Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A728G42 Lonicera japonica HOM05D004728 ORTHO05D002375 5.7e-104 380.9 196 100.0
Lj4A728T44 Lonicera japonica HOM05D004728 ORTHO05D002375 5.8e-56 221.5 180 66.1
Lj4A728T43 Lonicera japonica HOM05D004728 ORTHO05D002375 2.7e-53 212.6 181 64.1
DCAR_012878 Daucus carota HOM05D004728 ORTHO05D002375 2.2e-18 96.7 185 34.6
Dinv07081 Davidia involucrata HOM05D004728 ORTHO05D002375 1.2e-16 90.9 165 33.9
Lj4A728G41 Lonicera japonica HOM05D004728 ORTHO05D002375 1.5e-16 90.5 52 75.0
ECA247G1585 Erigeron canadensis HOM05D004728 ORTHO05D002375 3.4e-16 89.4 101 39.6
Rhsim06G0077100 Rhododendron simsii HOM05D004728 ORTHO05D002375 3.4e-16 89.4 152 36.8
Lsat_1_v5_gn_9_73441 Lactuca sativa HOM05D004728 ORTHO05D002375 5.9e-16 88.6 123 39.8
HanXRQChr17g0556321 Helianthus annuus HOM05D004728 ORTHO05D002375 7.7e-16 88.2 182 32.4
DCAR_012879 Daucus carota HOM05D004728 ORTHO05D002375 1.3e-15 87.4 174 34.5
Actinidia33119 Actinidia chinensis HOM05D004728 ORTHO05D002375 2.2e-15 86.7 181 32.0
HanXRQChr17g0561041 Helianthus annuus HOM05D004728 ORTHO05D002375 6.5e-15 85.1 101 38.6
Oeu045990.1 Olea europaea HOM05D004728 ORTHO05D002375 8.5e-15 84.7 155 35.5
Lj4A95G11 Lonicera japonica HOM05D004728 ORTHO05D002375 1.1e-14 84.3 121 38.8
Actinidia29600 Actinidia chinensis HOM05D004728 ORTHO05D002375 1.9e-14 83.6 203 30.5
PGR042G1769 Punica granatum HOM05D004728 ORTHO05D002375 2.7e-13 79.7 120 40.0
Lj2A538G23 Lonicera japonica HOM05D004728 ORTHO05D002375 3.6e-13 79.3 123 36.6
Actinidia10350 Actinidia chinensis HOM05D004728 ORTHO05D002375 4.6e-13 79.0 163 33.7
MSTRG.1388 Avicennia marina HOM05D004728 ORTHO05D002375 4.6e-13 79.0 178 33.1
Aqoxy476s002 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.1e-13 78.6 129 35.7
Aqoxy6G00703 Aquilegia oxysepala HOM05D004728 ORTHO05D002375 6.1e-13 78.6 129 35.7
Duzib093G2113 Durio zibethinus HOM05D004728 ORTHO05D002375 6.1e-13 78.6 183 34.4
CSS0049063 Camellia sinensis var. sinensis HOM05D004728 ORTHO05D002375 7.9e-13 78.2 148 34.5
Rhsim07G0205400 Rhododendron simsii HOM05D004728 ORTHO05D002375 7.9e-13 78.2 179 33.5
Migut.C01097 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.0e-12 77.8 120 38.3
MSTRG.25340 Avicennia marina HOM05D004728 ORTHO05D002375 1.8e-12 77.0 167 33.5
CiPaw.15G045100 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.8e-12 77.0 171 35.7
Sabra02G0079700 Salix brachista HOM05D004728 ORTHO05D002375 3.0e-12 76.3 205 30.7
Gohir.D05G225800 Gossypium hirsutum HOM05D004728 ORTHO05D002375 3.9e-12 75.9 128 38.3
MSTRG.1387 Avicennia marina HOM05D004728 ORTHO05D002375 5.1e-12 75.5 142 35.2
DCAR_003461 Daucus carota HOM05D004728 ORTHO05D002375 8.8e-12 74.7 95 37.9
Migut.C01161 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.1e-11 74.3 183 31.7
Gorai.005G094700 Gossypium raimondii HOM05D004728 ORTHO05D002375 1.5e-11 73.9 102 37.3
HanXRQChr09g0250741 Helianthus annuus HOM05D004728 ORTHO05D002375 2.0e-11 73.6 170 28.2
EL10Ac1g01137 Beta vulgaris HOM05D004728 ORTHO05D002375 2.5e-11 73.2 122 29.5
CiPaw.15G045000 Carya illinoinensis HOM05D004728 ORTHO05D002375 3.3e-11 72.8 171 33.9
GSVIVG01009093001 Vitis vinifera HOM05D004728 ORTHO05D002375 3.3e-11 72.8 147 32.7
Gohir.A02G076900 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.3e-11 72.4 93 36.6
Gohir.D02G084100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 4.3e-11 72.4 93 36.6
COL.COLO4_11993 Corchorus olitorius HOM05D004728 ORTHO05D002375 7.4e-11 71.6 93 39.8
Gorai.009G233300 Gossypium raimondii HOM05D004728 ORTHO05D002375 9.7e-11 71.2 128 37.5
MD15G1377600 Malus domestica HOM05D004728 ORTHO05D002375 9.7e-11 71.2 98 35.7
AUR62027821 Chenopodium quinoa HOM05D059013 ORTHO05D002375 1.3e-10 70.9 111 35.1
HanXRQChr17g0556291 Helianthus annuus HOM05D004728 ORTHO05D002375 1.7e-10 70.5 154 29.2
Duzib116G0314 Durio zibethinus HOM05D004728 ORTHO05D002375 2.2e-10 70.1 164 31.7
Migut.C01096 Erythranthe guttata HOM05D004728 ORTHO05D002375 2.2e-10 70.1 120 35.0
Lj4A95G12 Lonicera japonica HOM05D004728 ORTHO05D002375 2.2e-10 70.1 99 39.4
MSTRG.1471 Avicennia marina HOM05D004728 ORTHO05D002375 3.7e-10 69.3 154 29.2
MD15G1317700 Malus domestica HOM05D004728 ORTHO05D002375 3.7e-10 69.3 99 35.4
Thecc.08G100900 Theobroma cacao HOM05D004728 ORTHO05D002375 3.7e-10 69.3 94 41.5
MSTRG.25397 Avicennia marina HOM05D004728 ORTHO05D002375 4.8e-10 68.9 160 27.5
Peaxi162Scf01184g00014 Petunia axillaris HOM05D004728 ORTHO05D002375 6.3e-10 68.6 192 29.2
SalBow7G1327 Salvia bowleyana HOM05D004728 ORTHO05D002375 6.3e-10 68.6 121 33.9
Duzib041G0412 Durio zibethinus HOM05D004728 ORTHO05D002375 8.2e-10 68.2 100 32.0
SGA_v2.0_scaffold24G10482 Striga asiatica HOM05D004728 ORTHO05D002375 1.1e-09 67.8 137 32.8
Gohir.A05G223100 Gossypium hirsutum HOM05D004728 ORTHO05D002375 1.8e-09 67.0 128 35.9
Glyma.02G210100 Glycine max HOM05D012119 ORTHO05D002375 4.1e-09 65.9 167 28.7
Cfa017900 Carpinus fangiana HOM05D004728 ORTHO05D002375 5.3e-09 65.5 186 30.1
Oeu000784.1 Olea europaea HOM05D004728 ORTHO05D002375 5.3e-09 65.5 125 33.6
Atru.chr13.1111 Acer truncatum HOM05D004728 ORTHO05D002375 6.9e-09 65.1 133 30.8
Cfa017899 Carpinus fangiana HOM05D004728 ORTHO05D002375 6.9e-09 65.1 167 32.9
Duzib147G1195 Durio zibethinus HOM05D004728 ORTHO05D002375 9.1e-09 64.7 185 31.9
FAN19G1066 Fragaria x ananassa HOM05D004728 ORTHO05D002375 9.1e-09 64.7 189 30.7
Migut.L00163 Erythranthe guttata HOM05D004728 ORTHO05D002375 1.2e-08 64.3 122 33.6
CiPaw.16G032300 Carya illinoinensis HOM05D004728 ORTHO05D002375 1.5e-08 63.9 114 33.3
FvH4_1g20180 Fragaria vesca HOM05D004728 ORTHO05D002375 1.5e-08 63.9 188 30.3
FvH4_5g36280 Fragaria vesca HOM05D004728 ORTHO05D002375 1.5e-08 63.9 137 30.7
FAN04G1034 Fragaria x ananassa HOM05D004728 ORTHO05D002375 1.5e-08 63.9 137 30.7
HanXRQChr05g0149651 Helianthus annuus HOM05D004728 ORTHO05D002375 2.0e-08 63.5 183 27.9
Prupe.6G194100 Prunus persica HOM05D004728 ORTHO05D002375 2.0e-08 63.5 88 34.1
ECA247G0078 Erigeron canadensis HOM05D004728 ORTHO05D002375 4.5e-08 62.4 186 28.0
FAN23G2235 Fragaria x ananassa HOM05D004728 ORTHO05D002375 5.9e-08 62.0 100 33.0
HanXRQChr13g0391971 Helianthus annuus HOM05D004728 ORTHO05D002375 5.9e-08 62.0 112 28.6
PSO761G0559 Papaver somniferum HOM05D015253 ORTHO05D002375 5.9e-08 62.0 109 31.2
CiPaw.16G032400 Carya illinoinensis HOM05D004728 ORTHO05D002375 7.7e-08 61.6 147 31.3
ECA247G3235 Erigeron canadensis HOM05D004728 ORTHO05D002375 7.7e-08 61.6 101 34.7
HanXRQChr17g0556311 Helianthus annuus HOM05D004728 ORTHO05D002375 7.7e-08 61.6 177 31.1
PGSC0003DMG400030843 Solanum tuberosum HOM05D021150 ORTHO05D002375 7.7e-08 61.6 120 30.0
Haze_18251 Corylus avellana HOM05D004728 ORTHO05D002375 1.0e-07 61.2 187 29.9
Potri.002G101600 Populus trichocarpa HOM05D004728 ORTHO05D002375 1.0e-07 61.2 197 28.4
DCAR_020003 Daucus carota HOM05D004728 ORTHO05D002375 1.3e-07 60.8 141 28.4
PSO700G0018 Papaver somniferum HOM05D015253 ORTHO05D002375 1.3e-07 60.8 125 30.4
QL02p002250 Quercus lobata HOM05D004728 ORTHO05D002375 1.3e-07 60.8 185 29.2
VMungo0647G1593 Vigna mungo HOM05D012119 ORTHO05D002375 1.3e-07 60.8 98 31.6
Nitab4.5_0007108g0040 Nicotiana tabacum HOM05D021150 ORTHO05D002375 1.7e-07 60.5 97 33.0
Nn1g05467 Nelumbo nucifera HOM05D004728 ORTHO05D002375 2.2e-07 60.1 164 26.2
Solyc04g074780.4 Solanum lycopersicum HOM05D021150 ORTHO05D002375 2.2e-07 60.1 120 30.0
CANSAT01G0157 Cannabis sativa HOM05D004728 ORTHO05D002375 2.9e-07 59.7 110 32.7
FAN13G0425 Fragaria x ananassa HOM05D004728 ORTHO05D002375 2.9e-07 59.7 138 30.4
Glyma.14G177800 Glycine max HOM05D012119 ORTHO05D002375 2.9e-07 59.7 93 33.3
Lalb_Chr09g0326871 Lupinus albus HOM05D007310 ORTHO05D002375 2.9e-07 59.7 131 27.5
MSTRG.1389 Avicennia marina HOM05D004728 ORTHO05D002375 3.8e-07 59.3 138 29.0
FAN26G1362 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.8e-07 59.3 188 29.3
Glyma.02G210000 Glycine max HOM05D012119 ORTHO05D002375 5.0e-07 58.9 99 31.3
Gorai.009G233200 Gossypium raimondii HOM05D004728 ORTHO05D002375 5.0e-07 58.9 93 31.2
QL02p002263 Quercus lobata HOM05D004728 ORTHO05D002375 5.0e-07 58.9 166 29.5
FAN28G1290 Fragaria x ananassa HOM05D004728 ORTHO05D002375 8.5e-07 58.2 100 31.0
SGA_v2.0_scaffold52G18993 Striga asiatica HOM05D004728 ORTHO05D002375 8.5e-07 58.2 120 27.5
MELO3C011050.2 Cucumis melo HOM05D039494 ORTHO05D002375 1.1e-06 57.8 117 28.2
Hma1.2p1_1180F.1_g264660 Hydrangea macrophylla HOM05D004728 ORTHO05D002375 1.4e-06 57.4 99 31.3
Lsat_1_v5_gn_1_2940 Lactuca sativa HOM05D004728 ORTHO05D002375 1.4e-06 57.4 101 33.7
Sabra02G0079600 Salix brachista HOM05D004728 ORTHO05D002375 1.4e-06 57.4 175 28.6
SGA_v2.0_scaffold48G17928 Striga asiatica HOM05D004728 ORTHO05D002375 1.4e-06 57.4 100 32.0
Lsat_1_v5_gn_1_2980 Lactuca sativa HOM05D004728 ORTHO05D002375 2.5e-06 56.6 160 26.2
Potri.002G101500 Populus trichocarpa HOM05D004728 ORTHO05D002375 2.5e-06 56.6 150 28.0
RcHm_v2.0_Chr2g0112251 Rosa chinensis HOM05D004728 ORTHO05D002375 2.5e-06 56.6 185 29.7
RcHm_v2.0_Chr2g0112261 Rosa chinensis HOM05D004728 ORTHO05D002375 2.5e-06 56.6 101 28.7
FAN08G2352 Fragaria x ananassa HOM05D004728 ORTHO05D002375 3.2e-06 56.2 104 31.7
Hund14099 Selenicereus undatus HOM05D004728 ORTHO05D002375 3.2e-06 56.2 101 30.7
unitig_0.g2111 Utricularia gibba HOM05D004728 ORTHO05D002375 5.5e-06 55.5 101 30.7
RcHm_v2.0_Chr7g0238181 Rosa chinensis HOM05D004728 ORTHO05D002375 7.2e-06 55.1 106 31.1
Sopen04g029740 Solanum pennellii HOM05D021150 ORTHO05D002375 7.2e-06 55.1 94 28.7
SGA_v2.0_scaffold14G07142 Striga asiatica HOM05D007310 ORTHO05D002375 7.2e-06 55.1 110 32.7


User provided reference genes

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