Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
Lj4A717G27 Lonicera japonica HOM05D003319 ORTHO05D003739 1.5e-172 609.8 393 100.0
Lj4A737G58 Lonicera japonica HOM05D003319 ORTHO05D003739 3.1e-165 585.5 415 93.5
Dinv42609 Davidia involucrata HOM05D003319 ORTHO05D003739 1.1e-48 198.4 287 50.5
Actinidia19627 Actinidia chinensis HOM05D003319 ORTHO05D003739 3.2e-37 160.2 246 46.3
vmacro04648 Vaccinium macrocarpon HOM05D003319 ORTHO05D003739 8.1e-33 145.6 241 46.9
Cc10_g15920 Coffea canephora HOM05D003319 ORTHO05D003739 1.4e-32 144.8 280 41.1
Hma1.2p1_0010F.1_g006630 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 3.4e-31 140.2 252 43.3
GSVIVG01009184001 Vitis vinifera HOM05D003319 ORTHO05D003739 1.9e-29 134.4 286 41.3
Rhsim07G0212100 Rhododendron simsii HOM05D003319 ORTHO05D003739 4.2e-29 133.3 243 44.9
Nn1g05581 Nelumbo nucifera HOM05D003319 ORTHO05D003739 2.4e-24 117.5 324 37.0
TAR628G1108 Trochodendron aralioides HOM05D003319 ORTHO05D003739 2.0e-23 114.4 267 39.7
TAR376G1177 Trochodendron aralioides HOM05D003319 ORTHO05D003739 2.9e-22 110.5 268 39.2
Nitab4.5_0001607g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.4e-21 107.5 262 39.3
CANSAT35G1730 Cannabis sativa HOM05D003319 ORTHO05D003739 9.3e-21 105.5 290 35.2
Aqoxy5G01378 Aquilegia oxysepala HOM05D003319 ORTHO05D003739 2.7e-20 104.0 213 41.3
Nitab4.5_0000354g0150 Nicotiana tabacum HOM05D003319 ORTHO05D003739 1.8e-19 101.3 266 38.3
DCAR_019315 Daucus carota HOM05D003319 ORTHO05D003739 3.0e-19 100.5 274 37.2
CAN.G806.11 Capsicum annuum HOM05D003319 ORTHO05D003739 8.7e-19 99.0 258 38.0
Peaxi162Scf00160g01038 Petunia axillaris HOM05D003319 ORTHO05D003739 1.6e-17 94.7 236 39.4
Sopen12g030000 Solanum pennellii HOM05D003319 ORTHO05D003739 1.6e-17 94.7 261 36.4
MSTRG.11807 Avicennia marina HOM05D003319 ORTHO05D003739 4.8e-17 93.2 228 36.0
Solyc12g087970.2 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.1e-16 92.0 240 37.1
Peaxi162Scf00454g00323 Petunia axillaris HOM05D003319 ORTHO05D003739 1.8e-16 91.3 269 36.4
Hma1.2p1_0125F.1_g058840 Hydrangea macrophylla HOM05D003319 ORTHO05D003739 2.4e-16 90.9 386 34.2
Prupe.1G532700 Prunus persica HOM05D003319 ORTHO05D003739 5.3e-16 89.7 273 33.3
Oeu018565.2 Olea europaea HOM05D003319 ORTHO05D003739 1.2e-15 88.6 234 35.5
QL01p017023 Quercus lobata HOM05D003319 ORTHO05D003739 1.5e-15 88.2 262 34.7
Atru.chr13.1006 Acer truncatum HOM05D003319 ORTHO05D003739 5.8e-15 86.3 271 35.1
MD15G1385800 Malus domestica HOM05D003319 ORTHO05D003739 1.3e-14 85.1 268 34.7
Nitab4.5_0000131g0210 Nicotiana tabacum HOM05D003319 ORTHO05D003739 2.9e-14 84.0 264 34.8
SalBow4G2315 Salvia bowleyana HOM05D003319 ORTHO05D003739 8.4e-14 82.4 259 32.8
QL09p017848 Quercus lobata HOM05D003319 ORTHO05D003739 2.4e-13 80.9 263 34.2
PGSC0003DMG400002048 Solanum tuberosum HOM05D003319 ORTHO05D003739 2.4e-13 80.9 249 34.1
Eucgr.F02154 Eucalyptus grandis HOM05D003319 ORTHO05D003739 1.6e-12 78.2 258 34.9
Ciclev10000622m.g Citrus clementina HOM05D003319 ORTHO05D003739 2.1e-12 77.8 269 31.2
Prupe.1G532600 Prunus persica HOM05D003319 ORTHO05D003739 2.1e-12 77.8 237 36.3
Cfa013800 Carpinus fangiana HOM05D003319 ORTHO05D003739 1.0e-11 75.5 269 34.9
Haze_22463 Corylus avellana HOM05D003319 ORTHO05D003739 1.8e-11 74.7 265 35.8
Potri.002G106500 Populus trichocarpa HOM05D003319 ORTHO05D003739 2.3e-11 74.3 251 33.9
Sabra02G0083800 Salix brachista HOM05D003319 ORTHO05D003739 2.3e-11 74.3 254 32.7
Actinidia19629 Actinidia chinensis HOM05D003319 ORTHO05D003739 3.9e-11 73.6 102 45.1
PGR042G0823 Punica granatum HOM05D003319 ORTHO05D003739 6.7e-11 72.8 225 30.7
Cfa009865 Carpinus fangiana HOM05D003319 ORTHO05D003739 8.7e-11 72.4 297 30.6
CiPaw.07G165000 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.1e-10 72.0 197 34.5
CSS0012387 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 3.3e-10 70.5 107 45.8
Hund04947 Selenicereus undatus HOM05D003319 ORTHO05D003739 4.3e-10 70.1 234 35.5
Nitab4.5_0005913g0020 Nicotiana tabacum HOM05D003319 ORTHO05D003739 5.6e-10 69.7 232 32.8
Haze_23237 Corylus avellana HOM05D003319 ORTHO05D003739 1.6e-09 68.2 297 31.0
TWI56G0998 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 1.6e-09 68.2 244 33.6
Manes.02G144600 Manihot esculenta HOM05D003319 ORTHO05D003739 3.7e-09 67.0 241 31.1
Sc26g0002970 Simmondsia chinensis HOM05D003319 ORTHO05D003739 3.7e-09 67.0 261 30.7
SGA_v2.0_scaffold193G40665 Striga asiatica HOM05D003319 ORTHO05D003739 3.7e-09 67.0 234 31.6
CAN.G475.23 Capsicum annuum HOM05D003319 ORTHO05D003739 4.8e-09 66.6 267 30.3
MBI16_g19592_MAGBIO Magnolia biondii HOM05D003319 ORTHO05D003739 4.8e-09 66.6 265 29.8
CSS0036226 Camellia sinensis var. sinensis HOM05D003319 ORTHO05D003739 1.1e-08 65.5 55 65.5
Duzib041G0541 Durio zibethinus HOM05D003319 ORTHO05D003739 1.4e-08 65.1 323 31.3
Solyc04g076360.4 Solanum lycopersicum HOM05D003319 ORTHO05D003739 1.4e-08 65.1 279 31.5
DCAR_012854 Daucus carota HOM05D003319 ORTHO05D003739 1.8e-08 64.7 189 37.6
Hund17284 Selenicereus undatus HOM05D003319 ORTHO05D003739 5.3e-08 63.2 219 33.8
ClCG08G011640 Citrullus lanatus HOM05D003319 ORTHO05D003739 6.9e-08 62.8 254 32.3
CiPaw.08G055800 Carya illinoinensis HOM05D003319 ORTHO05D003739 1.2e-07 62.0 263 32.3
CDE05G3064 Ceratophyllum demersum HOM05D003319 ORTHO05D003739 2.0e-07 61.2 211 28.9
CiPaw.14G112200 Carya illinoinensis HOM05D003319 ORTHO05D003739 5.8e-07 59.7 277 32.1
PSO478G0048 Papaver somniferum HOM05D003319 ORTHO05D003739 5.8e-07 59.7 212 32.1
Sed0025417 Sechium edule HOM05D003319 ORTHO05D003739 5.8e-07 59.7 130 40.0
TWI36G0459 Tripterygium wilfordii HOM05D003319 ORTHO05D003739 7.6e-07 59.3 218 33.0
Duzib093G0230 Durio zibethinus HOM05D003319 ORTHO05D003739 1.3e-06 58.5 304 30.6
Lsat_1_v5_gn_9_74001 Lactuca sativa HOM05D003319 ORTHO05D003739 1.3e-06 58.5 126 39.7
Oeu040388.1 Olea europaea HOM05D003319 ORTHO05D003739 1.3e-06 58.5 173 35.3
MD08G1198900 Malus domestica HOM05D003319 ORTHO05D003739 1.7e-06 58.2 209 33.5
PGSC0003DMG400009342 Solanum tuberosum HOM05D003319 ORTHO05D003739 2.9e-06 57.4 259 32.4
Thecc.08G071400 Theobroma cacao HOM05D003319 ORTHO05D003739 3.8e-06 57.0 276 30.1
MELO3C011083.2 Cucumis melo HOM05D003319 ORTHO05D003739 4.9e-06 56.6 229 34.5
CsaV3_2G030210 Cucumis sativus L. HOM05D003319 ORTHO05D003739 8.4e-06 55.8 230 32.6
RcHm_v2.0_Chr7g0235501 Rosa chinensis HOM05D003319 ORTHO05D003739 8.4e-06 55.8 255 29.4


User provided reference genes

Program Settings