Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 4.9e-116 421.4 253 100.0
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 2.6e-56 223.0 180 66.1
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 7.2e-51 204.9 178 64.6
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 1.2e-26 124.4 150 55.3
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 6.4e-23 112.1 191 44.0
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 2.4e-22 110.2 148 54.1
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 2.1e-21 107.1 148 54.1
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 2.3e-20 103.6 132 54.5
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 3.9e-20 102.8 185 47.6
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 3.9e-20 102.8 145 38.6
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 1.5e-19 100.9 197 31.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 3.3e-19 99.8 183 41.0
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 7.3e-19 98.6 163 39.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 9.5e-19 98.2 134 53.0
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.2e-18 97.8 199 42.2
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 6.2e-18 95.5 150 46.0
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 6.2e-18 95.5 196 43.4
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-17 94.7 135 53.3
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 1.4e-17 94.4 146 37.0
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.4e-17 93.6 133 52.6
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 4.0e-17 92.8 211 43.1
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.2e-17 92.4 129 51.9
Lj4A728G41 Lonicera japonica HOM05D004728 ORTHO05D002375 6.8e-17 92.0 62 72.6
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 1.2e-16 91.3 160 44.4
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 1.2e-16 91.3 122 52.5
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 2.0e-16 90.5 128 50.0
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 2.0e-16 90.5 135 48.9
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 2.6e-16 90.1 125 48.0
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 4.4e-16 89.4 197 38.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.4e-16 89.4 120 50.8
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 4.4e-16 89.4 141 51.1
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 9.9e-16 88.2 174 44.3
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 9.9e-16 88.2 200 43.5
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.3e-15 87.8 220 40.9
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.3e-15 87.8 196 41.3
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 2.2e-15 87.0 178 37.1
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.8e-15 86.3 187 41.7
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 3.8e-15 86.3 199 37.2
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 3.8e-15 86.3 103 52.4
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 3.8e-15 86.3 142 47.9
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 6.4e-15 85.5 140 43.6
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 6.4e-15 85.5 143 45.5
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 8.4e-15 85.1 178 40.4
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 8.4e-15 85.1 133 47.4
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.9e-14 84.0 140 40.0
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 1.9e-14 84.0 155 44.5
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 2.4e-14 83.6 186 39.8
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 2.4e-14 83.6 212 37.3
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-14 83.6 200 37.5
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-14 83.6 194 38.1
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.2e-14 83.2 126 46.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-14 83.2 194 38.1
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.4e-14 82.4 194 38.1
MD08G1189800 Malus domestica HOM05D004728 ORTHO05D002375 5.4e-14 82.4 226 32.3
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 1.2e-13 81.3 122 49.2
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.2e-13 81.3 140 42.9
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 1.2e-13 81.3 132 31.1
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 2.1e-13 80.5 171 42.1
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 2.1e-13 80.5 200 37.0
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 2.1e-13 80.5 109 47.7
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 2.7e-13 80.1 132 47.0
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 6.0e-13 79.0 152 42.8
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 7.8e-13 78.6 109 35.8
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 7.8e-13 78.6 111 52.3
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 1.3e-12 77.8 198 29.8
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 1.3e-12 77.8 183 27.3
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 1.3e-12 77.8 148 43.2
Lsat_1_v5_gn_9_73501 Lactuca sativa HOM05D004728 ORTHO05D002375 1.3e-12 77.8 147 46.3
RcHm_v2.0_Chr7g0238201 Rosa chinensis HOM05D004728 ORTHO05D002375 1.3e-12 77.8 232 34.5
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 1.7e-12 77.4 192 37.0
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 2.3e-12 77.0 125 44.0
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.0e-12 76.6 184 38.6
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 3.0e-12 76.6 175 31.4
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 3.0e-12 76.6 135 45.9
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 3.9e-12 76.3 136 47.8
ECA247G2878 Erigeron canadensis HOM05D004728 ORTHO05D002375 5.1e-12 75.9 161 42.9
Lsat_1_v5_gn_9_73380 Lactuca sativa HOM05D004728 ORTHO05D002375 5.1e-12 75.9 134 47.8
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 6.6e-12 75.5 144 42.4
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 8.7e-12 75.1 129 51.2
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 1.1e-11 74.7 108 49.1
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 1.5e-11 74.3 163 44.8
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 1.5e-11 74.3 150 45.3
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 1.9e-11 73.9 108 50.9
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 3.3e-11 73.2 119 44.5
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.3e-11 73.2 132 43.2
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.3e-11 73.2 153 41.2
unitig_747.g21502 Utricularia gibba HOM05D004728 ORTHO05D002375 3.3e-11 73.2 114 53.5
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.3e-11 72.8 189 34.9
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 5.6e-11 72.4 132 37.9
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 5.6e-11 72.4 186 36.0
ECA232G1403 Erigeron canadensis HOM05D000469 ORTHO05D000131 7.3e-11 72.0 160 40.0
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 7.3e-11 72.0 168 29.8
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 9.6e-11 71.6 108 35.2
Nitab4.5_0007108g0040 Nicotiana tabacum HOM05D021150 ORTHO05D002375 1.2e-10 71.2 108 51.9
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 8.1e-10 68.6 136 41.2
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 8.1e-10 68.6 124 32.3
Lsat_1_v5_gn_1_2860 Lactuca sativa HOM05D004728 ORTHO05D002375 1.1e-09 68.2 129 42.6
Hund23288 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.4e-09 67.8 126 38.1
Sopen04g029740 Solanum pennellii HOM05D021150 ORTHO05D002375 1.4e-09 67.8 123 48.8
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 1.8e-09 67.4 175 41.1
Oeu045992.1 Olea europaea HOM05D004728 ORTHO05D002375 2.4e-09 67.0 209 34.4
arahy.Tifrunner.gnm1.ann1.30DIRF Arachis hypogaea HOM05D012119 ORTHO05D002375 3.1e-09 66.6 120 37.5
vmacro04704 Vaccinium macrocarpon HOM05D004728 ORTHO05D002375 4.0e-09 66.2 143 43.4
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 5.2e-09 65.9 119 42.9
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 6.9e-09 65.5 159 41.5
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.2e-08 64.7 125 34.4
Lsat_1_v5_gn_1_2840 Lactuca sativa HOM05D004728 ORTHO05D002375 1.2e-08 64.7 117 43.6
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 1.2e-08 64.7 200 34.0
Sc01g0000880 Simmondsia chinensis HOM05D004728 ORTHO05D002375 1.2e-08 64.7 107 45.8
CANSAT25G2000 Cannabis sativa HOM05D004728 ORTHO05D002375 1.5e-08 64.3 129 42.6
PSO700G0018 Papaver somniferum HOM05D015253 ORTHO05D002375 1.5e-08 64.3 146 30.8
DCAR_020003 Daucus carota HOM05D004728 ORTHO05D002375 2.0e-08 63.9 128 43.8
Nn5g29980 Nelumbo nucifera HOM05D007310 ORTHO05D002375 2.6e-08 63.5 160 37.5
PSO675G6306 Papaver somniferum HOM05D004728 ORTHO05D002375 2.6e-08 63.5 129 45.7
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 3.4e-08 63.2 201 26.9
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 4.4e-08 62.8 175 38.3
Thecc.08G100800 Theobroma cacao HOM05D004728 ORTHO05D002375 4.4e-08 62.8 134 41.8
Duzib093G1766 Durio zibethinus HOM05D004728 ORTHO05D002375 5.8e-08 62.4 106 50.9
ECA232G3092 Erigeron canadensis HOM05D004728 ORTHO05D045252 5.8e-08 62.4 201 35.3
COL.COLO4_11997 Corchorus olitorius HOM05D004728 ORTHO05D002375 7.6e-08 62.0 169 39.1
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 7.6e-08 62.0 129 29.5
MSTRG.3754 Avicennia marina HOM05D004728 ORTHO05D002375 9.9e-08 61.6 141 39.0
Gohir.A05G223000 Gossypium hirsutum HOM05D004728 ORTHO05D002375 9.9e-08 61.6 121 42.1
Gohir.D05G225700 Gossypium hirsutum HOM05D004728 ORTHO05D002375 9.9e-08 61.6 97 48.5
ClCG08G011340 Citrullus lanatus HOM05D039494 ORTHO05D002375 1.7e-07 60.8 122 45.1
MD15G1317500 Malus domestica HOM05D004728 ORTHO05D002375 1.7e-07 60.8 73 39.7
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.7e-07 60.8 120 37.5
Dinv13237 Davidia involucrata HOM05D004728 ORTHO05D002375 2.2e-07 60.5 178 33.7
arahy.Tifrunner.gnm1.ann1.9U5DT8 Arachis hypogaea HOM05D012119 ORTHO05D002375 2.9e-07 60.1 153 31.4
Prupe.6G194200 Prunus persica HOM05D004728 ORTHO05D002375 3.8e-07 59.7 58 41.4
Sabra16G0196000 Salix brachista HOM05D007310 ORTHO05D002375 3.8e-07 59.7 125 44.8
Nitab4.5_0003374g0020 Nicotiana tabacum HOM05D012586 ORTHO05D012196 4.9e-07 59.3 125 49.6
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 6.4e-07 58.9 133 40.6
arahy.Tifrunner.gnm1.ann1.RDUL0C Arachis hypogaea HOM05D012119 ORTHO05D002375 8.4e-07 58.5 137 35.0
Eucgr.F00382 Eucalyptus grandis HOM05D004728 ORTHO05D002375 8.4e-07 58.5 103 45.6
MD15G1317800 Malus domestica HOM05D004728 ORTHO05D002375 8.4e-07 58.5 110 43.6
Sopen05g029860 Solanum pennellii HOM05D000436 ORTHO05D001944 8.4e-07 58.5 118 44.9
MSTRG.25558 Avicennia marina HOM05D012586 ORTHO05D012196 1.1e-06 58.2 133 40.6
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.1e-06 58.2 174 35.6
Oeu024506.2 Olea europaea HOM05D012586 ORTHO05D012196 1.1e-06 58.2 114 42.1
Hund26995 Selenicereus undatus HOM05D004728 ORTHO05D002375 1.1e-06 58.2 120 40.0
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 1.4e-06 57.8 108 31.5
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 1.4e-06 57.8 142 42.3
arahy.Tifrunner.gnm1.ann1.69RQXC Arachis hypogaea HOM05D012119 ORTHO05D002375 2.4e-06 57.0 201 29.4
FvH4_1g20190 Fragaria vesca HOM05D004728 ORTHO05D002375 2.4e-06 57.0 201 33.8
FAN19G1373 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.4e-06 57.0 201 33.8
Lj4C95T1 Lonicera japonica HOM05D004728 ORTHO05D002375 3.2e-06 56.6 57 49.1
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 4.2e-06 56.2 174 35.6
Actinidia28038 Actinidia chinensis HOM05D007310 ORTHO05D002375 5.4e-06 55.8 96 47.9
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 9.3e-06 55.1 118 24.6
Peaxi162Scf00044g01721 Petunia axillaris HOM05D019315 ORTHO05D002375 9.3e-06 55.1 153 36.6
Solyc05g051450.2 Solanum lycopersicum HOM05D019315 ORTHO05D002375 9.3e-06 55.1 111 45.9


User provided reference genes

Program Settings