 ORTHO05D004782 1.0e-71 274.2 270 56.3
Actinidia19246 Actinidia chinensis HOM05D000921 ORTHO05D004782 3.0e-71 272.7 269 55.8
GSVIVG01009194001 Vitis vinifera HOM05D000921 ORTHO05D004782 3.0e-71 272.7 270 55.6
TAR381G0975 Trochodendron aralioides HOM05D000921 ORTHO05D004782 4.1e-68 262.3 270 53.3
Potri.002G111000 Populus trichocarpa HOM05D000921 ORTHO05D004782 6.5e-66 255.0 271 52.8
CiPaw.07G164000 Carya illinoinensis HOM05D000921 ORTHO05D004782 5.5e-65 251.9 270 51.1
QL09p018095 Quercus lobata HOM05D000921 ORTHO05D004782 9.4e-65 251.1 271 52.0
MD15G1387600 Malus domestica HOM05D000921 ORTHO05D004782 1.6e-64 250.4 270 50.7
RcHm_v2.0_Chr7g0235181 Rosa chinensis HOM05D000921 ORTHO05D004782 3.6e-64 249.2 266 51.1
FAN13G0958 Fragaria x ananassa HOM05D000921 ORTHO05D004782 4.0e-63 245.7 266 50.4
ECA246G1489 Erigeron canadensis HOM05D000921 ORTHO05D004782 6.7e-63 245.0 270 49.3
Haze_22475 Corylus avellana HOM05D000921 ORTHO05D004782 8.8e-63 244.6 270 50.7
Atru.chr13.992 Acer truncatum HOM05D000921 ORTHO05D004782 1.1e-62 244.2 270 48.5
FvH4_5g34530 Fragaria vesca HOM05D000921 ORTHO05D004782 2.6e-62 243.0 266 50.0
Manes.18G056822 Manihot esculenta HOM05D000921 ORTHO05D004782 2.6e-62 243.0 261 51.3
FAN18G1361 Fragaria x ananassa HOM05D000921 ORTHO05D004782 3.3e-62 242.7 266 50.0
FAN08G1747 Fragaria x ananassa HOM05D000921 ORTHO05D004782 5.7e-62 241.9 266 49.6
Prupe.1G534000 Prunus persica HOM05D000921 ORTHO05D004782 2.2e-61 240.0 270 48.9
CAN.G475.8 Capsicum annuum HOM05D000921 ORTHO05D004782 2.8e-61 239.6 268 52.6
Thecc.08G072600 Theobroma cacao HOM05D000921 ORTHO05D004782 3.7e-61 239.2 270 50.0
Ciclev10000002m.g Citrus clementina HOM05D000921 ORTHO05D004782 4.8e-61 238.8 267 48.7
Medtr3g100060 Medicago truncatula HOM05D000921 ORTHO05D004782 6.3e-61 238.4 271 49.8
Glyma.06G097800 Glycine max HOM05D000921 ORTHO05D004782 8.2e-61 238.0 263 52.5
Nn5g29852 Nelumbo nucifera HOM05D000921 ORTHO05D004782 8.2e-61 238.0 276 48.9
Eucgr.F00430 Eucalyptus grandis HOM05D000921 ORTHO05D004782 1.1e-60 237.7 270 51.5
Sabra02G0087600 Salix brachista HOM05D000921 ORTHO05D004782 1.1e-60 237.7 279 48.7
Sopen04g030240 Solanum pennellii HOM05D000921 ORTHO05D004782 1.4e-60 237.3 267 51.7
Lj1g0023313 Lotus japonicus HOM05D000921 ORTHO05D004782 1.8e-60 236.9 258 51.2
TWI56G0737 Tripterygium wilfordii HOM05D000921 ORTHO05D004782 2.4e-60 236.5 268 50.0
Nitab4.5_0000131g0100 Nicotiana tabacum HOM05D000921 ORTHO05D004782 5.3e-60 235.3 268 52.2
Aqoxy6G00846 Aquilegia oxysepala HOM05D000921 ORTHO05D004782 9.1e-60 234.6 263 51.0
arahy.Tifrunner.gnm1.ann1.YNEA8K Arachis hypogaea HOM05D000921 ORTHO05D004782 2.6e-59 233.0 265 49.4
Gohir.D06G030750 Gossypium hirsutum HOM05D000921 ORTHO05D004782 2.6e-59 233.0 268 48.5
Lsat_1_v5_gn_6_107401 Lactuca sativa HOM05D000921 ORTHO05D004782 3.5e-59 232.6 268 48.9
Nitab4.5_0002391g0010 Nicotiana tabacum HOM05D000921 ORTHO05D004782 3.5e-59 232.6 268 51.5
HanXRQChr05g0163481 Helianthus annuus HOM05D000921 ORTHO05D004782 4.5e-59 232.3 264 50.8
Peaxi162Scf00454g00119 Petunia axillaris HOM05D000921 ORTHO05D004782 4.5e-59 232.3 268 50.7
Gorai.010G033800 Gossypium raimondii HOM05D000921 ORTHO05D004782 7.7e-59 231.5 268 48.1
COL.COLO4_35265 Corchorus olitorius HOM05D000921 ORTHO05D004782 2.2e-58 229.9 269 49.1
Gohir.A06G031500 Gossypium hirsutum HOM05D000921 ORTHO05D004782 5.0e-58 228.8 268 47.8
Phvul.009G035500 Phaseolus vulgaris HOM05D000921 ORTHO05D004782 5.0e-58 228.8 263 50.6
PGR042G3444 Punica granatum HOM05D000921 ORTHO05D004782 5.0e-58 228.8 270 48.5
Cc10_g08450 Coffea canephora HOM05D000921 ORTHO05D004782 1.5e-57 227.3 295 46.8
Ca_16011_v3 Cicer arietinum L. HOM05D000921 ORTHO05D004782 2.5e-57 226.5 262 50.4
Lalb_Chr23g0270001 Lupinus albus HOM05D000921 ORTHO05D004782 5.5e-57 225.3 263 49.0
MELO3C003512.2 Cucumis melo HOM05D000921 ORTHO05D004782 7.2e-57 224.9 246 50.0
CsaV3_3G048070 Cucumis sativus L. HOM05D000921 ORTHO05D004782 7.2e-57 224.9 246 50.0
Gohir.D02G086100 Gossypium hirsutum HOM05D000921 ORTHO05D004782 7.2e-57 224.9 264 48.1
Gorai.005G097000 Gossypium raimondii HOM05D000921 ORTHO05D004782 7.2e-57 224.9 264 48.1
Psat5g049440 Pisum sativum HOM05D000921 ORTHO05D004782 7.2e-57 224.9 272 47.8
TPR.G6323 Trifolium pratense HOM05D000921 ORTHO05D004782 1.6e-56 223.8 272 47.1
ClCG11G014650 Citrullus lanatus HOM05D000921 ORTHO05D004782 2.1e-56 223.4 248 50.4
Rhsim06G0071200 Rhododendron simsii HOM05D000921 ORTHO05D004782 4.7e-56 222.2 338 41.1
Sed0001609 Sechium edule HOM05D000921 ORTHO05D004782 6.1e-56 221.9 250 48.4
Glyma.04G096100 Glycine max HOM05D000921 ORTHO05D004782 3.0e-55 219.5 263 49.8
SGA_v2.0_scaffold28G11888 Striga asiatica HOM05D000921 ORTHO05D004782 5.2e-55 218.8 268 48.1
VMungo1309G2985 Vigna mungo HOM05D000921 ORTHO05D004782 2.0e-54 216.9 263 47.9
Gohir.A02G078801 Gossypium hirsutum HOM05D000921 ORTHO05D004782 2.6e-54 216.5 262 46.9
CANSAT54G2772 Cannabis sativa HOM05D000921 ORTHO05D004782 1.7e-53 213.8 270 45.6
MSTRG.24432 Avicennia marina HOM05D000921 ORTHO05D004782 1.1e-52 211.1 269 44.2
AUR62014358 Chenopodium quinoa HOM05D000921 ORTHO05D004782 1.6e-51 207.2 269 45.4
AUR62019100 Chenopodium quinoa HOM05D000921 ORTHO05D004782 1.6e-51 207.2 281 44.5
Migut.N02862 Erythranthe guttata HOM05D000921 ORTHO05D004782 1.6e-51 207.2 267 44.6
EL10Ac1g00502 Beta vulgaris HOM05D000921 ORTHO05D004782 3.5e-51 206.1 268 46.6
DCAR_019322 Daucus carota HOM05D000921 ORTHO05D004782 5.0e-50 202.2 277 44.4
Os02g0162766 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004782 1.1e-49 201.1 259 44.8
Hund26819 Selenicereus undatus HOM05D000921 ORTHO05D004782 5.5e-49 198.7 268 41.8
Sc06g0003790 Simmondsia chinensis HOM05D000921 ORTHO05D004782 9.4e-49 198.0 260 43.8
Zm00001eb207540 Zea mays HOM05D000921 ORTHO05D004782 1.2e-48 197.6 260 43.5
CDE02G0144 Ceratophyllum demersum HOM05D000921 ORTHO05D004782 5.7e-46 188.7 254 44.5
ATR0767G173 Amborella trichopoda HOM05D000921 ORTHO05D004782 4.2e-41 172.6 268 42.2
unitig_578.g16055 Utricularia gibba HOM05D000921 ORTHO05D004782 2.8e-40 169.9 249 41.8
Duzib116G0480 Durio zibethinus HOM05D000921 ORTHO05D004782 4.7e-40 169.1 202 49.5
MD08G1200500 Malus domestica HOM05D000921 ORTHO05D004782 4.7e-40 169.1 163 53.4
HPP92_013154 Vanilla planifolia HOM05D000921 ORTHO05D004782 5.2e-39 165.6 262 42.4
Os06g0678700 Oryza sativa ssp. japonica HOM05D000921 ORTHO05D004782 6.4e-37 158.7 261 37.5
Oeu028591.1 Olea europaea HOM05D000921 ORTHO05D004782 2.3e-34 150.2 270 38.5
Ah.05g171390 Amaranthus hybridus HOM05D000921 ORTHO05D004782 2.6e-30 136.7 165 44.8
arahy.Tifrunner.gnm1.ann1.KCR83B Arachis hypogaea HOM05D000921 ORTHO05D004782 4.0e-23 112.8 94 56.4
Mapoly0001s0542 Marchantia polymorpha HOM05D000921 ORTHO05D004782 4.6e-19 99.4 223 30.9
AagrBONN_evm.TU.Sc2ySwM_117.180 Anthoceros agrestis HOM05D000921 ORTHO05D004782 6.6e-18 95.5 194 32.5
Pp3c20_23460 Physcomitrium patens HOM05D000921 ORTHO05D004782 1.2e-16 91.3 231 32.0
CBR_g40583 Chara braunii HOM05D000921 ORTHO05D004782 4.7e-16 89.4 238 28.6
vmacro21344 Vaccinium macrocarpon HOM05D000921 ORTHO05D004782 8.1e-16 88.6 110 49.1
Nn1g04217 Nelumbo nucifera HOM05D001236 ORTHO05D001090 8.4e-13 78.6 72 54.2
Nn8g40360 Nelumbo nucifera HOM05D000921 ORTHO05D004782 2.4e-12 77.0 75 50.7
CSS0006749 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 1.9e-09 67.4 73 47.9
Lsat_1_v5_gn_3_136420 Lactuca sativa HOM05D001891 ORTHO05D007474 1.9e-09 67.4 94 44.7
Ah.05g171400 Amaranthus hybridus HOM05D000921 ORTHO05D004782 6.8e-07 58.9 109 37.6
CSS0042429 Camellia sinensis var. sinensis HOM05D000921 ORTHO05D004782 4.4e-06 56.2 51 49.0
Cpa.g.sc21.32 Carica papaya HOM05D000921 ORTHO05D004782 4.4e-06 56.2 53 49.1


User provided reference genes

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